Result of FASTA (ccds) for pF1KA0418
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KA0418, 940 aa
  1>>>pF1KA0418 940 - 940 aa - 940 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 10.7320+/-0.000936; mu= -3.0230+/- 0.057
 mean_var=263.0670+/-53.810, 0's: 0 Z-trim(113.9): 32  B-trim: 67 in 1/51
 Lambda= 0.079075
 statistics sampled from 14503 (14523) to 14503 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.737), E-opt: 0.2 (0.446), width:  16
 Scan time:  3.820

The best scores are:                                      opt bits E(32554)
CCDS31278.1 SH3PXD2A gene_id:9644|Hs108|chr10      (1105) 6262 728.1 2.2e-209
CCDS78084.1 SH3PXD2B gene_id:285590|Hs108|chr5     ( 430)  620 84.3 5.6e-16
CCDS34291.1 SH3PXD2B gene_id:285590|Hs108|chr5     ( 911)  522 73.3 2.5e-12


>>CCDS31278.1 SH3PXD2A gene_id:9644|Hs108|chr10           (1105 aa)
 initn: 6262 init1: 6262 opt: 6262  Z-score: 3872.6  bits: 728.1 E(32554): 2.2e-209
Smith-Waterman score: 6262; 100.0% identity (100.0% similar) in 940 aa overlap (1-940:166-1105)

                                             10        20        30
pF1KA0                               MILEQYVVVSNYKKQENSELSLQAGEVVDV
                                     ::::::::::::::::::::::::::::::
CCDS31 GSSKRKSVWLSSWAESPKKDVTGADATAEPMILEQYVVVSNYKKQENSELSLQAGEVVDV
         140       150       160       170       180       190     

               40        50        60        70        80        90
pF1KA0 IEKNESGWWFVSTSEEQGWVPATYLEAQNGTRDDSDINTSKTGEEEKYVTVQPYTSQSKD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 IEKNESGWWFVSTSEEQGWVPATYLEAQNGTRDDSDINTSKTGEEEKYVTVQPYTSQSKD
         200       210       220       230       240       250     

              100       110       120       130       140       150
pF1KA0 EIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYLKKAKDDLPTRKKNLAGPVEIIGN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 EIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYLKKAKDDLPTRKKNLAGPVEIIGN
         260       270       280       290       300       310     

              160       170       180       190       200       210
pF1KA0 IMEISNLLNKKASGDKETPPAEGEGHEAPIAKKEISLPILCNASNGSAVGVPDRTVSRLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 IMEISNLLNKKASGDKETPPAEGEGHEAPIAKKEISLPILCNASNGSAVGVPDRTVSRLA
         320       330       340       350       360       370     

              220       230       240       250       260       270
pF1KA0 QGSPAVARIAPQRAQISSPNLRTRPPPRRESSLGFQLPKPPEPPSVEVEYYTIAEFQSCI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 QGSPAVARIAPQRAQISSPNLRTRPPPRRESSLGFQLPKPPEPPSVEVEYYTIAEFQSCI
         380       390       400       410       420       430     

              280       290       300       310       320       330
pF1KA0 SDGISFRGGQKAEVIDKNSGGWWYVQIGEKEGWAPASYIDKRKKPNLSRRTSTLTRPKVP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 SDGISFRGGQKAEVIDKNSGGWWYVQIGEKEGWAPASYIDKRKKPNLSRRTSTLTRPKVP
         440       450       460       470       480       490     

              340       350       360       370       380       390
pF1KA0 PPAPPSKPKEAEEGPTGASESQDSPRKLKYEEPEYDIPAFGFDSEPELSEEPVEDRASGE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 PPAPPSKPKEAEEGPTGASESQDSPRKLKYEEPEYDIPAFGFDSEPELSEEPVEDRASGE
         500       510       520       530       540       550     

              400       410       420       430       440       450
pF1KA0 RRPAQPHRPSPASSLQRARFKVGESSEDVALEEETIYENEGFRPYAEDTLSARGSSGDSD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 RRPAQPHRPSPASSLQRARFKVGESSEDVALEEETIYENEGFRPYAEDTLSARGSSGDSD
         560       570       580       590       600       610     

              460       470       480       490       500       510
pF1KA0 SPGSSSLSLTRKNSPKSGSPKSSSLLKLKAEKNAQAEMGKNHSSASFSSSITINTTCCSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 SPGSSSLSLTRKNSPKSGSPKSSSLLKLKAEKNAQAEMGKNHSSASFSSSITINTTCCSS
         620       630       640       650       660       670     

