GENSCAN 1.0	Date run:  2-Nov-116	Time: 18:05:39

Sequence gi568815590f:108343659_108586595 : 242937 bp : 36.44% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +    315    425  111  2  0   78   32   110 0.511   4.66
 1.02 Term +   8688   8969  282  2  0   38   47   210 0.196   6.34
 1.03 PlyA +   9453   9458    6                               1.05

 2.00 Prom +  11971  12010   40                              -5.45
 2.01 Init +  15305  15365   61  1  1  100   92    67 0.527   7.83
 2.02 Term +  30045  30121   77  1  2   72   40    78 0.015  -1.58
 2.03 PlyA +  30305  30310    6                               1.05

 3.03 PlyA -  31939  31934    6                               1.05
 3.02 Term -  32963  32492  472  1  1   33   42   224 0.028   5.72
 3.01 Init -  35887  35691  197  1  2  102   37   140 0.030   8.75
 3.00 Prom -  43213  43174   40                              -4.65

 4.00 Prom +  43344  43383   40                              -3.65
 4.01 Init +  43521  43669  149  2  2   83   59    78 0.591   4.01
 4.02 Intr +  51978  52078  101  0  2  107  -13    60 0.017  -3.37
 4.03 Intr +  64507  64620  114  2  0  122  106    20 0.188   6.70
 4.04 Term +  64779  64798   20  1  2  107   36    35 0.180  -2.30
 4.05 PlyA +  65050  65055    6                               1.05

 5.04 PlyA -  65570  65565    6                               1.05
 5.03 Term -  66775  66707   69  1  0  108   42    65 0.579   0.86
 5.02 Intr -  88435  88283  153  1  0   49   16   182 0.628   6.45
 5.01 Init -  90364  90347   18  1  0   60   91    -5 0.309  -2.75
 5.00 Prom -  96074  96035   40                              -3.95

 6.00 Prom +  97051  97090   40                              -2.55
 6.01 Init +  99342  99587  246  2  0  100   42   183 0.966  12.55
 6.02 Intr +  99844 100040  197  0  2   58   88   122 0.869   6.49
 6.03 Intr + 104343 104427   85  0  1   33  119    74 0.881   3.90
 6.04 Intr + 104924 105032  109  1  1   69   87   -29 0.317  -5.96
 6.05 Intr + 106165 106278  114  2  0   84   92    71 0.763   6.60
 6.06 Intr + 106770 106834   65  1  2   71   74    56 0.779   0.02
 6.07 Intr + 109404 109489   86  2  2   89   86    70 0.969   4.60
 6.08 Intr + 112215 112272   58  0  1   67   93    68 0.966   3.17
 6.09 Intr + 126168 126253   86  2  2   68   79   136 0.994   8.40
 6.10 Intr + 126404 126463   60  2  0   81   80    71 0.842   2.53
 6.11 Intr + 132224 132305   82  2  1   91  100    59 0.989   6.12
 6.12 Intr + 133124 133234  111  1  0   66  101    27 0.720   1.46
 6.13 Intr + 133905 133988   84  2  0  112   29    45 0.464   0.10
 6.14 Intr + 135348 135452  105  2  0   65   92    57 0.809   3.29
 6.15 Term + 142854 142940   87  2  0   67   45    74 0.566  -2.32
 6.16 PlyA + 143231 143236    6                               1.05

 7.04 PlyA - 143251 143246    6                               1.05
 7.03 Term - 147118 147097   22  0  1   98   40    24 0.065  -4.59
 7.02 Intr - 158166 157299  868  1  1   75   53   182 0.440   2.87
 7.01 Init - 159077 158222  856  2  1   37   86   286 0.615  18.13
 7.00 Prom - 160348 160309   40                              -6.15

 8.02 PlyA - 160517 160512    6                               1.05
 8.01 Sngl - 161759 161430  330  2  0   88   44   306 0.945  21.97
 8.00 Prom - 169202 169163   40                              -4.65

 9.00 Prom + 176019 176058   40                              -1.65
 9.01 Init + 199299 199356   58  2  1   56   78    56 0.282   2.92
 9.02 Intr + 207373 207496  124  2  1  123   83    28 0.614   4.52
 9.03 Term + 208678 208852  175  1  1   32   55   141 0.600   1.45
 9.04 PlyA + 208960 208965    6                               1.05

