GENSCAN 1.0	Date run:  2-Nov-116	Time: 18:49:23

Sequence gi568815584f:85521515_85723494 : 201980 bp : 38.30% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   7490   7586   97  2  1   88   93    88 0.979   8.39
 1.02 Intr +   8628   9020  393  2  0   14   98   424 0.838  29.92
 1.03 Intr +   9549   9708  160  2  1   81   72    33 0.362  -0.36
 1.04 Intr +  10067  10269  203  0  2   18  101   105 0.466   2.88
 1.05 Intr +  10292  10405  114  1  0   29   31   166 0.820   4.72
 1.06 Intr +  11917  12216  300  0  0   44   16   286 0.732  13.01
 1.07 Intr +  12344  12479  136  1  1   26   97   127 0.994   6.62
 1.08 Intr +  12542  12684  143  0  2   94   72    89 0.929   7.05
 1.09 Intr +  22612  22765  154  0  1   62   48   103 0.242   2.42
 1.10 Intr +  24354  24499  146  1  2    8  103    81 0.323   0.68
 1.11 Intr +  30180  30266   87  2  0   52  100    41 0.197   0.95
 1.12 Intr +  31120  31222  103  0  1   78  110    45 0.269   4.53
 1.13 Term +  35447  35625  179  0  2    8   50   116 0.087  -3.33
 1.14 PlyA +  35669  35674    6                               1.05

 2.05 PlyA -  36676  36671    6                               1.05
 2.04 Term -  45844  45697  148  0  1   39   55   147 0.182   2.89
 2.03 Intr -  72026  71923  104  2  2   84   86    62 0.185   3.65
 2.02 Intr -  87975  87798  178  2  1   88   86   128 0.896  11.60
 2.01 Init -  89211  89159   53  0  2   69   97    -3 0.243  -0.61
 2.00 Prom -  94389  94350   40                              -5.75

 3.00 Prom +  99161  99200   40                              -6.15
 3.01 Sngl + 100001 101983 1983  1  0   70   48  1331 0.987 121.05
 3.02 PlyA + 102341 102346    6                               1.05

 4.07 PlyA - 103401 103396    6                               1.05
 4.06 Term - 168722 168657   66  2  0   79   44    85 0.263   0.16
 4.05 Intr - 172505 172464   42  2  0   74  103    45 0.217   2.12
 4.04 Intr - 183495 183413   83  1  2   32   52   103 0.012  -0.46
 4.03 Intr - 194276 194063  214  2  1   60   47   113 0.034   1.77
 4.02 Intr - 200212 200126   87  1  0   83   63    45 0.110   0.75
 4.01 Intr - 201375 201342   34  2  1  112   99    32 0.678   4.01

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  87315  87208  108  0  0   69   43    91 0.918   0.23
S.002 Term + 105427 105561  135  0  0   66   49   182 0.958   9.14


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584f:85521515_85723494|GENSCAN_predicted_peptide_1|738_aa
XPEWRQKKDSVEDVPVWISVCALSDVLAHLGVTLVVRSKPVAVTCAFGIIHCHRGGTSAR
DIISARKSPRQGAELLLSEVRLWSSVPGAQQRRGGISAPAAVSTEPWDQGGSSQRWAGGT
SAATPKTIPCPGIPAAAAPASSLSTSLTLSDSDEPIARRRRSRQLVGAGGAFSKTKSLPA
LLVLFGLAGTELGPSRLSRAPAEVAKAWRAYEAESGSKRVVLLPAAVTGGAEATATVVVG
ALLLEPPSKMALTVCSLPISTPSRAPSSPGYVLVTYCGEKMGYVNPPLHNATGTATRAHE
PGSVRVCVLACVSACASVRLRAGRRTPGSELSAHTRRRRARLALPPSPGILQIRGAPAPR
GSFLPPSPLAVLLLGFVGLAKRRGGGGGGEKAGVAAAEAKRKWHARTLEAVVAEDGGRRC
RSSGLAPAAAAVAAAATRRTQQKFGSGGGRGAERDYHQGWKETSRTFAEPFLALAGLAES
KREAKFKIPGMSTERWQITSHVRGAAVLRGKFPQEWIDYPVEGEVQPPPFCLTLSRFVRQ
ILAGKPNLDQQQAFQTTHEAIHMPHWIGDNGQRNDQREDNSIKCVASERAWEKWRIDCVI
NRSASLVFKIYVIAQAILMDPTEITDDLIHFLPVRKGSHVVRNLKASSKRKMAPLGAQQL
FQDDNVDNSVASLGFLVQTAARENEEDPEAETPDKTIRAHETYSLPQEQYGGNCPHDSNY
LPLGPSHNTWELWEYDSR

