GENSCAN 1.0	Date run:  2-Nov-116	Time: 19:26:33

Sequence gi568815585r:36204368_36435830 : 231463 bp : 38.98% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.08 PlyA -     52     47    6                               1.05
 1.07 Term -  10511  10292  220  1  1  113   49   181 0.777  12.23
 1.06 Intr -  11442  11324  119  0  2   76  -26   123 0.672  -1.96
 1.05 Intr -  27354  27037  318  0  0   72   66    87 0.056   0.13
 1.04 Intr -  30286  30227   60  1  0  108   70    66 0.674   4.81
 1.03 Intr -  49489  49436   54  1  0   96   93    82 0.991   7.76
 1.02 Intr -  49776  49678   99  0  0   61   76   121 0.992   7.59
 1.01 Init -  51705  51496  210  0  0   73   23   201 0.427  10.93
 1.00 Prom -  51944  51905   40                              -8.05

 2.00 Prom +  52073  52112   40                              -9.55
 2.01 Init +  52123  52209   87  0  0   84   35    49 0.108  -0.11
 2.02 Term +  54707  55018  312  1  0   41   47   286 0.497  13.82
 2.03 PlyA +  58124  58129    6                               1.05

 3.00 Prom +  59004  59043   40                              -6.95
 3.01 Sngl +  65310  65660  351  2  0   46   43   256 0.989  12.70
 3.02 PlyA +  66241  66246    6                               1.05

 4.08 PlyA -  68073  68068    6                              -0.45
 4.07 Term -  68596  68469  128  2  2   46   49   141 0.337   3.46
 4.06 Intr -  79335  79225  111  1  0   96   87    88 0.991   8.93
 4.05 Intr -  81733  81658   76  1  1    6   87    92 0.789  -0.93
 4.04 Intr -  82440  82369   72  0  0  111   92    -5 0.517   0.88
 4.03 Intr -  84995  84861  135  2  0   44   36   106 0.539   0.84
 4.02 Intr -  86498  86414   85  1  1   63   66    93 0.846   3.50
 4.01 Init -  93352  93270   83  1  2   73   81   173 0.969  15.59
 4.00 Prom -  99184  99145   40                              -4.95

 5.11 PlyA -  99373  99368    6                               1.05
 5.10 Term - 100265  99998  268  1  1   73   45   348 0.998  22.98
 5.09 Intr - 107868 107778   91  1  1   56  108    53 0.866   2.23
 5.08 Intr - 108110 107952  159  0  0   34   87   157 0.768   9.24
 5.07 Intr - 110054 109860  195  0  0   35   38   246 0.770  12.76
 5.06 Intr - 112671 112590   82  0  1  117   45    64 0.309   3.29
 5.05 Intr - 112994 112847  148  1  1   40   34    35 0.324  -7.38
 5.04 Intr - 114579 114461  119  0  2   10  109   160 0.479   8.64
 5.03 Intr - 125150 124995  156  2  0   66   61   184 0.905  12.79
 5.02 Intr - 127229 127032  198  2  0   77   93   164 0.961  14.43
 5.01 Init - 131463 130654  810  0  0   92  115   536 0.945  51.45
 5.00 Prom - 145975 145936   40                              -4.65

 6.00 Prom + 152308 152347   40                              -4.55
 6.01 Init + 155952 156002   51  2  0   74   94    35 0.197   3.91
 6.02 Intr + 161133 161237  105  2  0   18   50   116 0.106   0.29
 6.03 Intr + 161363 161476  114  1  0  102   94    11 0.169   2.82
 6.04 Intr + 178721 178864  144  1  0  100   61    31 0.022   1.16
 6.05 Intr + 200727 200794   68  2  2   54   92    57 0.149  -0.52
 6.06 Term + 203786 204092  307  2  1   25   43   747 0.200  57.50
 6.07 PlyA + 204781 204786    6                               1.05

 7.00 Prom + 221639 221678   40                              -5.05
 7.01 Init + 222283 222360   78  0  0   62  101    39 0.732   3.71
 7.02 Intr + 226243 226337   95  0  2   30   75   109 0.550   1.64
 7.03 Term + 226470 226704  235  0  1   77   39   227 0.812  11.51
 7.04 PlyA + 226722 226727    6                              -1.95

