GENSCAN 1.0	Date run:  2-Nov-116	Time: 18:54:40

Sequence gi568815595f:152200194_152559324 : 359131 bp : 35.96% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -     10      5    6                               1.05
 1.03 Term -  17260  17088  173  2  2   40   55   134 0.470   2.31
 1.02 Intr -  18209  18087  123  0  0   41   55   133 0.446   4.94
 1.01 Init -  22977  22842  136  0  1   95   81    97 0.913  10.05
 1.00 Prom -  48909  48870   40                              -3.65

 2.02 PlyA -  49673  49668    6                               1.05
 2.01 Sngl -  50687  49893  795  2  0   42   35   302 0.512  15.92
 2.00 Prom -  58937  58898   40                              -6.15

 3.04 PlyA -  59298  59293    6                               1.05
 3.03 Term -  68545  68265  281  2  2   63   49   221 0.619  10.32
 3.02 Intr -  69064  68702  363  2  0  106   25   266 0.940  16.33
 3.01 Init -  93142  93055   88  1  1   46  107    62 0.949   4.75
 3.00 Prom -  97091  97052   40                              -4.35

 4.00 Prom +  98401  98440   40                              -6.35
 4.01 Init + 100001 100174  174  1  0   89   87    93 0.978   8.69
 4.02 Intr + 100688 100780   93  1  0   72   84    58 0.863   3.04
 4.03 Intr + 101338 101407   70  0  1   98   52    57 0.255   0.94
 4.04 Term + 117536 117642  107  0  2   78   49    50 0.037  -2.31
 4.05 PlyA + 118267 118272    6                               1.05

 5.04 PlyA - 118285 118280    6                               1.05
 5.03 Term - 134264 134215   50  0  2  103   47    50 0.369  -1.11
 5.02 Intr - 134865 134722  144  1  0   61   37   128 0.415   4.33
 5.01 Init - 138122 138068   55  2  1   96   72    49 0.902   5.61
 5.00 Prom - 139617 139578   40                              -7.45

 6.02 PlyA - 139630 139625    6                               1.05
 6.01 Sngl - 140711 140334  378  2  0   72   42   226 0.921  12.45
 6.00 Prom - 142193 142154   40                              -5.55

 7.04 PlyA - 143278 143273    6                               1.05
 7.03 Term - 148719 148618  102  0  0   58   36   129 0.483   2.00
 7.02 Intr - 169540 169396  145  0  1   26   41   119 0.023   0.36
 7.01 Init - 172229 172084  146  2  2   70   98    97 0.548   8.54
 7.00 Prom - 176591 176552   40                              -4.15

 8.00 Prom + 182485 182524   40                              -3.35
 8.01 Init + 203033 203047   15  1  0   87   48    36 0.040  -0.15
 8.02 Intr + 214748 214918  171  1  0  115   91   115 0.849  13.72
 8.03 Intr + 220527 220606   80  2  2   72  113    57 0.077   4.03
 8.04 Intr + 221336 221505  170  2  2   15   77   160 0.819   6.27
 8.05 Intr + 223075 223324  250  2  1   42   41   150 0.032   1.27
 8.06 Intr + 229248 229404  157  0  1   91   71    22 0.397  -0.11
 8.07 Intr + 232524 232727  204  2  0   93   75   204 0.895  18.07
 8.08 Intr + 245089 245346  258  0  0   80  101   280 0.974  25.24
 8.09 Intr + 247427 247580  154  1  1   50  110    87 0.699   5.82
 8.10 Term + 256074 256177  104  1  2   43   28   141 0.446   1.06
 8.11 PlyA + 256679 256684    6                               1.05

 9.00 Prom + 257755 257794   40                              -6.45
 9.01 Init + 257852 257922   71  1  2   68   76    73 0.152   4.67
 9.02 Intr + 284036 284164  129  2  0  103  110   -10 0.050   1.59
 9.03 Intr + 300800 300876   77  2  2   74  115    58 0.340   5.34
 9.04 Term + 300987 301381  395  1  2   42   48   266 0.303  12.21
 9.05 PlyA + 302151 302156    6                              -0.45

10.00 Prom + 302594 302633   40                              -8.95
10.01 Init + 305092 305178   87  0  0   65   51    74 0.432   2.10
10.02 Intr + 305780 305907  128  1  2   82   73   102 0.936   6.66
10.03 Intr + 321660 321867  208  0  1   54   69   114 0.003   4.26
10.04 Term + 327676 327810  135  0  0  106   42    35 0.004  -2.26
10.05 PlyA + 328363 328368    6                               1.05

