Result of FASTA (ccds) for pF1KA1104
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KA1104, 1037 aa
  1>>>pF1KA1104 1037 - 1037 aa - 1037 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.3976+/-0.00101; mu= 16.3733+/- 0.061
 mean_var=79.8726+/-16.100, 0's: 0 Z-trim(105.3): 19  B-trim: 10 in 1/51
 Lambda= 0.143508
 statistics sampled from 8348 (8361) to 8348 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.622), E-opt: 0.2 (0.257), width:  16
 Scan time:  4.170

The best scores are:                                      opt bits E(32554)
CCDS59208.1 PITRM1 gene_id:10531|Hs108|chr10       (1037) 7034 1466.5       0
CCDS55699.1 PITRM1 gene_id:10531|Hs108|chr10       (1038) 7022 1464.1       0
CCDS55700.1 PITRM1 gene_id:10531|Hs108|chr10       ( 939) 3845 806.3       0


>>CCDS59208.1 PITRM1 gene_id:10531|Hs108|chr10            (1037 aa)
 initn: 7034 init1: 7034 opt: 7034  Z-score: 7863.1  bits: 1466.5 E(32554):    0
Smith-Waterman score: 7034; 99.7% identity (100.0% similar) in 1037 aa overlap (1-1037:1-1037)

               10        20        30        40        50        60
pF1KA1 MWRCGGRQGLCVLRRLSGGHAHHRAWRWNSNRACERALQYKLGDKIHGFTVNQVTSVPEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 MWRCGGRQGLCVLRRLSGGHAHHRAWRWNSNRACERALQYKLGDKIHGFTVNQVTSVPEL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA1 FLTAVKLTHDDTGARYLHLAREDTNNLFSVQFRTTPMDSTGVPHILEHTVLCGSQKYPCR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 FLTAVKLTHDDTGARYLHLAREDTNNLFSVQFRTTPMDSTGVPHILEHTVLCGSQKYPCR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA1 DPFFKMLNRSLSTFMNAFTASDYTLYPFSTQNPKDFQNLLSVYLDATFFPCLRELDFWQE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 DPFFKMLNRSLSTFMNAFTASDYTLYPFSTQNPKDFQNLLSVYLDATFFPCLRELDFWQE
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA1 GWRLEHENPSDPQTPLVFKGVVFNEMKGAFTDNERIFSQHLQNRLLPDHTYSVVSGGDPL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 GWRLEHENPSDPQTPLVFKGVVFNEMKGAFTDNERIFSQHLQNRLLPDHTYSVVSGGDPL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA1 CIPELTWEQLKQFHATHYHPSNARFFTYGNFPLEQHLKQIHEEALSKFQKIEPSTVVPAQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 CIPELTWEQLKQFHATHYHPSNARFFTYGNFPLEQHLKQIHEEALSKFQKIEPSTVVPAQ
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA1 TPWDKPREFQITCGPDSFATDPSKQTTVSVSFLLPDITDTFEAFTLSLLSSLLTSGPNSP
       :::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::
CCDS59 TPWDKPREFQITCGPDSFATDPSKQTTISVSFLLPDITDTFEAFTLSLLSSLLTSGPNSP
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA1 FYKALIESGLGTDFSPDVGYNGYTREAYFSVGLQGIVEKDIETVRSLIDRTIDEVVEKGF
       ::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::
CCDS59 FYKALIESGLGTDFSPDVGYNGYTREAYFSVGLQGIAEKDIETVRSLIDRTIDEVVEKGF
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA1 EDDRIEALLHKIEIQMKHQSTSFGLMLTSYIASCWNHDGDPVELLKLGNQLAKFRQCLQE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 EDDRIEALLHKIEIQMKHQSTSFGLMLTSYIASCWNHDGDPVELLKLGNQLAKFRQCLQE
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA1 NPKFLQEKVKQYFKNNQHKLTLSMRPDDKYHEKQAQVEATKLKQKVEALSPGDRQQIYEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 NPKFLQEKVKQYFKNNQHKLTLSMRPDDKYHEKQAQVEATKLKQKVEALSPGDRQQIYEK
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KA1 GLELRSQQSKPQDASCLPALKVSDIEPTIPVTELDVVLTAGDIPVQYCAQPTNGMVYFRA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 GLELRSQQSKPQDASCLPALKVSDIEPTIPVTELDVVLTAGDIPVQYCAQPTNGMVYFRA
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KA1 FSSLNTLPEELRPYVPLFCSVLTKLGCGLLDYREQAQQIELKTGGMSASPHVLPDDSHMD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 FSSLNTLPEELRPYVPLFCSVLTKLGCGLLDYREQAQQIELKTGGMSASPHVLPDDSHMD
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KA1 TYEQGVLFSSLCLDRNLPDMMQLWSEIFNNPCFEEEEHFKVLVKMTAQELANGIPDSGHL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 TYEQGVLFSSLCLDRNLPDMMQLWSEIFNNPCFEEEEHFKVLVKMTAQELANGIPDSGHL
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KA1 YASIRAGRTLTPAGDLQETFSGMDQVRLMKRIAEMTDIKPILRKLPRIKKHLLNGDNMRC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 YASIRAGRTLTPAGDLQETFSGMDQVRLMKRIAEMTDIKPILRKLPRIKKHLLNGDNMRC
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KA1 SVNATPQQMPQTEKAVEDFLRSIGRSKKERRPVRPHTVEKPVPSSSGGDAHVPHGSQVIR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 SVNATPQQMPQTEKAVEDFLRSIGRSKKERRPVRPHTVEKPVPSSSGGDAHVPHGSQVIR
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KA1 KLVMEPTFKPWQMKTHFLMPFPVNYVGECIRTVPYTDPDHASLKILARLMTAKFLHTEIR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 KLVMEPTFKPWQMKTHFLMPFPVNYVGECIRTVPYTDPDHASLKILARLMTAKFLHTEIR
              850       860       870       880       890       900

