GENSCAN 1.0	Date run:  2-Nov-116	Time: 19:38:47

Sequence gi568815588r:60771485_61011542 : 240058 bp : 39.30% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1497   1513   17  2  2   81  113    14 0.592   2.96
 1.02 Intr +   6879   7042  164  0  2   92  -51   165 0.089   1.70
 1.03 Intr +  13221  13377  157  1  1   92   91   107 0.799   9.55
 1.04 Intr +  14180  14303  124  2  1   84   93    62 0.995   5.97
 1.05 Intr +  20406  20569  164  2  2   51   70   127 0.997   5.05
 1.06 Intr +  20664  20805  142  0  1   69   99    94 0.996   8.03
 1.07 Term +  22393  22491   99  0  0  115   33    77 0.966   2.05
 1.08 PlyA +  22717  22722    6                               1.05

 2.04 PlyA -  22799  22794    6                               1.05
 2.03 Term -  36014  35821  194  0  2   73   50    61 0.277  -2.60
 2.02 Intr -  37109  36975  135  0  0   90  106    93 0.463  10.92
 2.01 Init -  38750  38600  151  2  1    5   54   150 0.536   3.55
 2.00 Prom -  45505  45466   40                              -2.55

 3.09 PlyA -  45931  45926    6                               1.05
 3.08 Term -  53652  53560   93  0  0   75   38    55 0.048  -3.95
 3.07 Intr -  55388  55292   97  1  1   86   84    76 0.027   6.09
 3.06 Intr -  68929  68854   76  2  1   40   70    61 0.007  -2.85
 3.05 Intr -  70336  70183  154  1  1   47   91    87 0.109   3.62
 3.04 Intr -  76954  76875   80  2  2   52   38    68 0.063  -3.45
 3.03 Intr -  77616  77484  133  0  1   99   60   151 0.900  12.70
 3.02 Intr -  84477  84296  182  1  2   43   76   102 0.443   3.17
 3.01 Init -  88023  87873  151  0  1   88   68    79 0.894   6.15
 3.00 Prom -  98126  98087   40                              -4.55

 4.12 PlyA -  99738  99733    6                               1.05
 4.11 Term - 100167  99998  170  1  2   51   49   227 0.816  12.16
 4.10 Intr - 100806 100701  106  0  1   73   94     7 0.906  -1.33
 4.09 Intr - 103009 102812  198  1  0   14   58   151 0.645   3.33
 4.08 Intr - 103558 103470   89  2  2  129   72    71 0.905   8.37
 4.07 Intr - 106574 106424  151  2  1   50  110    97 0.434   6.91
 4.06 Intr - 114746 114628  119  0  2   65   94   150 0.368  12.56
 4.05 Intr - 117701 116728  974  1  2   76  100  1018 0.808  91.49
 4.04 Intr - 121511 121326  186  1  0   77  121   155 0.362  15.58
 4.03 Intr - 135284 135153  132  1  0  106   77   116 0.840  11.14
 4.02 Intr - 139506 139403  104  0  2  108   97   135 0.997  14.45
 4.01 Init - 140046 139867  180  0  0   91   94   255 0.670  25.63
 4.00 Prom - 145053 145014   40                              -7.05

 5.04 PlyA - 145088 145083    6                               1.05
 5.03 Term - 150458 150250  209  0  2   57   37   118 0.663   0.12
 5.02 Intr - 151123 150981  143  0  2   57   84    97 0.406   5.28
 5.01 Init - 153729 153668   62  0  2   74  116    46 0.666   6.77
 5.00 Prom - 163657 163618   40                              -4.75

 6.08 PlyA - 164491 164486    6                               1.05
 6.07 Term - 167838 167590  249  0  0  118   44   110 0.633   4.32
 6.06 Intr - 173552 173341  212  0  2   88   86    87 0.327   6.21
 6.05 Intr - 186636 186503  134  2  2   63   98    38 0.016   1.67
 6.04 Intr - 203378 203291   88  0  1  119  100     5 0.120   2.91
 6.03 Intr - 218214 218099  116  2  2   94   83    30 0.086   2.27
 6.02 Intr - 225083 224951  133  0  1   65   14   128 0.009   1.88
 6.01 Init - 230065 229915  151  1  1   75   74   157 0.857  11.25
 6.00 Prom - 231920 231881   40                              -3.65