>gi568815584f:85521515_85723494|GENSCAN_predicted_CDS_1|2217_bp
nntccggaatggagacagaagaaagattcggttgaagatgtccctgtgtggatctcagtt
tgcgctctgagcgacgtcctggctcatttgggtgtgacgttagttgtacgttcgaaacct
gtcgccgtcacttgcgcgtttggcattatccattgtcaccgcggaggaacgagcgctcga
gatatcatcagtgcccgcaaatctccgcgccaaggcgctgagctactcctttccgaggtg
cgcctctggtcctccgtccctggtgcccagcagcggcgaggcggcatctccgctcccgcc
gccgtgtccaccgagccctgggatcagggtggcagttctcaacgatgggcaggagggacc
tcggcggcgacccctaaaacaataccatgccccgggatccccgctgctgccgcgccagcg
tcttccctttccacctccctgaccctgtcggattcggatgagcccattgcaaggagaaga
cgcagccgtcagttggtgggggcgggtggggctttttccaaaaccaagtcccttccagcc
ctgcttgtcctcttcgggctggcgggcactgagctggggccatcacgcctttctagagcg
cctgcggaggtggcgaaggcttggagagcatacgaggcggaatccggatcgaagcgtgtg
gtgctcctgccagcggcagttactggtggagctgaggccaccgctactgtcgtcgttggc
gctttgcttctggaacctcccagcaagatggcactcactgtctgttcccttccgattagc
acccccagccgcgctccctcctccccgggatacgtattagtcacatactgtggggagaag
atgggctatgtaaatccacctttgcataatgcaacaggaacagcgacccgcgcgcacgaa
ccgggtagtgtgcgcgtgtgtgtgctcgcgtgtgtgagcgcgtgtgccagcgtgcgtctc
cgcgcgggccgccgcacgcccggctccgagctgtccgcacacacgcgtcggaggagagcc
cgcctagctctcccgccgagtcccgggatcctccaaatccgaggagctccggcgccgcgg
ggcagctttctgccgccttccccgctcgctgtacttcttttggggttcgttggcttggcg
aagcggagagggggaggcggaggaggagagaaggcgggggtcgcggcggccgaagccaag
agaaagtggcatgcccgaaccctggaggcggtggtggcggaggacgggggaagacgatgc
cgcagctccggcttggctccagcagccgccgccgtcgccgccgccgccacccggaggacc
cagcaaaagtttggatctgggggagggcgcggcgctgagcgggattaccaccagggctgg
aaggagacctcgagaacctttgcagagcccttcctggccctcgcgggtctggcagaaagt
aagagggaggcgaagttcaagatcccggggatgagcaccgagcgctggcagatcactagt
cacgttagaggggcagctgtgctgagaggcaaattcccccaggagtggattgattaccca
gtggagggggaagtacaaccaccacctttctgccttactctgagcaggtttgtcagacaa
atattggctggtaaacccaaccttgatcagcagcaagctttccaaaccacacatgaggca
attcatatgccacactggataggtgataatggacaacggaatgaccagagggaagataat
agcataaagtgtgtggcctctgagagggcctgggaaaaatggagaattgactgtgttatt
aataggtcagcttcactggttttcaaaatctatgtaattgctcaggcgattttaatggac
ccgactgagattactgatgacttaattcacttcttgccagtgagaaaaggtagccatgtg
gtgagaaacttgaaggcctcttcaaagagaaaaatggcccctctgggagctcagcaattg
tttcaggatgataatgttgataattccgtcgcatcattgggttttctggtgcagacagcg
gcaagagaaaatgaggaagacccagaagcagaaacccctgataaaaccatcagagctcat
gaaacttattcactaccacaagaacagtatgggggaaactgcccccatgattcaaattat
cttccactgggtccctcccacaacacatgggaattatgggaatatgattcaagatga