 8.00 Prom + 226857 226896   40                              -9.45
 8.01 Init + 227814 227915  102  2  0  116   51    73 0.769   6.34
 8.02 Intr + 228666 228854  189  2  0   77   95   244 0.486  22.86

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 153004 153274  271  1  1   55   38   198 0.813   5.47
S.002 Sngl + 219017 219181  165  1  0   46   41   172 0.822   2.73


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585r:36204368_36435830|GENSCAN_predicted_peptide_1|359_aa
MEATLAGKEGEGKAGAGQDRNETAHMNIGVGQLTSLAHTVLSALHLVKGGKRLRGGRGLG
SEWGLGKQDIESLNTLLKQLEEEKKTLESQVKYYALKLEQESKAYQKINNERRTYLAEMS
QAFIVSDEKSVVTPIEDPFYRKVFRKLKWPLTLSSQSVRKVGFLVPHKSLMEKGSHGNLR
KGIHGSVLSSLDRTFHIRAPDMLLPAFELPALKLYASVAVEMMCYNRRLPKICTVSRNYS
QEGFRVKNCRVSQLYFCMPPGSKSDPQDTAPAAQEPGDLPRDRLQRWRRSGSEYAGLSVV
RAALGRGLGVRSQLVTRSPKGPQDSLSSPRGQAPDPGSALTPQSGLLLPHAPELATGPL

>gi568815585r:36204368_36435830|GENSCAN_predicted_CDS_1|1080_bp
atggaagcaacgcttgcaggcaaagaaggagaaggaaaggctggagcaggccaagacagg
aatgaaacagcccacatgaatattggagtgggacaactgacctccctggcccacaccgtg
ctgagcgccctgcatctggtcaagggtggtaagagactacgtggaggacgaggacttggc
agtgaatggggattggggaagcaggacatagaatccttaaacacattacttaaacagcta
gaagaagaaaagaagactcttgaaagtcaagtgaaatactatgcacttaaactggaacaa
gaatcaaaggcttaccagaagatcaacaatgaacgccgtacatacctagctgaaatgtct
caggccttcatagtttctgatgagaaatcagttgttactcctattgaagatcccttttac
agaaaagtttttaggaaattgaagtggcctttaactctctcaagtcagagtgtaaggaag
gttggctttttagtgccacataagtcattaatggaaaaaggatctcatggaaatctaaga
aaaggaattcacggatctgtcttatcctcattagacagaactttccacattagggcacct
gacatgctgcttccagcctttgaattacctgcccttaagctgtatgcctctgtagcggtg
gagatgatgtgctataacagaaggctgcctaagatttgcactgtaagcagaaactattca
caggaaggtttccgtgtgaagaactgtagagtatcacagctgtatttttgcatgcccccg
ggatctaaatcggacccccaggacacagcaccagctgctcaggaaccaggagacttgccc
agggaccgcctgcagagatggcggcgcagtgggagtgagtacgcggggcttagtgtcgtg
agagctgccctgggaaggggacttggagtgcgcagtcagctagtgacgcggtctcctaag
ggcccccaggacagcttgagtagcccccgcgggcaggcccccgacccgggttccgcgttg
acccctcagagcggcctgctgctcccccacgcgccagaactggcgacagggccactttaa

>gi568815585r:36204368_36435830|GENSCAN_predicted_peptide_2|132_aa
MEETAPIINDLHLVLPLTCGNITIQDDIWKAGSRDSQDPAPSDTTVYVGSRTKVMRAAMI
VRAESRMAELEGSVLTPGDELSQLVPVSPSEPPSCRGFPQEHYELSPRKRFLVSHCYRME
SLDCQLSKFLVY

>gi568815585r:36204368_36435830|GENSCAN_predicted_CDS_2|399_bp
atggaggaaacagcccccataatcaatgacctccatctggtcttgcccttgacatgtggg
aatattacaattcaagatgacatttggaaggcaggctccagggactcccaggatcctgct
ccctcggataccacagtctatgtaggcagcaggactaaagtgatgagagccgccatgata
gtgagggccgagagcaggatggcggaattagaaggcagcgtcctgacccctggcgatgag
ctgagtcaattggtccctgtctccccctcagagccaccatcttgtcgtggcttccctcag
gaacattatgagctctcccccaggaagcgcttcttggtttcccattgttaccggatggaa
agtcttgactgccagttgtccaagttcttggtgtattga

