FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE9275, 268 aa 1>>>pF1KE9275 268 - 268 aa - 268 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 11.8693+/-0.000919; mu= -11.3510+/- 0.056 mean_var=380.9937+/-75.955, 0's: 0 Z-trim(117.9): 2 B-trim: 0 in 0/56 Lambda= 0.065708 statistics sampled from 18699 (18701) to 18699 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.832), E-opt: 0.2 (0.574), width: 16 Scan time: 2.540 The best scores are: opt bits E(32554) CCDS2626.1 EAF1 gene_id:85403|Hs108|chr3 ( 268) 1816 184.7 5.9e-47 CCDS3006.1 EAF2 gene_id:55840|Hs108|chr3 ( 260) 667 75.8 3.5e-14 >>CCDS2626.1 EAF1 gene_id:85403|Hs108|chr3 (268 aa) initn: 1816 init1: 1816 opt: 1816 Z-score: 956.5 bits: 184.7 E(32554): 5.9e-47 Smith-Waterman score: 1816; 99.3% identity (100.0% similar) in 268 aa overlap (1-268:1-268) 10 20 30 40 50 60 pF1KE9 MNGTANPLLDREEHCLRLGESFEKRPRASFHTIRYDFKPASIDTSCEGELQVGKGDEVTI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS26 MNGTANPLLDREEHCLRLGESFEKRPRASFHTIRYDFKPASIDTSCEGELQVGKGDEVTI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE9 TLPHIPGSTPPMTVFKGNKRPYQKDCVLIINHDTGEFVLEKLSSSIQVKKTRAEGSSKIQ ::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::: CCDS26 TLPHIPGSTPPMTVFKGNKRPYQKDCVLIINHDTGEYVLEKLSSSIQVKKTRAEGSSKIQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE9 ARMEQQPTRPPQTSQPPPPPPPMPFRAPTKPPVGPKTSPLKDNPSPEPQLDDIKRELRAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS26 ARMEQQPTRPPQTSQPPPPPPPMPFRAPTKPPVGPKTSPLKDNPSPEPQLDDIKRELRAE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE9 VDIIEQMSSSSGSSSSDSESSSGSDDDSSSSGGEDNGPASPPQPSHQQPYNSRPAVANGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS26 VDIIEQMSSSSGSSSSDSESSSGSDDDSSSSGGEDNGPASPPQPSHQQPYNSRPAVANGT 190 200 210 220 230 240 250 260 pF1KE9 SRPQGSNQLMNALRNDLQLSESGSDSDD :::::::::::.:::::::::::::::: CCDS26 SRPQGSNQLMNTLRNDLQLSESGSDSDD 250 260 >>CCDS3006.1 EAF2 gene_id:55840|Hs108|chr3 (260 aa) initn: 890 init1: 598 opt: 667 Z-score: 368.0 bits: 75.8 E(32554): 3.5e-14 Smith-Waterman score: 843; 54.5% identity (73.6% similar) in 277 aa overlap (1-268:1-260) 10 20 30 40 50 pF1KE9 MNGTAN-PLLDREEHCLRLGESFEKRPRASFHTIRYDFKPASIDTSCEGELQVGKGDEVT ::..:. :::.:. :.:::::::.:: .:::.:::::::::::: :: :.::.:..:: CCDS30 MNSAAGFSHLDRRERVLKLGESFEKQPRCAFHTVRYDFKPASIDTSSEGYLEVGEGEQVT 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE9 ITLPHIPGSTPPMTVFKGNKRPYQKDCVLIINHDTGEFVLEKLSSSIQVKKTRAEGSSKI ::::.: :::::.:::::.:.:: :.:.::::::::: ::::::.: :::::.:::::: CCDS30 ITLPNIEGSTPPVTVFKGSKKPYLKECILIINHDTGECRLEKLSSNITVKKTRVEGSSKI 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE9 QARMEQQPTRPPQTSQPPPPPPPMPFRAPTKPPVGPKTSPLKDNPSPEPQLDDIKRELRA : : ::: . ... . : : :: .:. :: .:::.:::.: CCDS30 QYRKEQQQQQMWNSA---------------RTPNLVKHSPSEDKMSPASPIDDIERELKA 130 140 150 160 180 190 200 210 220 230 pF1KE9 EVDIIEQMSSSSGSSSSDSESSSGSDDDSSSSGGED-------NGPASPPQPSHQQPYNS :.....:::: ..::.: : :::.:.:.::.: :: .: .:. : : CCDS30 EASLMDQMSSCDSSSDSKSSSSSSSEDSSSDSEDEDCKSSTSDTGNCVSGHPTMTQ-YRI 170 180 190 200 210 220 240 250 260 pF1KE9 RPAVANGTSRPQ-GSNQLMNALRNDLQLSESGSDSDD : . . .: . .:. :::.:::::::::::::::: CCDS30 -PDIDASHNRFRDNSGLLMNTLRNDLQLSESGSDSDD 230 240 250 260 268 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 10:23:04 2016 done: Tue Nov 8 10:23:04 2016 Total Scan time: 2.540 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]