11.02 PlyA - 328634 328629    6                               1.05
11.01 Sngl - 338144 337791  354  2  0   72   53   217 0.470  12.40

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  91943  91834  110  0  2   50   54    96 0.930   0.09
S.002 Init + 220461 220606  146  2  2   78  113   123 0.912  13.44


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:152200194_152559324|GENSCAN_predicted_peptide_1|143_aa
MDAAGCHQPKSINAGKGNKIPHVLTCKLETYKRGPTDTGAYLRVEGVKLQNFVVSVTAHK
GSVDPMSEQQQDLLQRVKEQSFHSVEAAGPDAKPLIARGGRASQLLRVWGPPSPHPPGTP
VGLQVQAQPQFPLAPLPPHLPGS

>gi568815595f:152200194_152559324|GENSCAN_predicted_CDS_1|432_bp
atggatgcagctggatgccatcaacctaagtcaattaatgcagggaaagggaacaaaata
ccgcacgttctcacttgtaagttggaaacttataagaggggaccaacagacaccggagct
tacttgagggtagaaggagtgaagctacagaacttcgtggtgagtgttacagctcataaa
ggcagtgtggacccaatgagtgagcagcagcaagatttattgcaaagagtgaaagaacaa
agcttccacagtgtggaagccgctggcccagatgctaagcccctcattgcccggggcggc
agggccagccagctgctccgagtgtggggcccgccaagcccacacccacctggaactcca
gttggcctgcaagtgcaggcgcagccccagttcccgctggcgcctctccctccacacctc
cctggaagctga

>gi568815595f:152200194_152559324|GENSCAN_predicted_peptide_2|264_aa
MIISTDAEKAFDKIQQPFMPKTLNKLGIDGTYLKIIRAIYDKPTANIILNGQKLEAFPLK
TGTRQGCPLSPLLFNIVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDLIVYLENPIVS
AQNLLKLISNFSKVSGYKINAQKSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGIQLT
RDVKDLFKENYKPLLNEIKEDTNKWKNIPCSWVGRINIVKMAILPKVIYRFNAIPIKLPM
TFFTELEKTTSKFIWIQKRARIAK

>gi568815595f:152200194_152559324|GENSCAN_predicted_CDS_2|795_bp
atgattatctcaacagatgcagaaaaggcctttgacaaaattcaacaacccttcatgcca
aaaactctcaataaattaggtattgatgggacgtatctcaaaataataagagctatctat
gacaaacccacagccaatatcatactgaatgggcaaaaactggaagcattccctttgaaa
actggcacaagacagggatgccctctctcaccactcctattcaacatagtgttggaagtt
ctggccagggcaattaggcaggagaaggaaataaagggtattcaattaggaaaagaggaa
gtcaaattgtccctgtttgcagacgacttgattgtatatctagaaaaccccattgtctca
gctcaaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaat
gcacaaaaatcacaagcattcttatacaccaacaacagacaaacagagagccaaatcatg
agtgaactcccattcacaattgcttcaaagagaataaaatacttaggaatccaacttaca
agggacgtgaaggacctcttcaaggagaactacaaaccactgcttaatgaaataaaagag
gatacaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatatcgtgaaa
atggccatactgcccaaggtaatttacagattcaatgccatccccatcaagctaccaatg
actttcttcacagaattggaaaaaactacttcaaagttcatatggatccaaaaaagagcc
cgcatcgccaagtaa

>gi568815595f:152200194_152559324|GENSCAN_predicted_peptide_3|243_aa
MLYIIWEELPSERVNAAFSTIQLHIAKSRGGAEGRETNYRERPAPARENRGRRAPPRTSS
FSHGQTRRSPNNEAARGNCENGNLPLTFFFQRRPHCRPSAQGIVGVMIPRCPRRKMELVS
SLSWEHCGRHNSFSCSEKTVACRCAASYRRGSPVNRTEPARAGHGRSPSGAESRRKPEPA
RAPWIPSASRWYLPSHAFSIVTSRRACRPDALPLLLPTARHTSGFILKEALAPGFARKPA
RLD