              910       920       930       940       950       960
pF1KA1 EKGGAYGGGAKLSHNGIFTLYSYRDPNTIETLQSFGKAVDWAKSGKFTQQDIDEAKLSVF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 EKGGAYGGGAKLSHNGIFTLYSYRDPNTIETLQSFGKAVDWAKSGKFTQQDIDEAKLSVF
              910       920       930       940       950       960

              970       980       990      1000      1010      1020
pF1KA1 STVDAPVAPSDKGMDHFLYGLSDEMKQAHREQLFAVSHDKLLAVSDRYLGTGKSTHGLAI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 STVDAPVAPSDKGMDHFLYGLSDEMKQAHREQLFAVSHDKLLAVSDRYLGTGKSTHGLAI
              970       980       990      1000      1010      1020

             1030       
pF1KA1 LGPENPKIAKDPSWIIR
       ::::::::::::::::.
CCDS59 LGPENPKIAKDPSWIIQ
             1030       

>>CCDS55699.1 PITRM1 gene_id:10531|Hs108|chr10            (1038 aa)
 initn: 7020 init1: 4523 opt: 7022  Z-score: 7849.7  bits: 1464.1 E(32554):    0
Smith-Waterman score: 7022; 99.6% identity (99.9% similar) in 1038 aa overlap (1-1037:1-1038)