 7.05 PlyA - 232680 232675    6                               1.05
 7.04 Term - 233284 233016  269  2  2   22   48   160 0.227   0.07
 7.03 Intr - 235566 235387  180  1  0   61   82    76 0.705   3.22
 7.02 Intr - 236273 235798  476  1  2  -21   77   377 0.754  17.48
 7.01 Init - 236519 236374  146  2  2   79   86   137 0.973  12.24

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 180226 180148   79  1  1  105   50    92 0.973   8.37


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588r:60771485_61011542|GENSCAN_predicted_peptide_1|288_aa
MKELVSHPGRPAQRSWALIGCFESLRATRLVNPGPFSAVSLKLLALGFKAGSWKLSGERR
GTYGVVYKGRHKTTGQVVAMKKIRLESEEEGVPSTAIREISLLKELRHPNIVSLQDVLMQ
DSRLYLIFEFLSMDLKKYLDSIPPGQYMDSSLVKVVTLWYRSPEVLLGSARYSTPVDIWS
IGTIFAELATKKPLFHGDSEIDQLFRIFRALGTPNNEVWPEVESLQDYKNTFPKWKPGSL
ASHVKNLDENGLDLLSKMLIYDPAKRISGKMALNHPYFNDLDNQIKKM

>gi568815588r:60771485_61011542|GENSCAN_predicted_CDS_1|867_bp
atgaaggagcttgtaagccacccgggaaggcctgcccagcgtagctgggctctgattggc
tgctttgaaagtctacgggctacccgattggtgaatccggggccctttagcgcggtgagt
ttgaaactgctcgcacttggcttcaaagctggctcttggaaattgagcggagagcgacgc
ggtacctatggagttgtgtataagggtagacacaaaactacaggtcaagtggtagccatg
aaaaaaatcagactagaaagtgaagaggaaggggttcctagtactgcaattcgggaaatt
tctctattaaaggaacttcgtcatccaaatatagtcagtcttcaggatgtgcttatgcag
gattccaggttatatctcatctttgagtttctttccatggatctgaagaaatacttggat
tctatccctcctggtcagtacatggattcttcacttgttaaggtagtaacactctggtac
agatctccagaagtattgctggggtcagctcgttactcaactccagttgacatttggagt
ataggcaccatatttgctgaactagcaactaagaaaccacttttccatggggattcagaa
attgatcaactcttcaggattttcagagctttgggcactcccaataatgaagtgtggcca
gaagtggaatctttacaggactataagaatacatttcccaaatggaaaccaggaagccta
gcatcccatgtcaaaaacttggatgaaaatggcttggatttgctctcgaaaatgttaatc
tatgatccagccaaacgaatttctggcaaaatggcactgaatcatccatattttaatgat
ttggacaatcagattaagaagatgtag

>gi568815588r:60771485_61011542|GENSCAN_predicted_peptide_2|159_aa
MCLLDGCNGDTSWGKSGSHKLKMLEHHRSGSLNDLLQESHPAIVFIVQGCPRRGTGLQEA
VMMSGIWENGWEVTVEKSSNNKIKIKWILQVIRKESRMHSFCLACNLELLGPELSQIPPH
ILSGALLQRPSGSGQVSYMLKDQERQQGEAVQIGKMESA

