FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB8030, 562 aa 1>>>pF1KB8030 562 - 562 aa - 562 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.3485+/-0.000873; mu= 9.9998+/- 0.053 mean_var=124.7720+/-25.117, 0's: 0 Z-trim(109.8): 16 B-trim: 99 in 1/53 Lambda= 0.114820 statistics sampled from 11152 (11158) to 11152 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.695), E-opt: 0.2 (0.343), width: 16 Scan time: 3.540 The best scores are: opt bits E(32554) CCDS53938.1 WDR76 gene_id:79968|Hs108|chr15 ( 562) 3744 631.5 8.3e-181 CCDS10106.1 WDR76 gene_id:79968|Hs108|chr15 ( 626) 3744 631.5 9.1e-181 >>CCDS53938.1 WDR76 gene_id:79968|Hs108|chr15 (562 aa) initn: 3744 init1: 3744 opt: 3744 Z-score: 3359.5 bits: 631.5 E(32554): 8.3e-181 Smith-Waterman score: 3744; 100.0% identity (100.0% similar) in 562 aa overlap (1-562:1-562) 10 20 30 40 50 60 pF1KB8 MCPKSLSEKNSNNEVACKKTKIKKTCRRIIPPKMKNTSSKAESTLQNSSSAVHTESNKLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 MCPKSLSEKNSNNEVACKKTKIKKTCRRIIPPKMKNTSSKAESTLQNSSSAVHTESNKLQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB8 PKRTADAMNLSVDVESSQDGDSDEDTTPSLDFSGLSPYERKRLKNISENADFFASLQLSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 PKRTADAMNLSVDVESSQDGDSDEDTTPSLDFSGLSPYERKRLKNISENADFFASLQLSE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB8 SAARLREMIEKRQPPKSKRKKPKRENGIGCRRSMRLLKVDPSGVSLPAAPTPPTLVADET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 SAARLREMIEKRQPPKSKRKKPKRENGIGCRRSMRLLKVDPSGVSLPAAPTPPTLVADET 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB8 PLLPPGPLEMTSENQEDNNERFKGFLHTWAGMSKPSSKNTEKGLSSIKSYKANLNGMVIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 PLLPPGPLEMTSENQEDNNERFKGFLHTWAGMSKPSSKNTEKGLSSIKSYKANLNGMVIS 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB8 EDTVYKVTTGPIFSMALHPSETRTLVAVGAKFGQVGLCDLTQQPKEDGVYVFHPHSQPVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 EDTVYKVTTGPIFSMALHPSETRTLVAVGAKFGQVGLCDLTQQPKEDGVYVFHPHSQPVS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB8 CLYFSPANPAHILSLSYDGTLRCGDFSRAIFEEVYRNERSSFSSFDFLAEDASTLIVGHW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 CLYFSPANPAHILSLSYDGTLRCGDFSRAIFEEVYRNERSSFSSFDFLAEDASTLIVGHW 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB8 DGNMSLVDRRTPGTSYEKLTSSSMGKIRTVHVHPVHRQYFITAGLRDTHIYDARRLNSRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 DGNMSLVDRRTPGTSYEKLTSSSMGKIRTVHVHPVHRQYFITAGLRDTHIYDARRLNSRR 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB8 SQPLISLTEHTKSIASAYFSPLTGNRVVTTCADCNLRIFDSSCISSKIPLLTTIRHNTFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 SQPLISLTEHTKSIASAYFSPLTGNRVVTTCADCNLRIFDSSCISSKIPLLTTIRHNTFT 430 440 450 460 470 480 490 500 510 520 530 540 pF1KB8 GRWLTRFQAMWDPKQEDCVIVGSMAHPRRVEIFHETGKRVHSFGGEYLVSVCSINAMHPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 