>gi568815584f:85521515_85723494|GENSCAN_predicted_peptide_2|160_aa
MGDSGCRMMVLRRREANKWLRSDSSVFSKCSISPTLLTILQGIQNMGIISKPVRVPEKAE
IDHSTNLRPTTNTPPIRKVHDIENPTGTHRFGLNTFSINRVSIICKEEPCERKPQVGLIK
EDAEGSFEIPGIFGASITSRHPPGMGKPQRSGNCPVSMGF

>gi568815584f:85521515_85723494|GENSCAN_predicted_CDS_2|483_bp
atgggggattcagggtgcagaatgatggtgctcaggagaagagaggccaataagtggcta
cgctctgactctagtgttttctccaaatgttctatctccccaactctcttgaccattctg
cagggaattcagaatatgggaataatctcaaaaccagtgagagttcctgaaaaagctgaa
attgaccacagtaccaaccttagacctacaaccaacacccctcctatcaggaaagtacat
gacattgaaaaccctactggcactcacagatttgggctcaacacattttcaatcaacaga
gtttcaatcatatgtaaggaagagccctgtgaaagaaagcctcaagttggtctaataaag
gaagatgccgaaggaagcttcgagattccaggtatctttggagcttctattacaagcaga
cacccaccagggatggggaaaccacagcgttcaggaaactgtccagtgtccatgggattc
tga

>gi568815584f:85521515_85723494|GENSCAN_predicted_peptide_3|660_aa
MGLQTTKWPSHGAFFLKSWLIISLGLYSQVSKLLACPSVCRCDRNFVYCNERSLTSVPLG
IPEGVTVLYLHNNQINNAGFPAELHNVQSVHTVYLYGNQLDEFPMNLPKNVRVLHLQENN
IQTISRAALAQLLKLEELHLDDNSISTVGVEDGAFREAISLKLLFLSKNHLSSVPVGLPV
DLQELRVDENRIAVISDMAFQNLTSLERLIVDGNLLTNKGIAEGTFSHLTKLKEFSIVRN
SLSHPPPDLPGTHLIRLYLQDNQINHIPLTAFSNLRKLERLDISNNQLRMLTQGVFDNLS
NLKQLTARNNPWFCDCSIKWVTEWLKYIPSSLNVRGFMCQGPEQVRGMAVRELNMNLLSC
PTTTPGLPLFTPAPSTASPTTQPPTLSIPNPSRSYTPPTPTTSKLPTIPDWDGRERVTPP
ISERIQLSIHFVNDTSIQVSWLSLFTVMAYKLTWVKMGHSLVGGIVQERIVSGEKQHLSL
VNLEPRSTYRICLVPLDAFNYRAVEDTICSEATTHASYLNNGSNTASSHEQTTSHSMGSP
FLLAGLIGGAVIFVLVVLLSVFCWHMHKKGRYTSQKWKYNRGRRKDDYCEAGTKKDNSIL
EMTETSFQIVSLNNDQLLKGDFRLQPIYTPNGGINYTDCHIPNNMRYCNSSVPDLEHCHT