>gi568815588r:60771485_61011542|GENSCAN_predicted_CDS_2|480_bp
atgtgcctgctggatggctgcaatggagacacctcctggggaaagtctggaagccacaag
ttgaagatgctagagcatcaccggtctggatccctgaatgatttgctgcaggaaagccat
cctgccatcgtttttattgtccagggctgtcctagaagaggaacagggctacaggaagca
gtgatgatgtctggcatttgggaaaatggctgggaagtaactgtggagaagagctccaac
aacaaaataaaaataaaatggattctccaagtaataagaaaagaaagtagaatgcacagc
ttctgccttgcctgcaatttagaactcctgggaccagaactcagccaaattcctccccat
atcttatcaggagctctccttcaaaggccttcagggtctgggcaggtatcatatatgctt
aaagatcaagaaaggcaacagggagaagcagtgcaaattggcaaaatggagagtgcttag

>gi568815588r:60771485_61011542|GENSCAN_predicted_peptide_3|321_aa
MAFKVVVSHLGDIIEKQLGWLGSIIFKLLKLLNQEGAPPGEVTILMTKTLVWPSEATSRT
PLIYTYSSLWSSSQPGWCQQDTHWTRLLSFSLPCLEEVQKGPGLSGLGLQELLSPHFSKC
GPWTSRISITWERARDAASQAPLRPAGPEVAFKIPGRTQQKLQTAAVPHEARARLTQVIL
EQLLSYLTIPVSWRQLSLYASGRSSRTENLQVLAPPPPPAPCQQALNEAVLFSDTREMLL
PIPRSVSSNSPVSEHHEILYHQNTDSPPQAACIPESETRLPVDGRVRPDFGGSEWAGKLF
IINVLSNSDALGSPCSVRHQP

>gi568815588r:60771485_61011542|GENSCAN_predicted_CDS_3|966_bp
atggcctttaaggtggttgtttctcatctgggagatattatagagaaacagctgggttgg
ttagggtcgataatcttcaaattgttgaaactgctaaatcaagagggtgctccacctgga
gaggtgaccatcttaatgaccaaaaccttggtgtggcccagtgaagccacaagtcggaca
cccctgatttacacttactcctccctgtggagcagcagccaacctggttggtgtcagcag
gatactcactggaccaggttgctcagtttctctctcccttgccttgaggaagtgcagaaa
gggccaggactctctgggttgggacttcaagagcttttaagccctcacttctcaaagtgt
ggtccatggaccagccgcatcagcatcacgtgggagcgtgctagagatgcagcttctcag
gccccactcagacctgctggaccagaagttgcatttaagatcccaggaagaacacagcaa
aaattgcaaacagctgctgtccctcatgaggcaagagccagactgacccaggtcatcctg
gagcagctactgtcctatttaacaatacctgtttcatggagacaactgtctctctacgct
tctggaagaagttctaggacagaaaatctccaggtcttggccccgcccccgccccctgct
ccttgtcagcaggccctcaatgaagctgtgttattctcagacacccgggaaatgcttctc
cccatccctcgttctgtgtcctcaaattcacctgtatctgaacaccatgaaatcttgtat
caccaaaacactgattctcctcctcaagctgcctgcattccagaatctgagaccagatta
cctgtggatggaagagtaaggccagactttgggggtagcgaatgggctggaaaattgttc
atcatcaatgtcctctccaattctgacgctctgggatccccctgctcagttaggcatcaa
ccataa

>gi568815588r:60771485_61011542|GENSCAN_predicted_peptide_4|802_aa
MDYERPNVETIKCVVVGDNAVGKTRLICARACNTTLTQYQLLATHVPTVWAIDQYRVCQE
VLERSRDVVDEVSVSLRLWDTFGDHHKDRRFAYGRSENLQTLNKAYVADSDNNYSLIRVP
QAPGLCYVLHVSCPASLLWSDVVVLCFSIANPNSLNHVKSMWYPEIKHFCPRTPVILVGC
QLDLRYADLEAVNRARRPLARPIKRGDILPPEKGREVAKELGLPYYETSVFDQFGIKDVF
DNAIRAALISRRHLQFWKSHLKKVQKPLLQAPFLPPKAPPPVIKIPECPSMGTNEAACLL
DNPLCADVLFILQDQEHIFAHRIYLATSSSKFYDLFLMECEESPNGSEGACEKEKQSRDF
QGRILSVDPEEEREEGPPRIPQADQWKSSNKSLVEALGLEAEGAVPETQTLTGWSKGFIG
MHREMQVNPISKRMGPMTVVRMDASVQPGPFRTLLQFLYTGQLDEKEKDLVGLAQIAEVL
EMFDLRMMVENIMNKEAFMNQEITKAFHVRKANRIKECLSKGTFSDVTFKLDDGAISAHK
PLLICSCEWMAAMFGGSFVESANSEVYLPNINKISMQAVLDYLYTKQLSPNLDLDPLELI
ALANRFCLPHLVALAEQHAVQELTKAATSGVGIDGEVLSYLELAQTCPLLPEKVQDSALA
SPWSNFPKAQAKLCLTFLIHRKWDDSLHPTNLTDYSENEVGENVQERALKSFHNAHQLAA
WCLHHICTNYNSVCSKFRKEIKSKSADNQEYFERHRWPPVWYLKEEDHYQRVKREREKED
IALNKHRSRRKWCFWNSSPAVA