               10        20        30        40        50        60
pF1KA1 MWRCGGRQGLCVLRRLSGGHAHHRAWRWNSNRACERALQYKLGDKIHGFTVNQVTSVPEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MWRCGGRQGLCVLRRLSGGHAHHRAWRWNSNRACERALQYKLGDKIHGFTVNQVTSVPEL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA1 FLTAVKLTHDDTGARYLHLAREDTNNLFSVQFRTTPMDSTGVPHILEHTVLCGSQKYPCR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 FLTAVKLTHDDTGARYLHLAREDTNNLFSVQFRTTPMDSTGVPHILEHTVLCGSQKYPCR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA1 DPFFKMLNRSLSTFMNAFTASDYTLYPFSTQNPKDFQNLLSVYLDATFFPCLRELDFWQE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 DPFFKMLNRSLSTFMNAFTASDYTLYPFSTQNPKDFQNLLSVYLDATFFPCLRELDFWQE
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA1 GWRLEHENPSDPQTPLVFKGVVFNEMKGAFTDNERIFSQHLQNRLLPDHTYSVVSGGDPL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 GWRLEHENPSDPQTPLVFKGVVFNEMKGAFTDNERIFSQHLQNRLLPDHTYSVVSGGDPL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA1 CIPELTWEQLKQFHATHYHPSNARFFTYGNFPLEQHLKQIHEEALSKFQKIEPSTVVPAQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 CIPELTWEQLKQFHATHYHPSNARFFTYGNFPLEQHLKQIHEEALSKFQKIEPSTVVPAQ
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA1 TPWDKPREFQITCGPDSFATDPSKQTTVSVSFLLPDITDTFEAFTLSLLSSLLTSGPNSP
       :::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::
CCDS55 TPWDKPREFQITCGPDSFATDPSKQTTISVSFLLPDITDTFEAFTLSLLSSLLTSGPNSP
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA1 FYKALIESGLGTDFSPDVGYNGYTREAYFSVGLQGIVEKDIETVRSLIDRTIDEVVEKGF
       ::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::
CCDS55 FYKALIESGLGTDFSPDVGYNGYTREAYFSVGLQGIAEKDIETVRSLIDRTIDEVVEKGF
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA1 EDDRIEALLHKIEIQMKHQSTSFGLMLTSYIASCWNHDGDPVELLKLGNQLAKFRQCLQE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 EDDRIEALLHKIEIQMKHQSTSFGLMLTSYIASCWNHDGDPVELLKLGNQLAKFRQCLQE
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA1 NPKFLQEKVKQYFKNNQHKLTLSMRPDDKYHEKQAQVEATKLKQKVEALSPGDRQQIYEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 NPKFLQEKVKQYFKNNQHKLTLSMRPDDKYHEKQAQVEATKLKQKVEALSPGDRQQIYEK
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KA1 GLELRSQQSKPQDASCLPALKVSDIEPTIPVTELDVVLTAGDIPVQYCAQPTNGMVYFRA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 GLELRSQQSKPQDASCLPALKVSDIEPTIPVTELDVVLTAGDIPVQYCAQPTNGMVYFRA
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KA1 FSSLNTLPEELRPYVPLFCSVLTKLGCGLLDYREQAQQIELKTGGMSASPHVLPDDSHMD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 FSSLNTLPEELRPYVPLFCSVLTKLGCGLLDYREQAQQIELKTGGMSASPHVLPDDSHMD
              610       620       630       640       650       660

               670       680       690       700       710         
pF1KA1 TYEQ-GVLFSSLCLDRNLPDMMQLWSEIFNNPCFEEEEHFKVLVKMTAQELANGIPDSGH
       :::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 TYEQVGVLFSSLCLDRNLPDMMQLWSEIFNNPCFEEEEHFKVLVKMTAQELANGIPDSGH
              670       680       690       700       710       720

     720       730       740       750       760       770         
pF1KA1 LYASIRAGRTLTPAGDLQETFSGMDQVRLMKRIAEMTDIKPILRKLPRIKKHLLNGDNMR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LYASIRAGRTLTPAGDLQETFSGMDQVRLMKRIAEMTDIKPILRKLPRIKKHLLNGDNMR
              730       740       750       760       770       780

     780       790       800       810       820       830         
pF1KA1 CSVNATPQQMPQTEKAVEDFLRSIGRSKKERRPVRPHTVEKPVPSSSGGDAHVPHGSQVI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 CSVNATPQQMPQTEKAVEDFLRSIGRSKKERRPVRPHTVEKPVPSSSGGDAHVPHGSQVI
              790       800       810       820       830       840

     840       850       860       870       880       890         
pF1KA1 RKLVMEPTFKPWQMKTHFLMPFPVNYVGECIRTVPYTDPDHASLKILARLMTAKFLHTEI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 RKLVMEPTFKPWQMKTHFLMPFPVNYVGECIRTVPYTDPDHASLKILARLMTAKFLHTEI
              850       860       870       880       890       900