GRWLTRFQAMWDPKQEDCVIVGSMAHPRRVEIFHETGKRVHSFGGEYLVSVCSINAMHPT 490 500 510 520 530 540 550 560 pF1KB8 RYILAGGNSSGKIHVFMNEKSC :::::::::::::::::::::: CCDS53 RYILAGGNSSGKIHVFMNEKSC 550 560 >>CCDS10106.1 WDR76 gene_id:79968|Hs108|chr15 (626 aa) initn: 3744 init1: 3744 opt: 3744 Z-score: 3358.8 bits: 631.5 E(32554): 9.1e-181 Smith-Waterman score: 3744; 100.0% identity (100.0% similar) in 562 aa overlap (1-562:65-626) 10 20 30 pF1KB8 MCPKSLSEKNSNNEVACKKTKIKKTCRRII :::::::::::::::::::::::::::::: CCDS10 LRPAQTTVLIKTAKVYLAPFSLSNYQLDQLMCPKSLSEKNSNNEVACKKTKIKKTCRRII 40 50 60 70 80 90 40 50 60 70 80 90 pF1KB8 PPKMKNTSSKAESTLQNSSSAVHTESNKLQPKRTADAMNLSVDVESSQDGDSDEDTTPSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 PPKMKNTSSKAESTLQNSSSAVHTESNKLQPKRTADAMNLSVDVESSQDGDSDEDTTPSL 100 110 120 130 140 150 100 110 120 130 140 150 pF1KB8 DFSGLSPYERKRLKNISENADFFASLQLSESAARLREMIEKRQPPKSKRKKPKRENGIGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 DFSGLSPYERKRLKNISENADFFASLQLSESAARLREMIEKRQPPKSKRKKPKRENGIGC 160 170 180 190 200 210 160 170 180 190 200 210 pF1KB8 RRSMRLLKVDPSGVSLPAAPTPPTLVADETPLLPPGPLEMTSENQEDNNERFKGFLHTWA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 RRSMRLLKVDPSGVSLPAAPTPPTLVADETPLLPPGPLEMTSENQEDNNERFKGFLHTWA 220 230 240 250 260 270 220 230 240 250 260 270 pF1KB8 GMSKPSSKNTEKGLSSIKSYKANLNGMVISEDTVYKVTTGPIFSMALHPSETRTLVAVGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 GMSKPSSKNTEKGLSSIKSYKANLNGMVISEDTVYKVTTGPIFSMALHPSETRTLVAVGA 280 290 300 310 320 330 280 290 300 310 320 330 pF1KB8 KFGQVGLCDLTQQPKEDGVYVFHPHSQPVSCLYFSPANPAHILSLSYDGTLRCGDFSRAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 KFGQVGLCDLTQQPKEDGVYVFHPHSQPVSCLYFSPANPAHILSLSYDGTLRCGDFSRAI 340 350 360 370 380 390 340 350 360 370 380 390 pF1KB8 FEEVYRNERSSFSSFDFLAEDASTLIVGHWDGNMSLVDRRTPGTSYEKLTSSSMGKIRTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 FEEVYRNERSSFSSFDFLAEDASTLIVGHWDGNMSLVDRRTPGTSYEKLTSSSMGKIRTV 400 410 420 430 440 450 400 410 420 430 440 450 pF1KB8 HVHPVHRQYFITAGLRDTHIYDARRLNSRRSQPLISLTEHTKSIASAYFSPLTGNRVVTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 HVHPVHRQYFITAGLRDTHIYDARRLNSRRSQPLISLTEHTKSIASAYFSPLTGNRVVTT 460 470 480 490 500 510 460 470 480 490 500 510 pF1KB8 CADCNLRIFDSSCISSKIPLLTTIRHNTFTGRWLTRFQAMWDPKQEDCVIVGSMAHPRRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 CADCNLRIFDSSCISSKIPLLTTIRHNTFTGRWLTRFQAMWDPKQEDCVIVGSMAHPRRV 520 530 540 550 560 570 520 530 540 550 560 pF1KB8 EIFHETGKRVHSFGGEYLVSVCSINAMHPTRYILAGGNSSGKIHVFMNEKSC :::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 EIFHETGKRVHSFGGEYLVSVCSINAMHPTRYILAGGNSSGKIHVFMNEKSC 580 590 600 610 620 562 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 09:30:21 2016 done: Sun Nov 6 09:30:21 2016 Total Scan time: 3.540 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]