>gi568815585r:36204368_36435830|GENSCAN_predicted_peptide_3|116_aa
MIISTDAEKALDKIQHHFVIKTLNKLDIEGTYFKIIKTTHDRPTANIILNGEKLKAFSLR
TGTRQGCRHAPLLLNIVLEVLARAFGQERNKGHPNWKRGIRTIAVFRRHDRIPRKS

>gi568815585r:36204368_36435830|GENSCAN_predicted_CDS_3|351_bp
atgatcatctcaacagatgcagaaaaagcactggacaaaatccagcatcactttgtgata
aaaactctcaacaaactagacatagaagggacttacttcaaaataataaaaaccacacat
gacagacccacagccaacatcatactgaacggggagaagttgaaagcattctccctgaga
acaggaacaagacaaggctgccgacatgcaccactcctattgaatatagttctggaagtc
ctagccagagcattcgggcaagagagaaataaagggcatccaaattggaaaagaggaatc
cgaactattgctgttttcagacgacatgatcgtatacctagaaaatcctaa

>gi568815585r:36204368_36435830|GENSCAN_predicted_peptide_4|229_aa
MKEERNYNFDGVSTNRLKQQLLEEVRKNGTPIAKELRVKDLNPIKRFRPDGSGGEQTFKI
KHFSIRPQQWNQRKKVTEANLEAEGESCHLRPSQGEKKLKAGEPQHPRTEGCGMNPSHFL
KSPVKKPDWQAQALEHTALTIRDTKIVTSNCSEWKTRYETQLELNDELEKQIVYLKEKVE
KIHGNSSGMEEGGGEKGAENWETVEDEHMEQLVTGTPLPSHAAGILSFS

>gi568815585r:36204368_36435830|GENSCAN_predicted_CDS_4|690_bp
atgaaggaagagagaaactacaacttcgacggtgtgagcaccaaccgcctgaaacagcag
ttgctggaagaagtccgcaagaatgggacccctattgccaaggaacttagagtcaaagac
ttaaatccaattaaacgttttaggccagatgggagtggaggtgagcagacctttaagata
aaacattttagcatcaggccacaacagtggaaccagaggaaaaaagttacagaagctaat
ttagaagctgaaggagagagctgtcatctcagaccttctcagggggagaaaaagctgaaa
gcaggagagcctcagcaccctagaactgaagggtgtgggatgaatccctcccatttcctc
aagtcaccagtcaagaaaccagactggcaggctcaggccctggagcatacagcactcacc
atacgggacactaaaattgtaaccagcaattgtagtgaatggaaaacccgttatgagaca
caacttgaattaaatgatgaactagaaaagcaaattgtttatctcaaggagaaagtggaa
aaaatccatggaaactcttcaggtatggaagaaggtgggggtgagaaaggagctgaaaac
tgggagacagttgaagatgaacacatggaacagttggtcactgggacccctctgccatcc
cacgcagctgggatactctccttcagttag

>gi568815585r:36204368_36435830|GENSCAN_predicted_peptide_5|741_aa
MEQEPQNGEPAEIKIIREAYKKAFLFVNKGLNTDELGQKEEAKNYYKQGIGHLLRGISIS
SKESEHTGPGWESARQMQQKMKETLQNVRTRLEILEKGLATSLQNDLQEVPKLYPEFPPK
DMCEKLPEPQSFSSAPQHAEVNGNTSTPSAGAVAAPASLSLPSQSCPAEAPPAYTPQAAE
GHYTVSYGTDSGEFSSVGEEFYRNHSQPPPLETLGLDADELILIPNGVQIFFVNPAGEVS
APSYPGYLRIVRFLDNSLDTVLNRPPGFLQVCDWLYPLVPDRSPVLKCTAGAYMFPDTML
QAAGCFVGVVLSSELPEDDRELFEDLLRQMSDLRLQANWNRAEEENEFQIPGRTRPSSDQ
LKEASGTDVKQLDQGNKDVRHKGKRGKRGASEAIGQCQSSAAKPRRSGKESVREPWARVP
GALGVAARKAGLAAKSEGEGVEGYLPLPQKSREGVETRRGGVGVLAPSPEKRDLPLRKMK
GIEIKRRERLKCGTKIERRKRSRDSASWVSWGLVKGAEITGKAIQKGASKLRERIQPEEK
PVEVSPAVTKGLYIAKQATGGAAKVSQFLVDGVCTVANCVGKELAPHVKKHGSKLVPESL
KKDKDGKSPLDGAMVVAASSVQGFSTVWQGLECAAKCIVNNVSAETVQTVRYKYGYNAGE
ATHHAVDSAVNVGVTAYNINNIGIKAMVKKTATQTGHTLLEDYQIVDNSQRENQEGAANV
NVRGEKDEQTKEVKEAKKKDK