>gi568815584f:85521515_85723494|GENSCAN_predicted_CDS_3|1983_bp
atgggcctacagaccacaaagtggcccagccatggggcttttttcctgaagtcttggctt
atcatttccctggggctctactcacaggtgtccaaactcctggcctgccctagtgtgtgc
cgctgcgacaggaactttgtctactgtaatgagcgaagcttgacctcagtgcctcttggg
atcccggagggcgtaactgtactctacctccacaacaaccaaattaataatgctggattt
cctgcagaactgcacaatgtacagtcggtgcacacggtctacctgtatggcaaccaactg
gacgaattccccatgaaccttcccaagaatgtcagagttctccatttgcaggaaaacaat
attcagaccatttcacgggctgctcttgcccagctcttgaagcttgaagagctgcacctg
gatgacaactccatatccacagtgggggtggaagacggggccttccgggaggctattagc
ctcaaattgttgtttttgtctaagaatcacctgagcagtgtgcctgttgggcttcctgtg
gacttgcaagagctgagagtggatgaaaatcgaattgctgtcatatccgacatggccttc
cagaatctcacgagcttggagcgtcttattgtggacgggaacctcctgaccaacaagggt
atcgccgagggcaccttcagccatctcaccaagctcaaggaattttcaattgtacgtaat
tcgctgtcccaccctcctcccgatctcccaggtacgcatctgatcaggctctatttgcag
gacaaccagataaaccacattcctttgacagccttctcaaatctgcgtaagctggaacgg
ctggatatatccaacaaccaactgcggatgctgactcaaggggtttttgataatctctcc
aacctgaagcagctcactgctcggaataacccttggttttgtgactgcagtattaaatgg
gtcacagaatggctcaaatatatcccttcatctctcaacgtgcggggtttcatgtgccaa
ggtcctgaacaagtccgggggatggccgtcagggaattaaatatgaatcttttgtcctgt
cccaccacgacccccggcctgcctctcttcaccccagccccaagtacagcttctccgacc
actcagcctcccaccctctctattccaaaccctagcagaagctacacgcctccaactcct
accacatcgaaacttcccacgattcctgactgggatggcagagaaagagtgaccccacct
atttctgaacggatccagctctctatccattttgtgaatgatacttccattcaagtcagc
tggctctctctcttcaccgtgatggcatacaaactcacatgggtgaaaatgggccacagt
ttagtagggggcatcgttcaggagcgcatagtcagcggtgagaagcaacacctgagcctg
gttaacttagagccccgatccacctatcggatttgtttagtgccactggatgcttttaac
taccgcgcggtagaagacaccatttgttcagaggccaccacccatgcctcctatctgaac
aacggcagcaacacagcgtccagccatgagcagacgacgtcccacagcatgggctccccc
tttctgctggcgggcttgatcgggggcgcggtgatatttgtgctggtggtcttgctcagc
gtcttttgctggcatatgcacaaaaaggggcgctacacctcccagaagtggaaatacaac
cggggccggcggaaagatgattattgcgaggcaggcaccaagaaggacaactccatcctg
gagatgacagaaaccagttttcagatcgtctccttaaataacgatcaactccttaaagga
gatttcagactgcagcccatttacaccccaaatgggggcattaattacacagactgccat
atccccaacaacatgcgatactgcaacagcagcgtgccagacctggagcactgccatacg
tga

>gi568815584f:85521515_85723494|GENSCAN_predicted_peptide_4|175_aa
XFDKTTNQYSFLVTIYKEVSYKESAHMIMETEKSQDLQGDSTPSSPVLGLGLALLAPQLA
NGLLWSLVIVTVPSFSERSLRAVMKTLGKVTHSHHGGRDAGLHCSSDSDGQSIFYIVWNH
VPKITGLMEEMGLDADLSKQPKLTQLVEGEGPSQKVPMFLNMIHRRVKELRVAAE

>gi568815584f:85521515_85723494|GENSCAN_predicted_CDS_4|528_bp
nnttttgataaaactaccaaccagtactccttcctggtgacaatatataaagaggtttct
tataaggaatcagctcacatgattatggagacagaaaagtcccaagatctgcagggtgat
tcaactccaagttccccagttttgggactcggactggctctccttgctcctcagcttgca
aatggcctattgtggagccttgtgatcgtgacagtacctagttttagtgagaggagtctc
agagctgtcatgaaaacattggggaaagtgactcacagtcatcatggtggacgggatgca
ggactacattgtagctctgactcagacggacagagcatattttacattgtgtggaatcat
gtaccaaaaataacaggacttatggaggaaatggggctggatgcagacctttcaaaacaa
cctaaacttacacaactggtggaaggagaaggtccttctcagaaagttcctatgttctta
aatatgattcatcgaagggtgaaagaactaagagtagcagcagaatag