>gi568815588r:60771485_61011542|GENSCAN_predicted_CDS_4|2409_bp
atggactacgaaagacccaacgttgaaactatcaaatgtgtggtcgtgggtgacaatgcc
gtggggaagacgcgcttgatctgtgccagggcgtgcaacaccacactcacgcagtatcag
ctgctggccacccacgtgccaacagtgtgggcgattgaccagtaccgcgtgtgccaggag
gtcttggagcgttctcgggatgttgttgatgaagtgagtgtttctctcaggctttgggat
acttttggtgatcatcacaaagacagacgctttgcatatggcaggtcagagaaccttcag
acactgaataaagcctatgttgctgacagtgataacaactacagtttaatcagggtgccc
caggcaccaggcctgtgctacgtgctgcatgtgtcctgtcctgcttcactcttgtggtct
gatgttgtggtcctctgtttttcgattgctaatcccaattccctaaatcatgtgaaaagc
atgtggtatccagaaatcaagcacttttgccctcgaacacccgttatccttgttgggtgc
cagcttgatctccgctatgccgacctggaagctgttaatcgagccaggcgcccgttagca
aggcccataaagagaggggatattttgcccccagaaaaaggccgagaggtagcaaaggaa
cttggcttaccatactatgaaacaagcgtgtttgaccagtttggtatcaaggatgtgttt
gacaatgcaatccgagcagcgctgatttcccgcaggcacctgcaattctggaaatcccac
ctaaagaaagtccagaaacctttacttcaggcacccttcctacctccaaaagcccctcca
ccggtcatcaaaattccagagtgtccttccatggggacaaatgaagctgcctgtttactg
gacaatcctctatgtgccgatgttctgttcatccttcaggaccaggaacacatctttgca
catcgaatttacctcgctacctcttcttccaaattttatgatctgtttttaatggaatgt
gaagaatccccaaatgggagtgaaggagcctgtgagaaagagaagcagagcagagatttc
caggggcggatattgagtgtcgacccagaggaagaaagggaggagggcccgcctaggatt
cctcaggccgaccagtggaagtcttcaaacaagagcctggtggaggctctggggctggaa
gccgagggtgcagttcctgagacacagactttgaccggatggagtaaggggttcattggc
atgcacagggaaatgcaagtcaaccccatttcaaagcggatggggcccatgactgtggtc
aggatggacgcttcagtccagccaggcccttttcggaccctgctccagtttctttatacg
ggacaactggatgaaaaggaaaaggatttggtgggcctggctcagatcgcagaggtcctc
gagatgttcgatttgaggatgatggtggaaaacatcatgaacaaggaagccttcatgaac
caggagattacgaaagcctttcacgtaaggaaagccaatcggataaaagagtgtctcagc
aagggaacgttctcggacgtgacatttaaattggacgatggagccatcagtgcccacaag
ccgctgctgatctgtagctgtgagtggatggcagccatgttcggggggtcatttgtggaa
agtgccaacagtgaggtgtatctcccgaacataaacaagatatcaatgcaagcagtattg
gattatctctataccaagcagttgtctcctaacttggatctggacccgctggaattaatt
gccttggcaaacagattttgcctgccacacttggttgcacttgcagaacagcatgccgtt
caggagttgaccaaagccgccacgagtggcgtgggcattgacggagaagtgctctcttac
ttggaattggctcagacttgccctcttcttccagagaaggtccaagattcagctttagct
tcaccatggagtaacttccccaaagcacaagctaaactctgcctcactttcctcatccac
aggaaatgggatgacagtttgcatcctaccaaccttacagattattctgagaatgaagtg
ggagagaatgttcaagagcgagcactgaagagttttcacaatgcccaccagttggccgcc
tggtgtttgcaccacatctgcaccaactacaacagtgtatgctccaagttccgtaaggaa
atcaaatcaaaatctgcagacaaccaggaatacttcgagcggcaccgctggccccctgtg
tggtacctgaaggaagaagatcactaccagcgtgtgaaaagggaacgagagaaggaagat
attgcactaaataagcatcgctcaagacgaaagtggtgcttctggaattcatctccagca
gtggcctga