>gi568815595f:152200194_152559324|GENSCAN_predicted_CDS_3|732_bp
atgttatacattatatgggaagaactgccatctgaacgagttaatgcagccttcagcact
attcaactccacatagcaaaaagcagaggaggtgctgagggacgcgaaaccaactaccgc
gagcggcccgcccctgcccgggagaaccgcggccggcgagcacctcctcgcacttcctcc
ttcagccacgggcagacccgccggagtccgaacaatgaagcggcgcggggaaactgtgaa
aatggaaacttacctctcacatttttttttcagaggcggccccactgtcgaccaagtgcc
caaggcattgtgggagtcatgattccaagatgcccgcgacggaaaatggaacttgtcagc
tccttgtcatgggagcattgtgggcgccacaactcattcagctgcagtgaaaagactgtt
gcatgtcgctgtgcagcctcttatcgccgagggtcgcctgtcaaccggacagagcccgca
agagcgggtcatgggcggtcgcccagcggcgccgagagcaggaggaagccggagcccgcg
cgggcgccgtggatcccctcggcctcccgttggtatcttccatctcatgcgttcagcatt
gtaacctcgcggcgggcgtgcagaccggacgccctcccgcttcttctaccgactgctagg
cacaccagtgggttcattttgaaagaggcccttgcaccgggctttgcaaggaagccggca
aggttagattga

>gi568815595f:152200194_152559324|GENSCAN_predicted_peptide_4|147_aa
MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKAR
ATHFMENVTRSKVLNCCYSTLPEAQTLLHAVHFAKVFAKDFENMIFRVEQKGESVNPQTN
DSSSIKFCFQIDVQRDVQKDDKGYIVT

>gi568815595f:152200194_152559324|GENSCAN_predicted_CDS_4|444_bp
atggctgttagtgtcacaccaattcgggacacaaaatggctaacactggaagtatgtaga
gagttccagagggggacttgctcacggccagacacggaatgtaaatttgcacatccttcg
aaaagctgccaagttgaaaatggacgagtaatcgcctgctttgattcattgaaagccaga
gccacgcattttatggaaaatgtaactagaagtaaggtgctgaactgctgctacagcacc
ttacctgaggcacaaactttgttgcatgctgttcattttgctaaagtttttgccaaagat
ttcgagaatatgatctttagagttgaacagaaaggagaatctgtaaacccacaaacaaat
gattcttcatcgatcaagttctgttttcaaatagatgttcaacgagatgttcaaaaagac
gataaaggatacattgtaacctaa

>gi568815595f:152200194_152559324|GENSCAN_predicted_peptide_5|82_aa
MTTQHNTLGEEEQLAQSSAILAAAAAAEAGADHLDPSPCRMLAKAFLFTPTESLPVRLHL
FQSVKTVAFDLTSGYNVAGQQS

>gi568815595f:152200194_152559324|GENSCAN_predicted_CDS_5|249_bp
atgaccacgcagcacaacaccctgggagaagaggaacaattggcacagagctcagcaata
ttagcagcagcagcagcagcagaagctggagcagaccatttagacccatctccttgcagg
atgctagccaaagcattcttatttacacctacagagagtttgcccgtacgtctgcacctt
tttcagagtgtcaaaacagtggcgttcgacttaaccagtggctacaatgtggctggacaa
cagagttaa

>gi568815595f:152200194_152559324|GENSCAN_predicted_peptide_6|125_aa
MQMDPGPQVPLYWLGFVYAALAALGGISGYAKVGSVQSPSAGFFFSELAGLDASQPSRNP
KEHLSSPVYIWDLARYYANKILTLWNIYACGFSCRCLLIVSKLGSMYGEQILSVVAMSQL
GLMKN

>gi568815595f:152200194_152559324|GENSCAN_predicted_CDS_6|378_bp
atgcagatggaccctggcccacaggtgcctttatactggcttggctttgtctatgcagca
ctggctgctttaggtgggatcagtggttatgcaaaagtaggttctgtccagtccccttct
gctggattcttcttcagtgagttagcaggcctggatgcttctcagccatcacggaatcca
aaggaacatttgagttctcccgtttacatctgggatcttgctaggtattatgcgaataag
attctaacactctggaacatttacgcttgtgggtttagttgcaggtgcctgctgatagtt
tccaaacttggaagtatgtatggtgaacagatcctgtcagttgtagctatgtctcagctt
ggactcatgaagaattaa

>gi568815595f:152200194_152559324|GENSCAN_predicted_peptide_7|130_aa
MRKNQHKKAENSKNQNTSSPPRDHNSSPARKQNWMENEFDELTEVGFGRLNQKEVKSLNR
PITSSEIEAVIKSLSTKKSPGPDGFTAKFYQRYKEELHLKTFYDHIKSSAFFYTKDIQYT
LDIAAIAAAG