              520       530       540       550       560       570
pF1KA0 SSSSSSSLSKTSGDLKPRSASDAGIRGTPKVRAKKDADANAGLTSCPRAKPSVRPKPFLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 SSSSSSSLSKTSGDLKPRSASDAGIRGTPKVRAKKDADANAGLTSCPRAKPSVRPKPFLN
         680       690       700       710       720       730     

              580       590       600       610       620       630
pF1KA0 RAESQSQEKMDISTLRRQLRPTGQLRGGLKGSKSEDSELPPQTASEAPSEGSRRSSSDLI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 RAESQSQEKMDISTLRRQLRPTGQLRGGLKGSKSEDSELPPQTASEAPSEGSRRSSSDLI
         740       750       760       770       780       790     

              640       650       660       670       680       690
pF1KA0 TLPATTPPCPTKKEWEGPATSYMTCSAYQKVQDSEISFPAGVEVQVLEKQESGWWYVRFG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 TLPATTPPCPTKKEWEGPATSYMTCSAYQKVQDSEISFPAGVEVQVLEKQESGWWYVRFG
         800       810       820       830       840       850     

              700       710       720       730       740       750
pF1KA0 ELEGWAPSHYLVLDENEQPDPSGKELDTVPAKGRQNEGKSDSLEKIERRVQALNTVNQSK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 ELEGWAPSHYLVLDENEQPDPSGKELDTVPAKGRQNEGKSDSLEKIERRVQALNTVNQSK
         860       870       880       890       900       910     

              760       770       780       790       800       810
pF1KA0 KATPPIPSKPPGGFGKTSGTPAVKMRNGVRQVAVRPQSVFVSPPPKDNNLSCALRRNESL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 KATPPIPSKPPGGFGKTSGTPAVKMRNGVRQVAVRPQSVFVSPPPKDNNLSCALRRNESL
         920       930       940       950       960       970     

              820       830       840       850       860       870
pF1KA0 TATDGLRGVRRNSSFSTARSAAAEAKGRLAERAASQGSDSPLLPAQRNSIPVSPVRPKPI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 TATDGLRGVRRNSSFSTARSAAAEAKGRLAERAASQGSDSPLLPAQRNSIPVSPVRPKPI
         980       990      1000      1010      1020      1030     

              880       890       900       910       920       930
pF1KA0 EKSQFIHNNLKDVYVSIADYEGDEETAGFQEGVSMEVLERNPNGWWYCQILDGVKPFKGW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 EKSQFIHNNLKDVYVSIADYEGDEETAGFQEGVSMEVLERNPNGWWYCQILDGVKPFKGW
        1040      1050      1060      1070      1080      1090     

              940
pF1KA0 VPSNYLEKKN
       ::::::::::
CCDS31 VPSNYLEKKN
        1100     

>>CCDS78084.1 SH3PXD2B gene_id:285590|Hs108|chr5          (430 aa)
 initn: 877 init1: 345 opt: 620  Z-score: 400.3  bits: 84.3 E(32554): 5.6e-16
Smith-Waterman score: 817; 48.8% identity (68.4% similar) in 285 aa overlap (1-283:152-396)

                                             10        20        30
pF1KA0                               MILEQYVVVSNYKKQENSELSLQAGEVVDV
                                     :.:::::::.::.:::.::.::..:.:::.
CCDS78 FETRPEDLNPPKEEHIGKKKSGGDQTSVDPMVLEQYVVVANYQKQESSEISLSVGQVVDI
             130       140       150       160       170       180 

               40        50        60        70        80        90
pF1KA0 IEKNESGWWFVSTSEEQGWVPATYLEAQNGTRDDSDINTSKTGEEEKYVTVQPYTSQSKD
       :::::::::::::.::::::::: ::.:.:..:. ...     :::::... :::....:
CCDS78 IEKNESGWWFVSTAEEQGWVPATCLEGQDGVQDEFSLQPE---EEEKYTVIYPYTARDQD
             190       200       210       220          230        

              100       110       120       130       140       150
pF1KA0 EIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYLKKAKDDLPTRKKNLAGPVEIIGN
       :...:.:..::::.::::::: ::: :::::::::::::          : . :.     
CCDS78 EMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYLKK----------NSGEPL-----
      240       250       260       270                 280        