10.00 Prom + 209555 209594   40                              -2.05
10.01 Init + 213818 213836   19  1  1  102   69    12 0.308   0.97
10.02 Intr + 222423 222481   59  1  2  122  116   -23 0.568   1.58
10.03 Term + 227244 227381  138  2  0  117   42   102 0.912   5.48
10.04 PlyA + 227743 227748    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  33121  32492  630  1  0   43   42   256 0.934  12.54
S.002 Init + 123319 123367   49  0  1   64  101    23 0.840   2.36
S.003 Intr + 123481 123530   50  2  2  103   56    49 0.834   0.68


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590f:108343659_108586595|GENSCAN_predicted_peptide_1|130_aa
MDTNQEEIPDLPEKEFGRVVIKLIKEAPKKGKVQFKKVAQQRQRDSICLGESKGKEQEFL
PDNPENSSGSYPRPPRWYLYESAKTTALLGLKSLQIPGKPSQERWAQTGPDCEDYNKCQT
LQCPDTDKHP

>gi568815590f:108343659_108586595|GENSCAN_predicted_CDS_1|393_bp
atggatacaaaccaagaagaaatccctgatttacctgaaaaagaatttggaagggtggtt
attaagctaatcaaggaggcaccaaagaaaggcaaagtccaatttaagaaagtggctcag
caaagacagagagattccatttgtttgggagaaagtaagggaaaagaacaagagtttctg
cctgataatccagagaattcttctggatcttatccaaggccaccaaggtggtacctctat
gagtctgcaaaaaccacagcattattgggcttgaagtcccttcaaatacctggaaaacct
tctcaagaaagatgggcacaaacaggtccagactgcgaagactacaataaatgccaaact
cttcaatgcccagacactgacaaacatccataa

>gi568815590f:108343659_108586595|GENSCAN_predicted_peptide_2|45_aa
MARAVHWPLLVMAGVAGTQGSFLRPSLEADAGTWLPVQPEEQRAN

>gi568815590f:108343659_108586595|GENSCAN_predicted_CDS_2|138_bp
atggcccgagctgtacattggccccttttagtcatggctggagtggctgggacacagggc
agcttcctcaggccctcactagaagcagatgctggcacctggcttcctgtacagcctgaa
gaacagcgagccaattaa

>gi568815590f:108343659_108586595|GENSCAN_predicted_peptide_3|222_aa
MGHIRTKTMRKVAWVIIEKYYTCLGNDFHTNKHVCEEIAIMPCKNLWNKIAACVTHLMEQ
TQRVPVTNDKNHMIISIDAEKAFDKIQQPFLLKPLNKLGIDGTYLKIIRAIHDKPTANII
LSRQKLEAFPLKTGKRQGCPLSPLLFNIVLEVLARAIRQEKEIKGIQLGREEVKLSLFAD
DMIVYLENPIASAHNLLKLISNFSSLRIQNQCAKITSIPIHQ

>gi568815590f:108343659_108586595|GENSCAN_predicted_CDS_3|669_bp
atgggccacattcgcaccaaaaccatgagaaaggtggcctgggtcattatagaaaagtac
tacacgtgcctgggcaatgacttccacaccaacaagcatgtgtgcgaggaaattgccatt
atgccctgcaagaatctctggaacaagatagcagcctgtgtaacccatctgatggagcag
actcagagggtcccagtaaccaatgacaaaaaccacatgattatctcaatagatgcagaa
aaggccttcgacaaaattcaacagcccttcctgctaaaacctctcaataaactaggcatt
gatggaacatatctcaaaataataagagctattcatgacaaacccacagccaatatcata
ctgagtaggcaaaagctggaagcattccctttgaaaaccggcaaaagacaaggatgccct
ctctcaccactcctattcaacatagtattggaagttctggccagggcaatcagacaagag
aaagaaataaagggtattcagttaggaagagaggaagtcaaattgtctctgttcgcagat
gacatgattgtatatttagaaaaccccatcgcctcagcccacaatctccttaagctgata
agcaactttagcagtctcaggatacaaaatcaatgtgcaaaaatcacaagcattcctata
caccaataa