>gi568815585r:36204368_36435830|GENSCAN_predicted_CDS_5|2226_bp
atggagcaagagccacaaaatggagaacctgctgaaattaagatcatcagagaagcatat
aagaaggcctttttatttgttaacaaaggtctgaatacagatgaattaggtcagaaggaa
gaagcaaagaactactataagcaaggaataggacacctgctcagagggatcagcatttca
tcaaaagagtctgaacacacaggtcctgggtgggaatctgctagacagatgcaacagaaa
atgaaagaaactctacagaatgtacgcaccaggctggaaattctagagaagggtcttgcc
acttctctgcagaatgatcttcaggaggtgcccaagttatatccagaatttccacctaaa
gacatgtgtgaaaaattaccagagcctcagtcttttagttcagctcctcagcatgctgaa
gtaaatggaaacacctcaactccaagtgcaggggcagttgctgcacctgcttctctgtct
ttaccatcacaaagttgtccagcagaagctcctcctgcttatactcctcaagctgctgaa
ggtcactacactgtatcctatggaacagattctggggagttttcatcagttggagaggag
ttttataggaatcattctcagccaccgcctcttgagaccttagggctggatgcagatgaa
ttgattttgataccaaatggagtacagattttttttgtaaatcctgcaggggaggttagt
gcaccttcgtatcctgggtaccttcgaattgtgaggtttttggataattctctcgatacg
gttctaaaccgtcctcccgggtttcttcaggtttgtgactggttatatcctctagttcct
gatagatctccggttctgaaatgtactgcgggagcctacatgtttcctgatacaatgcta
caagcagcaggatgctttgtgggggtcgtcctgtcctctgagttaccagaggatgataga
gagctctttgaggatctgttaaggcaaatgtctgaccttcggctccaggccaactggaac
agagcagaagaagaaaatgaattccaaatccctggaagaactagaccctcctctgaccaa
ctaaaagaagcctctggcactgatgtgaaacagttggaccaaggcaataaggatgtacgt
cataaaggaaaacgtggaaaaaggggggcttccgaggcgatcgggcagtgtcagtcttca
gccgctaagccgagaagatctgggaaggagtcagtcagagagccttgggccagagttcca
ggggctctgggagtggctgccagaaaagcaggacttgctgctaagagtgaaggagaaggg
gttgaggggtacttgcccctcccccagaaaagcagagaaggggtagagacaaggagagga
ggggttggggtacttgccccttccccagaaaagcgggacttgccgctaaggaaaatgaaa
ggaattgaaattaagagaagggagagattgaagtgtggcaccaagattgaaaggagaaag
aggtcgagggatagtgcttcctgggtgagttggggtttagtcaaaggtgctgagattact
ggtaaggcaatccagaaaggtgcttctaaactccgagagcggattcaaccagaagaaaaa
cccgtggaagttagtccagctgtcaccaagggactttatatagcgaagcaagctacagga
ggagcagcaaaagtcagtcagttcctggttgatggagtttgcactgtagcaaattgcgtt
ggaaaagaactagctccacatgtcaagaagcatggaagcaaacttgttccagaatctctt
aaaaaagacaaagatgggaaatctcctctggatggtgctatggttgtagcagcaagtagt
gttcaaggattttcaactgtctggcaaggattggaatgtgcagctaaatgcatcgttaac
aatgtttcagcagaaactgtacaaactgtcagatacaaatacggatataatgcaggagaa
gctacccaccatgcggtggattctgcggtcaatgttggcgtaactgcctacaatattaac
aacattggtatcaaagcaatggtgaagaaaactgcaacacaaacaggacacactctcctt
gaggactatcagatagttgataattctcagagggaaaatcaagaaggagcagcaaatgtc
aacgtgagaggggagaaggatgagcagacgaaggaagtaaaggaggcaaagaagaaagat
aaatga