>gi568815588r:60771485_61011542|GENSCAN_predicted_peptide_5|137_aa
MVLASPQLLERPQEAYNHGGRLWASVVKNVSLLPGPILFPVDMAVCWSSVVLSFGSMEVN
LAEILPVSGCGLWSLVAPMVTDALPVREQWLVQCHLSNTALVMGHTDVPQGVSLTNCRLS
HTLLLSRPQGLMISHQR

>gi568815588r:60771485_61011542|GENSCAN_predicted_CDS_5|414_bp
atggtgctggcatctcctcagcttctggagagacctcaggaagcttataatcatggtgga
agattatgggcatctgtggtgaagaatgtctccctacttcctgggccaattcttttcccc
gtggacatggcagtctgctggtcatcagtggtgttatcatttggctccatggaagtgaat
ttggcggaaatccttccagtttctgggtgtggcctttggtctctggtggctcccatggtt
actgatgcacttcctgttagggagcaatggttggtgcaatgccatctgtcaaacactgct
cttgtgatgggccacacagatgtccctcaaggtgtttctctcaccaactgcaggcttagc
cacacgctgctgctttcaaggccacagggcttaatgatcagtcaccagagatag

>gi568815588r:60771485_61011542|GENSCAN_predicted_peptide_6|360_aa
MQAGEAAEVGEGGVGGAGRGRRCPGGFTKPAPASAARRDPEPPRELPASPGCRSSRGHQV
IYSGGHQVIYNGGQRGKFLRLFSLGWKGLEGDCENTKVGNLPRVGAKWTSLSQHRKQGAK
AEVRLNCCELSLGEKRTNVCKKLQSVYHYPQRNKVSSAGSCNHLTLAVLCTESFHHMSRG
PNYWLFNEINCGVCICSGRHSQVVSAHKLTVSLEEREVSVRRHGLSWKTKTAHGGHSQFH
LLTQPFAGGYKSPLYPGRGQRCVPTPPGGTPPAKSRRKDRNWKIGKKTPKMMDVCVSMTA
TFSRCPRTLLSSDTFLSSVIKYITMPLIRLYPLKNELASFTKKAMPIGLEESNYMSPLCT