              160       170       180       190       200       210
pF1KA0 IMEISNLLNKKASGDKETPPAEGEGHEAPIAKKEISLPILCNASNGSAVGVPDRTVSRLA
                         ::  : :  .:     ..:  .   .:  :::   . .:   
CCDS78 ------------------PPKPGPG--SPSHPGALDLDGVSRQQN--AVGREKELLSSQR
                             290         300         310       320 

              220       230       240         250       260        
pF1KA0 QGSPAVARIAPQRAQISSPNLRTRPPPRRESSL--GFQLPKPPEPPSVEVEYYTIAEFQS
       .:      .    :.  ::..: ::::::. ..  :..::::: ::.:: :::::::::.
CCDS78 DGRFEGRPVPDGDAKQRSPKMRQRPPPRRDMTIPRGLNLPKPPIPPQVEEEYYTIAEFQT
             330       340       350       360       370       380 

      270       280       290       300       310       320        
pF1KA0 CISDGISFRGGQKAEVIDKNSGGWWYVQIGEKEGWAPASYIDKRKKPNLSRRTSTLTRPK
        : :::::..: :.:                                             
CCDS78 TIPDGISFQAGLKVEDHKNVHLESPVEVPLRRIKMRTALGKHVAASMEM           
             390       400       410       420       430           

>>CCDS34291.1 SH3PXD2B gene_id:285590|Hs108|chr5          (911 aa)
 initn: 1222 init1: 370 opt: 522  Z-score: 334.9  bits: 73.3 E(32554): 2.5e-12
Smith-Waterman score: 1244; 32.1% identity (54.2% similar) in 951 aa overlap (1-939:152-910)

                                             10        20        30
pF1KA0                               MILEQYVVVSNYKKQENSELSLQAGEVVDV
                                     :.:::::::.::.:::.::.::..:.:::.
CCDS34 FETRPEDLNPPKEEHIGKKKSGGDQTSVDPMVLEQYVVVANYQKQESSEISLSVGQVVDI
             130       140       150       160       170       180 

               40        50        60        70        80        90
pF1KA0 IEKNESGWWFVSTSEEQGWVPATYLEAQNGTRDDSDINTSKTGEEEKYVTVQPYTSQSKD
       :::::::::::::.::::::::: ::.:.:..:. ..   .  :::::... :::....:
CCDS34 IEKNESGWWFVSTAEEQGWVPATCLEGQDGVQDEFSL---QPEEEEKYTVIYPYTARDQD
             190       200       210          220       230        

              100       110       120       130       140       150
pF1KA0 EIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYLKKAKDDLPTRKKNLAGPVEIIGN
       :...:.:..::::.::::::: ::: :::::::::::::          : . :.     
CCDS34 EMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYLKK----------NSGEPL-----
      240       250       260       270                 280        

              160       170       180       190       200       210
pF1KA0 IMEISNLLNKKASGDKETPPAEGEGHEAPIAKKEISLPILCNASNGSAVGVPDRTVSRLA
                         ::  : :  .:     ..:  .   .:  :::   . .:   
CCDS34 ------------------PPKPGPG--SPSHPGALDLDGVSRQQN--AVGREKELLSSQR
                             290         300         310       320 

              220       230       240         250       260        
pF1KA0 QGSPAVARIAPQRAQISSPNLRTRPPPRRESSL--GFQLPKPPEPPSVEVEYYTIAEFQS
       .:      .    :.  ::..: ::::::. ..  :..::::: ::.:: :::::::::.
CCDS34 DGRFEGRPVPDGDAKQRSPKMRQRPPPRRDMTIPRGLNLPKPPIPPQVEEEYYTIAEFQT
             330       340       350       360       370       380 

      270       280       290       300       310       320        
pF1KA0 CISDGISFRGGQKAEVIDKNSGGWWYVQIGEKEGWAPASYIDKRKKPNLSRRTSTLTRPK
        : :::::..: :.:::.:: .::::.:: .:::::::..::: ::      ::. .::.
CCDS34 TIPDGISFQAGLKVEVIEKNLSGWWYIQIEDKEGWAPATFIDKYKK------TSNASRPN
             390       400       410       420             430     

      330       340       350       360       370       380        
pF1KA0 VPPPAPPSKPKEAEEGPTGASESQDSPRKLKYEEPEYDIPAFGFDSEPELSEE-----PV
          : :  .  . . : ..: :.. . .     .:  : :   .::    :..      :
CCDS34 FLAPLP-HEVTQLRLGEAAALENNTGSEATGPSRPLPDAPHGVMDSGLPWSKDWKGSKDV
         440        450       460       470       480       490    