>gi568815585r:36204368_36435830|GENSCAN_predicted_peptide_6|262_aa
MSNEISSSRMMNVRATLITRKAKSLFLDFFSYKPPIDTYPLLYGAQMKDIGHLQHLAQRL
QWNRRAVNICGMHGWTKDLSPHSRMPSMLEKQCCSKGRLSSIDSIYLDIIPSSSRIFSDD
TELLARDWCSHSWTTEFQACCNDSLATAYVHWRLWGSTISRVLSDKSVQKKKKEEKEKEG
KGKKKRKKKKRKKKKRKKKKRNKKEEEKKKKEEEEEVEEEEGEGEGEEEEEEEEEEEEEE
EEEEEEEEEEEEELKKQSSSFC

>gi568815585r:36204368_36435830|GENSCAN_predicted_CDS_6|789_bp
atgtcaaatgaaatcagcagttctagaatgatgaatgttagagctaccctaattactagg
aaagccaagtctctcttcctggatttcttctcctataaaccgcctattgatacctaccca
cttctctatggagcacagatgaaggatattggtcatctccagcatctagcacaacgtctg
caatggaacaggcgagctgtgaatatttgtggaatgcatgggtggactaaagacctatca
cctcactctagaatgcccagcatgttggagaaacagtgttgttcaaaagggagactttct
agtatagatagcatctatttagatatcattcctagcagcagcaggattttctctgatgat
acagagctgttagctagagattggtgtagtcactcatggaccactgagtttcaggcctgc
tgtaatgactccctggctactgcctatgttcactggaggctctggggctctacaatcagc
agggtgcttagtgataaatcagttcagaagaagaagaaggaggagaaggagaaggagggg
aaggggaagaagaagaggaagaagaagaagaggaagaaaaagaagaggaagaagaagaag
aggaataagaaggaggaggagaagaagaagaaagaagaggaagaagaggtagaagaagaa
gaaggagaaggagaaggagaggaagaagaagaagaagaagaagaagaagaagaagaagaa
gaagaagaagaagaagaagaggaagaagaagaagaagaattaaagaaacaaagctctagc
ttttgctga

>gi568815585r:36204368_36435830|GENSCAN_predicted_peptide_7|135_aa
MEYYSAIKKNEILSFATGWMELEIIMRLRLLAGLAVESQTELATESFSDPGNNNTVGRCY
QNSRVSFIFKGTGNLGCKRTAVSQGIEVCDKRIEMSFMLNKIRFCVPPSSSLDSPDAYQL
LNIYLNCKAFNRRFC

>gi568815585r:36204368_36435830|GENSCAN_predicted_CDS_7|408_bp
atggaatactattcagctataaaaaagaatgagatcctgtcatttgcaacaggatggatg
gaactggagatcattatgcgactcaggctcttggcaggacttgctgtagagtcccagacg
gagttagccactgagtccttcagcgacccaggaaataacaacactgttggcagatgttac
cagaattcccgtgtttccttcatattcaaaggcacaggaaatctggggtgcaagcggact
gctgtctctcaaggaatagaagtctgtgacaaacgtatagaaatgagtttcatgttgaac
aagatccgtttctgcgttcctccctcatccagccttgattctccagatgcttaccaactt
cttaatatttacctcaactgcaaggctttcaaccggcgcttttgttag

>gi568815585r:36204368_36435830|GENSCAN_predicted_peptide_8|97_aa
MAMRPRRAHACRGRHGNAPARSGGAADWPIQQTRQQPVESEAMHCSNPKSGVVLATVARG
PDACQILTRAPLGQDPPQRTVLGLLTANGQYRRTCGQ

>gi568815585r:36204368_36435830|GENSCAN_predicted_CDS_8|291_bp
atggcgatgcggccccggagagcgcacgcctgccgcggtcggcatggaaacgctcccgct
aggtccgggggcgccgctgattggccgattcaacagacgcggcagcagcccgtggagtct
gaagcaatgcactgcagcaaccccaagagtggagttgtgctggctacagtggcccgaggt
cccgatgcttgtcagatactcaccagagccccgctgggccaggatcccccgcagaggaca
gtgctagggctgctaactgcaaatgggcagtacaggaggacctgtggccag