>gi568815595f:152200194_152559324|GENSCAN_predicted_CDS_7|393_bp
atgaggaaaaaccagcacaagaaggctgaaaattccaaaaaccagaacacctcttctcct
ccaagggatcataactcctcgccagcaaggaaacaaaactggatggaaaatgagtttgac
gaattgacagaagtaggcttcggaagactaaaccagaaagaagtcaaatccctgaataga
ccaataacaagttctgaaattgaagcagtaattaagagcctatcaaccaaaaaaagccca
ggaccagatggattcacagccaaattctaccagaggtacaaagaggagctgcacttaaaa
accttctatgatcatatcaagtccagtgcctttttctacaccaaagacattcaatacact
ttggatattgctgcaattgctgctgccggctaa

>gi568815595f:152200194_152559324|GENSCAN_predicted_peptide_8|520_aa
MADAPGRCSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQ
PVDHNSSPAREQNWTESEFDKLTEVGFRSVNKAADKFKLGAENSHSGNTENDTNILLEKS
NPKTYNRQIHQGLNEGKMLRAAREKEIQTTSREYYKHLYANKVENLKEIDKFLDTYSLPR
LNQEEVESLNRTITSAEIEAVIIIAYQPEKAQDQTDSQANSTRGTKRSWNRDTYKSLSQE
YSQYQIYQLHCYMLSFRENRMPLDNNIALISVFEILLNPLQPMFSVAPSLATNASAAAFN
PYLGPVSPSLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTDRLEVCREYQRGNCN
RGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPPAHLQAKIKAAQYQV
NQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIFQYQQALANMQLQQH
TAFLPPVPMVHGATPATVSAATTSATSVPFAATATANQVC

>gi568815595f:152200194_152559324|GENSCAN_predicted_CDS_8|1563_bp
atggctgacgctcctggccgttgctccagggagaactgcaaatatcttcatccaccccca
catttaaaaacgcagttggagataaatggacgcaataacttgattcagcagaagaacatg
gccatgttggcccagcaaatgcaactagccaatgccatgatgcctggtgccccattacaa
cccgtggatcacaactcctcgccagcaagggaacaaaactggacagaaagtgagtttgac
aaattgacagaagtaggcttcagaagtgtaaacaaagccgctgataagtttaaactgggt
gcagaaaattcacattcaggaaatacagagaacgacacaaatatactcctcgagaagagc
aaccccaagacatataatcgtcagattcaccaaggtttaaatgaaggaaaaatgttaagg
gcagccagagagaaagaaatacaaactaccagcagagaatactataaacacctctatgca
aataaagtagaaaacctaaaagaaatagataaattcctggacacgtacagcctcccaaga
ctcaaccaggaagaagtcgaatccctgaatagaacaataacaagtgctgaaattgaggca
gtaattataatagcctatcaaccagaaaaagcccaggaccagacggattcacaggcgaat
tctaccagaggtacaaagaggagctggaacagagatacttacaaatcattatcacaagaa
tatagtcagtatcaaatataccaattacattgttatatgttatccttcagagaaaacagg
atgccacttgataacaacattgcattaatatctgtctttgagattctgctgaaccccctg
cagccaatgttttcagttgcaccaagcttagccaccaatgcatcagcagccgcctttaat
ccctatctgggacctgtttctccaagcctggtcccggcagagatcttgccgactgcacca
atgttggttacagggaatccgggtgtccctgtacctgcagctgctgcagctgctgcacag
aaattaatgcgaacagacagacttgaggtatgtcgagagtaccaacgtggcaattgcaac
cgaggagaaaatgattgtcggtttgctcatcctgctgacagcacaatgattgacaccaat
gacaacacagtcactgtgtgtatggattacatcaaagggagatgctctcgggaaaagtgc
aaatactttcatccccctgcacatttgcaagccaagatcaaggctgcccaataccaggtc
aaccaggctgcagctgcacaggctgcagccaccgcagctgccatgggaattcctcaagct
gtacttcccccattaccaaagaggcctgctcttgaaaaaaccaacggtgccaccgcagtc
tttaacactggtattttccaataccaacaggctctagccaacatgcagttacaacagcat
acagcatttctcccaccagttcccatggtgcacggtgctacgccagccactgtgtccgca
gcaacaacatctgccacaagtgttcccttcgctgcaacagccacagccaaccaggtttgc
taa