     900       910       920       930       940       950         
pF1KA1 REKGGAYGGGAKLSHNGIFTLYSYRDPNTIETLQSFGKAVDWAKSGKFTQQDIDEAKLSV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 REKGGAYGGGAKLSHNGIFTLYSYRDPNTIETLQSFGKAVDWAKSGKFTQQDIDEAKLSV
              910       920       930       940       950       960

     960       970       980       990      1000      1010         
pF1KA1 FSTVDAPVAPSDKGMDHFLYGLSDEMKQAHREQLFAVSHDKLLAVSDRYLGTGKSTHGLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 FSTVDAPVAPSDKGMDHFLYGLSDEMKQAHREQLFAVSHDKLLAVSDRYLGTGKSTHGLA
              970       980       990      1000      1010      1020

    1020      1030       
pF1KA1 ILGPENPKIAKDPSWIIR
       :::::::::::::::::.
CCDS55 ILGPENPKIAKDPSWIIQ
             1030        

>>CCDS55700.1 PITRM1 gene_id:10531|Hs108|chr10            (939 aa)
 initn: 6161 init1: 3840 opt: 3845  Z-score: 4295.5  bits: 806.3 E(32554):    0
Smith-Waterman score: 6033; 92.9% identity (93.3% similar) in 985 aa overlap (53-1037:21-939)

             30        40        50        60        70        80  
pF1KA1 HRAWRWNSNRACERALQYKLGDKIHGFTVNQVTSVPELFLTAVKLTHDDTGARYLHLARE
                                     .:::::::::::::::::::::::::::::
CCDS55           MRNVALRRAAGPVCAEAAERRVTSVPELFLTAVKLTHDDTGARYLHLARE
                         10        20        30        40        50

             90       100       110       120       130       140  
pF1KA1 DTNNLFSVQFRTTPMDSTGVPHILEHTVLCGSQKYPCRDPFFKMLNRSLSTFMNAFTASD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 DTNNLFSVQFRTTPMDSTGVPHILEHTVLCGSQKYPCRDPFFKMLNRSLSTFMNAFTASD
               60        70        80        90       100       110

            150       160       170       180       190       200  
pF1KA1 YTLYPFSTQNPKDFQNLLSVYLDATFFPCLRELDFWQEGWRLEHENPSDPQTPLVFKGVV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 YTLYPFSTQNPKDFQNLLSVYLDATFFPCLRELDFWQEGWRLEHENPSDPQTPLVFKGVV
              120       130       140       150       160       170

            210       220       230       240       250       260  
pF1KA1 FNEMKGAFTDNERIFSQHLQNRLLPDHTYSVVSGGDPLCIPELTWEQLKQFHATHYHPSN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 FNEMKGAFTDNERIFSQHLQNRLLPDHTYSVVSGGDPLCIPELTWEQLKQFHATHYHPSN
              180       190       200       210       220       230

            270       280       290       300       310       320  
pF1KA1 ARFFTYGNFPLEQHLKQIHEEALSKFQKIEPSTVVPAQTPWDKPREFQITCGPDSFATDP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 ARFFTYGNFPLEQHLKQIHEEALSKFQKIEPSTVVPAQTPWDKPREFQITCGPDSFATDP
              240       250       260       270       280       290

            330       340       350       360       370       380  
pF1KA1 SKQTTVSVSFLLPDITDTFEAFTLSLLSSLLTSGPNSPFYKALIESGLGTDFSPDVGYNG
       :::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SKQTTISVSFLLPDITDTFEAFTLSLLSSLLTSGPNSPFYKALIESGLGTDFSPDVGYNG
              300       310       320       330       340       350

            390       400       410       420       430       440  
pF1KA1 YTREAYFSVGLQGIVEKDIETVRSLIDRTIDEVVEKGFEDDRIEALLHKIEIQMKHQSTS
       ::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::
CCDS55 YTREAYFSVGLQGIAEKDIETVRSLIDRTIDEVVEKGFEDDRIEALLHKIEIQMKHQSTS
              360       370       380       390       400       410