>gi568815590f:108343659_108586595|GENSCAN_predicted_peptide_4|127_aa
MDEAGNHDSQKTITRTKNQTPHVLTHRWEPNNENTWTQEGEHHTLGPVVSGLSQEPPSPS
IGFLPQIFKFISVLEVTVLKKIIGYTFPSASRLPQTHLLPKTSKPKCEENHNDFQSKSHK
VGLSSDD

>gi568815590f:108343659_108586595|GENSCAN_predicted_CDS_4|384_bp
atggatgaagctggaaaccatgattctcagaaaactatcacaaggacaaaaaaccaaaca
ccgcatgttctcactcataggtgggaaccgaacaatgagaacacatggacacaggaaggg
gaacatcacacactggggcctgttgtgagtggcctttcccaagaacctccttcaccctct
ataggctttctcccacaaatattcaagtttatttccgtcctggaagtaacggtcctcaaa
aagataataggatatacttttccttctgcatcaaggctcccccaaactcaccttctccca
aaaacttctaaacctaaatgtgaagaaaatcataatgactttcaatctaaatctcacaag
gtggggctttctagtgatgattag

>gi568815590f:108343659_108586595|GENSCAN_predicted_peptide_5|79_aa
MNIGVQRNESPLTKELLFGLLHDPCITVQQILIEAICSNNMMIKQPFDLPSEEPKYHPTQ
HEDVEEDKDLCSDSFPVKE

>gi568815590f:108343659_108586595|GENSCAN_predicted_CDS_5|240_bp
atgaacataggggtgcagagaaatgaatctccgcttactaaagaactgttgtttgggctg
ctgcatgatccttgcatcacagttcagcagattctcatcgaagccatttgctctaataac
atgatgataaagcaaccctttgatttgccttccgaagaacctaaataccatcctactcaa
catgaagatgttgaagaggataaagacctttgtagtgattcatttccagttaaggaataa

>gi568815590f:108343659_108586595|GENSCAN_predicted_peptide_6|524_aa
MDEAMTGTTSVNEGYKLARGHSRELQSAKEESHLVSQNFGVYPFSRLKSERKANPITEGG
KLGTNKGFVQKAALRPAMKRIRPLRRAACTCVADTAPSALLANEKKLRNSPPPGGGSRDC
VSPPSHPAASRFWEDGEGLRALRCHLGSVWCPKLKGQADENTCSWVKDNSGACEELDMTF
SFLSSAIIVRPPQPRGTASPVKPLSFVNCPVSEMRDKMRKWREENSRNSEQIVEVGEELI
NEYASKLGDDIWIIYEQVMIAALDYGRDDLALFCLQELRRQFPGSHRVKRLTGMRFEAME
RYDDAIQLYDRILQEDPTNTAARKRKIAIRKAQGKNVEAIRELNEYLEQFVGDQEAWHEL
AELYINEHDYAKAAFCLEELMMTNPHNHLYCQQYAEVKYTQGGLENLELSRKYFAQALKL
NNRNMRALFGLYMLSEKELSEEMEIGRNKNETIFKKEWQNMSASHIASNPKASAKTKKDN
MKYASWAASQINRAYQFAGRSKKETKYSLKAVEDMLETLQITQS