>gi568815595f:152200194_152559324|GENSCAN_predicted_peptide_9|223_aa
MQPACMQKFIAGPSSASIGVEGPWGCDCRESWVGYYSFASIALYTSFSRFYIALWSTIYK
LADGTYRFKRFCVRTWWVLALTDFKNEATDPRGVKLQIIVVSVTALNAARLELFIPPGGF
MVLFIPPGGFLVSQASGVKLWTFPVSVIAHNDSADTKVSSSKIYCKEQRNKASTVWNGTR
GGCRCWLGQPAYIPLSDPTHILLIGPFYRELIGALYRELIGPF

>gi568815595f:152200194_152559324|GENSCAN_predicted_CDS_9|672_bp
atgcagcctgcatgcatgcagaagtttatagctggcccttcatctgcatcgattggtgtt
gaaggtccttggggttgtgactgtagagaaagctgggtagggtattatagctttgcttcc
atagccctatacacttcttttagcaggttttatattgcattgtggagtacaatctacaag
cttgcagatggcacttacaggtttaagcgattctgtgtccggacttggtgggttcttgct
ctcactgacttcaagaatgaagccacagaccctcgcggagtgaagctgcagatcatcgtg
gtgagtgttacagctcttaacgcagcacgtctggagttgttcattcctcccggtgggttc
atggtcttgttcattcctcccggtgggttcctggtctcgcaggcctcaggagtgaagctg
tggaccttcccagtgagcgttatagctcataatgacagtgcagacacaaaagtgagcagc
agcaagatttactgcaaagagcaaaggaacaaagcttccacagtgtggaatgggaccaga
gggggttgccgctgctggcttgggcagcctgcttatattcccttatccgaccccacccac
atcctgctgattggcccattttacagagagctgattggtgcattatacagagagctgatt
ggtccattttga

>gi568815595f:152200194_152559324|GENSCAN_predicted_peptide_10|185_aa
MLSESQVLELGNPRACLALYSLVAVLVPKRPKALWPSVVRFAGTQVQTTGLGDSPLTRAG
LNVAFVGEHQLSFLATGIKVWDNWVFRPGFHQIKIKVRVRPAVSSEMQGNCLPSSLVVGR
IHLLMVVGLRPSAPKGLPLPAEDNCTFLIDSIGNQTQAYLRDTVGLALDPCNKMSHMNIL
ASQCT

>gi568815595f:152200194_152559324|GENSCAN_predicted_CDS_10|558_bp
atgctgtccgagagtcaagtcctggaattggggaacccaagagcctgcttggcgctctac
tcccttgtggcagtgttggtacctaagagacccaaggcactgtggccctcggtggtgagg
tttgcaggcactcaagttcagaccactggactaggtgattcccctctgactagggctggt
ttaaatgttgcctttgtgggcgagcatcagctgagttttcttgctacaggaatcaaggta
tgggataactgggtctttcgcccagggtttcaccagattaaaatcaaggttcgtgttagg
cctgcagtttcatctgagatgcagggaaattgtcttccaagctcactggttgttggcaga
attcatttacttatggttgtaggactgaggccttcagctcctaaaggcctaccattacca
gccgaagacaattgtactttcttaattgattctataggcaaccaaacacaggcatatctc
agagatactgtgggtttggctctagacccctgcaacaaaatgagtcacatgaatattttg
gcttcccagtgtacttaa

>gi568815595f:152200194_152559324|GENSCAN_predicted_peptide_11|117_aa
MHQDLFLTHNSSRGTSKLNWQGATYSYHGPLKPLQEEIPRPPQILELSGRAAWRSGRSSK
QNDVEPRRFGVGASIEGMLKDGHLPRLNLLPKETLALGELSDCSGERSCPSDRGSPT

>gi568815595f:152200194_152559324|GENSCAN_predicted_CDS_11|354_bp
atgcatcaggacttgtttctgacccacaacagctccaggggaacaagtaagttgaactgg
caaggagcaacttactcttaccatgggcctctgaaacccctgcaggaggaaatccctcga
ccaccacagatactcgagttgtcaggaagagctgcttggagaagtggtaggagcagcaag
caaaatgatgtggagcccagaagatttggtgtgggagcatctatagagggcatgctcaag
gatggccatctccctaggctcaacttgctcccaaaggagactttagccctaggggaattg
tctgactgctctggagagcggtcttgcccatcagacaggggtagtccaacctga