           390       400       410       420       430       440   
pF1KA0 EDRASGERRPAQPHRPSPASSLQRARFKVGESSEDVALEEETIYENEGFRPYAEDTLSAR
         .::..   .  ..     .... . ..   .:..   :  . : :  :  .:.    :
CCDS34 LRKASSDMSASAGYEEISDPDMEE-KPSLPPRKESIIKSEGELLERERERQRTEQL---R
          500       510        520       530       540          550

           450       460       470       480       490       500   
pF1KA0 GSSGDSDSPGSSSLSLTRKNSPKSGSPKSSSLLKLKAEKNAQAEMGKNHSSASFSSSITI
       : .     ::     .  :. : .   ..:   . : .:.   .. ::  .   . ..  
CCDS34 GPT--PKPPGVILPMMPAKHIPPA---RDSRRPEPKPDKSRLFQL-KNDMGLECGHKVLA
                560       570          580       590        600    

           510       520       530       540       550       560   
pF1KA0 NTTCCSSSSSSSSSLSKTSGDLKPRSASDAGIRGTPKVRAKKDADANAGLTSCPRAKPSV
       . .    .. .   .::.. :: :.   ::    ::.         :  : : :...:  
CCDS34 KEV----KKPNLRPISKSKTDL-PEEKPDA----TPQ---------NPFLKSRPQVRP--
              610       620            630                640      

           570       580       590       600       610       620   
pF1KA0 RPKPFLNRAESQSQEKMDISTLRRQLRPTGQLRGGLKGSKSEDSELPPQTASEAPSEGSR
       .: :  .    :.....:: .:: .:::          .::.:. :         .:: .
CCDS34 KPAPSPKTEPPQGEDQVDICNLRSKLRP----------AKSQDKSL-------LDGEGPQ
          650       660       670                 680              

           630       640       650       660       670       680   
pF1KA0 RSSSDLITLPATTPPCPTKKEWEGPATSYMTCSAYQKVQDSEISFPAGVEVQVLEKQESG
         ... ...  .  :       :::.          ..::                    
CCDS34 AVGGQDVAFSRSFLPG------EGPG----------RAQD--------------------
       690       700                       710                     

           690       700       710       720       730       740   
pF1KA0 WWYVRFGELEGWAPSHYLVLDENEQPDPSGKELDTVPAKGRQNEGKSDSLEKIERRVQAL
           : :. .: .:..   ..    : :. :  : :        .::  .         :
CCDS34 ----RTGKQDGLSPKE---ISCRAPPRPA-KTTDPV--------SKSVPVP--------L
                 720          730                740               

           750       760        770          780       790         
pF1KA0 NTVNQSKKATPPIPSKPPGGFGKTS-GTPAVK---MRNGVRQVAVRPQSVFVSPPPKDNN
       . . :.. ..::    ::   ...:   : :.    ..   ..:  :  ... ::     
CCDS34 QEAPQQRPVVPPRRPPPPKKTSSSSRPLPEVRGPQCEGHESRAAPTPGRALLVPPKAKPF
       750       760       770       780       790       800       

     800       810       820       830       840       850         
pF1KA0 LSCALRRNESLTATDGLRGVRRNSSFSTARSAAAEAKGRLAERAASQGSDSPLLPAQRNS
       ::      .:: . :  ::    . ..:..       :.  :.::.             :
CCDS34 LS------NSLGGQDDTRGKGSLGPWGTGK------IGENREKAAAA------------S
             810       820       830             840               

     860       870       880        890       900       910        
pF1KA0 IPVSPVRPKPIEKSQFIHNNLKD-VYVSIADYEGDEETAGFQEGVSMEVLERNPNGWWYC
       .: .              ..::: .::..::.:::..:..::::. .:: :.: .:::.:
CCDS34 VPNA--------------DGLKDSLYVAVADFEGDKDTSSFQEGTVFEVREKNSSGWWFC
                         850       860       870       880         

      920       930       940
pF1KA0 QILDGVKPFKGWVPSNYLEKKN
       :.:.:.  ..::.:::::.:: 
CCDS34 QVLSGAPSWEGWIPSNYLRKKP
     890       900       910 




940 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Wed Nov  2 18:52:47 2016 done: Wed Nov  2 18:52:47 2016
 Total Scan time:  3.820 Total Display time:  0.050

Function used was FASTA [36.3.4 Apr, 2011]
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