            450       460       470       480       490       500  
pF1KA1 FGLMLTSYIASCWNHDGDPVELLKLGNQLAKFRQCLQENPKFLQEKVKQYFKNNQHKLTL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 FGLMLTSYIASCWNHDGDPVELLKLGNQLAKFRQCLQENPKFLQEKVKQYFKNNQHKLTL
              420       430       440       450       460       470

            510       520       530       540       550       560  
pF1KA1 SMRPDDKYHEKQAQVEATKLKQKVEALSPGDRQQIYEKGLELRSQQSKPQDASCLPALKV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SMRPDDKYHEKQAQVEATKLKQKVEALSPGDRQQIYEKGLELRSQQSKPQDASCLPALKV
              480       490       500       510       520       530

            570       580       590       600       610       620  
pF1KA1 SDIEPTIPVTELDVVLTAGDIPVQYCAQPTNGMVYFRAFSSLNTLPEELRPYVPLFCSVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SDIEPTIPVTELDVVLTAGDIPVQYCAQPTNGMVYFRAFSSLNTLPEELRPYVPLFCSVL
              540       550       560       570       580       590

            630       640       650       660       670       680  
pF1KA1 TKLGCGLLDYREQAQQIELKTGGMSASPHVLPDDSHMDTYEQGVLFSSLCLDRNLPDMMQ
       :                                                           
CCDS55 T-----------------------------------------------------------
                                                                   

            690       700       710       720       730       740  
pF1KA1 LWSEIFNNPCFEEEEHFKVLVKMTAQELANGIPDSGHLYASIRAGRTLTPAGDLQETFSG
              :::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 -------NPCFEEEEHFKVLVKMTAQELANGIPDSGHLYASIRAGRTLTPAGDLQETFSG
                    600       610       620       630       640    

            750       760       770       780       790       800  
pF1KA1 MDQVRLMKRIAEMTDIKPILRKLPRIKKHLLNGDNMRCSVNATPQQMPQTEKAVEDFLRS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MDQVRLMKRIAEMTDIKPILRKLPRIKKHLLNGDNMRCSVNATPQQMPQTEKAVEDFLRS
          650       660       670       680       690       700    

            810       820       830       840       850       860  
pF1KA1 IGRSKKERRPVRPHTVEKPVPSSSGGDAHVPHGSQVIRKLVMEPTFKPWQMKTHFLMPFP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 IGRSKKERRPVRPHTVEKPVPSSSGGDAHVPHGSQVIRKLVMEPTFKPWQMKTHFLMPFP
          710       720       730       740       750       760    

            870       880       890       900       910       920  
pF1KA1 VNYVGECIRTVPYTDPDHASLKILARLMTAKFLHTEIREKGGAYGGGAKLSHNGIFTLYS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 VNYVGECIRTVPYTDPDHASLKILARLMTAKFLHTEIREKGGAYGGGAKLSHNGIFTLYS
          770       780       790       800       810       820    

            930       940       950       960       970       980  
pF1KA1 YRDPNTIETLQSFGKAVDWAKSGKFTQQDIDEAKLSVFSTVDAPVAPSDKGMDHFLYGLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 YRDPNTIETLQSFGKAVDWAKSGKFTQQDIDEAKLSVFSTVDAPVAPSDKGMDHFLYGLS
          830       840       850       860       870       880    

            990      1000      1010      1020      1030       
pF1KA1 DEMKQAHREQLFAVSHDKLLAVSDRYLGTGKSTHGLAILGPENPKIAKDPSWIIR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::.
CCDS55 DEMKQAHREQLFAVSHDKLLAVSDRYLGTGKSTHGLAILGPENPKIAKDPSWIIQ
          890       900       910       920       930         




1037 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Wed Nov  2 20:29:05 2016 done: Wed Nov  2 20:29:06 2016
 Total Scan time:  4.170 Total Display time:  0.100

Function used was FASTA [36.3.4 Apr, 2011]
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