>gi568815590f:108343659_108586595|GENSCAN_predicted_CDS_6|1575_bp
atggatgaagcaatgacaggcacgacgagcgttaatgaagggtataagctagcgcgaggg
cattcaagggaacttcagagcgcaaaggaagaatcccacttagtctctcaaaactttgga
gtttatccgtttagtcgattaaaaagtgaacggaaagcaaatcccattacggaaggagga
aagttggggacaaataagggattcgtgcagaaggctgcactgcggccggccatgaagaga
ataaggcccctccgcagagccgcgtgcacgtgcgtggcggataccgccccctctgctctc
ttggccaatgagaaaaagctacgtaactctccaccgcccggtggcgggtcacgtgactgc
gtctccccgccctctcaccccgctgcctctaggttctgggaagatggcgaaggtctcaga
gctttacgatgtcacttgggaagtgtttggtgtcctaaactcaagggccaagcagatgaa
aatacatgtagttgggtgaaagacaatagtggtgcctgtgaagaactggatatgactttt
tccttcttgtcttctgccatcattgtgaggcctccccagccacgtggaactgcaagtcca
gttaaacctctttcttttgtaaattgcccagtctcggaaatgagagataaaatgagaaaa
tggagagaagaaaactcaagaaatagtgagcaaattgtggaagttggagaagaattaatt
aatgaatatgcttctaagctgggagatgatatttggatcatatatgaacaggtgatgatt
gcagcactagactatggtcgggatgacttggcattgttttgtcttcaagagctgagaaga
cagttccctggcagtcacagagtcaagcgattaacaggcatgagatttgaagccatggaa
agatatgatgatgctatacagctatatgataggattttacaagaagatccaactaacact
gctgcaagaaagcgtaagattgccattcgaaaagcccaggggaaaaatgtggaggccatt
cgggagctgaatgagtatctggaacaatttgttggagaccaagaagcctggcatgaactt
gcagaactttacatcaatgaacatgactatgcaaaagcagccttttgtttagaggaacta
atgatgactaatccacacaaccacttatactgtcagcagtatgctgaagttaagtatacc
caaggtggacttgaaaacctcgaactttcaagaaagtattttgcacaggcattgaaactg
aacaacagaaatatgagagctttgtttggactttatatgctcagtgaaaaggaactgagt
gaagaaatggaaataggaagaaacaaaaatgaaacaatttttaaaaaggaatggcaaaat
atgtcggcaagtcatattgcttctaatccaaaagcaagtgcaaaaacgaaaaaggacaac
atgaaatatgctagttgggcagctagtcaaataaacagagcttatcagtttgcaggtcga
agtaagaaggaaaccaaatattctcttaaggctgtcgaagacatgttggaaacattgcag
atcacccagtcttaa

>gi568815590f:108343659_108586595|GENSCAN_predicted_peptide_7|581_aa
MNIDAKILNKILANRIQQHIKKLIHHDQVGFIPGMQGWFNICKSINVIQHINRTKDKNHM
IISIDAEKAFDKIQQCFMLKTFNKLGIDGMYLKIIRAIYDKPTANIILNGQKLEALPLKT
GTRQGCPLSPLLFNIVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDIIVYLENPIVPA
QNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTQSKIMSELPFTIASKKNKIPRNPTYK
GCEGSLQGELQTTAQGNKRGHKQMEEHSMLMGRKNQYHENGHTAQELEKTTLKFIWNQKR
ARIAKSILSQKNKAGGIMLPDFKLYYKATVTKTAWYWYQNRDIDQWNRTEVSEIMPHIYN
YLIFDKPEKNKQWGKDSLFNKWCWEHWLAICRKLKLDPFLTPYTKINSRWIKDLYVRPKT
IKTLEENLGNTIQDTGMGKDFMSKTPNPMATEAKIDKWDLMKLKSFCTAKETTIRVNRQP
TEWEKTFATYSSDKGLISRIYNELKQIYKKKANPIKQRAKDMNRHFSKEDIYAAKKHMKK
CSSSLAIREMQIKTTMRYHLTPVRMAIIKKSGNNRMYKAKL