>gi568815588r:60771485_61011542|GENSCAN_predicted_CDS_6|1083_bp
atgcaggcgggggaggcggccgaggtgggagagggcggggtcggcggggcggggcggggt
cggcgctgtcccggcggctttacaaagcccgcgccagcctcggccgcccggcgggaccca
gagccgccgcgggagcttccagcgtccccaggctgccgaagctctcggggacatcaggtc
atctacagtgggggacatcaggtcatctacaatggtggacagcgaggcaaattcctcagg
ctattttctctgggctggaaaggtctggaaggtgactgtgaaaacaccaaagttggaaac
ctacccagagtaggggcaaagtggacgtcactgtctcagcacaggaaacaaggtgctaag
gcagaggttagactgaactgctgtgagctgtcactgggtgaaaagagaactaatgtttgt
aagaaattacagtcagtttaccactatcctcagagaaataaagtctcttctgcaggttcc
tgcaaccatttgacgttggctgttttgtgtactgagtcttttcaccacatgtcccgagga
cccaattactggctttttaatgagattaactgtggggtctgtatctgttctggcagacac
tcacaagtggtgtctgctcacaaactcacggtcagcctggaagagagagaagtttctgtg
aggaggcatgggctgtcttggaagaccaagacagcccatggaggccacagtcaatttcac
ctcctcactcagccatttgcaggaggttataaatcacctctgtacccgggtcggggtcag
cggtgcgtccctacgccccctggggggacccctcccgccaagtcgcggaggaaggacaga
aattggaaaattggcaaaaagacgccaaaaatgatggatgtgtgtgtgagtatgactgcc
actttttccagatgtcccaggacactcctgtcttcagatactttcttgagctctgtcatc
aaatacatcaccatgcctctgatcaggctttatccactaaagaacgaattagcaagtttt
acaaagaaagcgatgccaataggtctagaagaaagcaattacatgtctccactctgcacc
tga

>gi568815588r:60771485_61011542|GENSCAN_predicted_peptide_7|356_aa
MRRNQSRKPENSKNQNASSHPKKHNSSPAREQSCMENEFDELTEVGFRRITSEEKSLNDL
MELKTTVQELREAYTSFNSQFDQPEERVSVIEDQINEIKREDKIKNKRVKRNEQSLQEIW
DYVKRPNLRLIGVPESDGENGTKLENTLQDIIQENFPNLARQANIQIQKTQRTPQRYSLR
RATSRHLIVRFTKIEMKKGMLREAREKGAPEGSTKHGREQPVPGTAKTCQIVKTIDAIKK
LYQLMGDVTSWHRDGGIKFTHNNINLKSDKQLQQSLRIQNQCAKITSIPIYQEQTNREPN
HELTPIHNYYKENKIPRNPTYKGCEGLLQGELQTTAQQNKRRHKQMEEHPMLMDRK

>gi568815588r:60771485_61011542|GENSCAN_predicted_CDS_7|1071_bp
atgaggagaaaccagagcagaaagcctgaaaattccaaaaaccagaatgcctcttctcat
ccaaagaaacacaactcctcaccagcaagggagcaaagctgcatggagaatgagtttgac
gagctgacagaagtaggcttcagaagaataaccagtgaagagaagagcttaaatgacctg
atggagctgaaaaccacagtacaagaactgcgtgaagcatacacaagcttcaatagccaa
tttgatcaaccagaagaaagggtatcagtgattgaggatcaaattaatgaaataaagaga
gaagacaagattaaaaataaaagagtgaaaagaaacgaacaaagcctccaagaaatatgg
gactatgtgaaaagaccaaatctacgtttgattggtgtacctgaaagtgatggggagaat
ggaaccaagttagaaaacactcttcaggatattatccaggagaacttccccaacctagca
aggcaggccaacattcaaattcagaaaacacagagaacaccacaaagatactccttgaga
agagcaacctcaagacacctaattgtcagattcaccaagattgaaatgaagaaaggaatg
ttgagggaagccagagagaaaggagctcctgaaggaagcactaaacatggaagggaacaa
ccagtaccaggcactgcaaaaacatgccaaattgtaaagaccatcgatgctataaagaaa
ctgtatcaattaatgggtgacgtaaccagctggcatcgtgatggcgggatcaaattcaca
cataacaatattaaccttaaatctgataagcaacttcagcaaagtctcaggatacaaaat
caatgtgcaaaaatcacaagcattcctatataccaagaacagacaaacagagagccaaat
catgagttaactcccattcacaattactacaaagagaataaaatacctaggaatccaact
tacaagggatgtgaaggacttcttcaaggagaactacaaacaactgctcaacaaaataaa
agacgacacaaacaaatggaagaacatcccatgctcatggataggaagtga