>gi568815590f:108343659_108586595|GENSCAN_predicted_CDS_7|1746_bp
atgaacattgatgcaaaaatcctcaataaaatactggcaaaccgaatccagcaacacatc
aaaaagcttatccaccatgatcaagtgggcttcatccctgggatgcaaggctggttcaac
atatgcaaatcaataaacgtaatccagcatataaacagaaccaaagacaaaaaccacatg
attatctcaatagacgcagaaaaggcctttgacaaaatacaacaatgcttcatgctaaaa
actttcaataaattaggtattgatgggatgtatctcaaaataataagagctatctatgac
aaacccacagccaatatcatactgaatggacaaaaattggaagcactccctttgaaaact
ggcacaagacagggatgccctctctcaccactcctattcaacatagtgttggaagttctg
gccagggcaatcaggcaggagaaggaaataaaaggcattcaattaggaaaagaggaagtc
aaattgtccctgtttgcagatgacatcattgtgtatctagaaaaccccatcgtcccagcc
caaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgta
caaaaatcacaagcattcttatacaccaataacagacaaacacagagcaaaatcatgagt
gaactcccattcacaattgcttcaaagaaaaataaaatacctaggaatccaacttacaag
ggatgtgaaggatctcttcaaggagaactacaaaccactgctcaaggaaataaaagagga
cacaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatatcatgaaaat
ggccatactgcccaagaattggaaaaaactactttaaagttcatatggaaccaaaaaaga
gcccgcattgccaagtcaatcctaagccaaaagaacaaagctggaggcatcatgctacct
gacttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaac
agagatatagaccaatggaacagaacagaggtctcagaaataatgccacatatctacaac
tatctgatctttgacaaacctgagaaaaacaagcaatggggaaaggattccctatttaat
aaatggtgctgggaacactggctagccatatgtagaaagctgaaactggatcccttcctt
acaccttatacaaaaattaattcaagatggattaaagacttgtatgttagacctaaaacc
ataaaaaccctagaagaaaacctaggcaataccattcaggacacaggcatggggaaggac
ttcatgtctaaaacaccaaacccaatggcaacagaagccaaaattgacaaatgggatcta
atgaaactcaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacct
acagaatgggagaaaacttttgcaacctactcatctgacaaagggctaatatccagaatc
tacaatgaactcaaacaaatttacaagaaaaaagcaaaccccataaaacagagggcgaag
gatatgaacagacacttctcaaaagaagacatttatgcagccaaaaaacacatgaaaaaa
tgctcatcatcactggccatcagagaaatgcaaatcaaaaccacaatgagataccatctc
acaccagttagaatggcaatcattaaaaagtcaggaaacaacagaatgtataaagccaag
ttgtaa

>gi568815590f:108343659_108586595|GENSCAN_predicted_peptide_8|109_aa
MGKKQSRNTRNSKNQSASPPPKEHSSSPAMEQSWTENDFDELKEEGFRRSNYSELKEEVR
TNGKEVKNLEKKLDEWIPRITNAEKSLKDLMKLKTTARELRDKCTSLSS

>gi568815590f:108343659_108586595|GENSCAN_predicted_CDS_8|330_bp
atggggaaaaaacagagcagaaacaccagaaactctaaaaatcagagcgcctctcctcct
ccaaaggaacacagctcctcaccagcaatggaacaaagctggacggagaatgacttcgac
gagttgaaagaagaaggcttcagacgatcaaactactccgagctaaaggaggaagttcga
accaatggcaaagaagttaaaaaccttgaaaaaaaattagatgaatggatacctagaata
accaatgcagagaagtccttaaaggacctgatgaagctgaaaaccacggcacgagaacta
cgtgacaaatgcacaagcctcagtagctga

>gi568815590f:108343659_108586595|GENSCAN_predicted_peptide_9|118_aa
MNLQRKQRIRDGEAKPSDWGITAIVQLTGIWWKLEEFTSHSNLQFNKCNNCMTGAASSTV
SIGSAARVIRKEKEIKGIQIGKEEVKLFLFADSVTVYLENPIISAQKILQLMNNVSKV

>gi568815590f:108343659_108586595|GENSCAN_predicted_CDS_9|357_bp
atgaacctgcagaggaaacagaggatcagagatggagaagcaaaaccaagtgactgggga
atcacagctattgttcaactcactggaatttggtggaagttggaagagtttacatctcat
agtaatctacaattcaataaatgtaataattgcatgacaggagctgcttcctcaacagtg
agtattggaagtgctgccagggtaatcaggaaagagaaagaaataaagggcatccaaata
ggaaaagaggaagtcaaactattcctgtttgcagacagtgtgactgtatatctagaaaac
cctataatttcagcccaaaagatccttcagctgatgaacaacgtcagcaaagtttga

>gi568815590f:108343659_108586595|GENSCAN_predicted_peptide_10|71_aa
MAVMRGESFMFVLHNVKGFSLYIAGKVFQGWDDACPHYGEQIFFTSSTDSNVNLFQKHPF
HTSRTNVSPAI

>gi568815590f:108343659_108586595|GENSCAN_predicted_CDS_10|216_bp
atggctgtaatgaggggtgaatcttttatgtttgttctacataatgtcaaaggtttttct
ttgtatatagcaggaaaggtcttccaaggatgggatgatgcctgcccacattatggagag
cagatcttctttacttcgtctactgattcaaatgttaatctcttccagaaacaccctttt
cacacatccagaactaacgtttcaccagctatctaa