FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4382, 403 aa 1>>>pF1KE4382 403 - 403 aa - 403 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3173+/-0.000864; mu= 16.6721+/- 0.052 mean_var=61.0677+/-12.226, 0's: 0 Z-trim(105.6): 17 B-trim: 0 in 0/51 Lambda= 0.164123 statistics sampled from 8501 (8503) to 8501 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.653), E-opt: 0.2 (0.261), width: 16 Scan time: 2.710 The best scores are: opt bits E(32554) CCDS47847.1 IDO1 gene_id:3620|Hs108|chr8 ( 403) 2708 649.8 1.3e-186 CCDS6114.2 IDO2 gene_id:169355|Hs108|chr8 ( 420) 1140 278.5 7.9e-75 >>CCDS47847.1 IDO1 gene_id:3620|Hs108|chr8 (403 aa) initn: 2708 init1: 2708 opt: 2708 Z-score: 3463.6 bits: 649.8 E(32554): 1.3e-186 Smith-Waterman score: 2708; 100.0% identity (100.0% similar) in 403 aa overlap (1-403:1-403) 10 20 30 40 50 60 pF1KE4 MAHAMENSWTISKEYHIDEEVGFALPNPQENLPDFYNDWMFIAKHLPDLIESGQLRERVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 MAHAMENSWTISKEYHIDEEVGFALPNPQENLPDFYNDWMFIAKHLPDLIESGQLRERVE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 KLNMLSIDHLTDHKSQRLARLVLGCITMAYVWGKGHGDVRKVLPRNIAVPYCQLSKKLEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 KLNMLSIDHLTDHKSQRLARLVLGCITMAYVWGKGHGDVRKVLPRNIAVPYCQLSKKLEL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 PPILVYADCVLANWKKKDPNKPLTYENMDVLFSFRDGDCSKGFFLVSLLVEIAAASAIKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 PPILVYADCVLANWKKKDPNKPLTYENMDVLFSFRDGDCSKGFFLVSLLVEIAAASAIKV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 IPTVFKAMQMQERDTLLKALLEIASCLEKALQVFHQIHDHVNPKAFFSVLRIYLSGWKGN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 IPTVFKAMQMQERDTLLKALLEIASCLEKALQVFHQIHDHVNPKAFFSVLRIYLSGWKGN 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 PQLSDGLVYEGFWEDPKEFAGGSAGQSSVFQCFDVLLGIQQTAGGGHAAQFLQDMRRYMP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 PQLSDGLVYEGFWEDPKEFAGGSAGQSSVFQCFDVLLGIQQTAGGGHAAQFLQDMRRYMP 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 PAHRNFLCSLESNPSVREFVLSKGDAGLREAYDACVKALVSLRSYHLQIVTKYILIPASQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 PAHRNFLCSLESNPSVREFVLSKGDAGLREAYDACVKALVSLRSYHLQIVTKYILIPASQ 310 320 330 340 350 360 370 380 390 400 pF1KE4 QPKENKTSEDPSKLEAKGTGGTDLMNFLKTVRSTTEKSLLKEG ::::::::::::::::::::::::::::::::::::::::::: CCDS47 QPKENKTSEDPSKLEAKGTGGTDLMNFLKTVRSTTEKSLLKEG 370 380 390 400 >>CCDS6114.2 IDO2 gene_id:169355|Hs108|chr8 (420 aa) initn: 1145 init1: 815 opt: 1140 Z-score: 1456.8 bits: 278.5 E(32554): 7.9e-75 Smith-Waterman score: 1140; 44.3% identity (75.5% similar) in 388 aa overlap (15-400:32-416) 10 20 30 40 pF1KE4 MAHAMENSWTISKEYHIDEEVGFALPNPQENLPDFYNDWMFIAK :::.:: :: ::. ..::: : :: ::. CCDS61 LHFHYYDTSNKIMEPHRPNVKTAVPLSLESYHISEEYGFLLPDSLKELPDHYRPWMEIAN 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE4 HLPDLIESGQLRERVEKLNMLSIDHLTDHKSQRLARLVLGCITMAYVWGKGHGDVRKVLP .::.::.. ::. .:.:. .:: . : :. ::::.:::. .::.::: .:... .::: CCDS61 KLPQLIDAHQLQAHVDKMPLLSCQFLKGHREQRLAHLVLSFLTMGYVWQEGEAQPAEVLP 70 80 90 100 110 120 110 120 130 140 150 160 pF1KE4 RNIAVPYCQLSKKLELPPILVYADCVLANWKKKDPNKPLTYENMDVLFSFRDGDCSKGFF ::.:.:. ..:..: ::::::..: ::.:: ::::. : :.....:: :. .::. CCDS61 RNLALPFVEVSRNLGLPPILVHSDLVLTNWTKKDPDGFLEIGNLETIISFPGGESLHGFI 130 140 150 160 170 180 170 180 190 200 210 220 pF1KE4 LVSLLVEIAAASAIKVIPTVFKAMQMQERDTLLKALLEIASCLEKALQVFHQIHDHVNPK ::. ::: :. .::.. . .:. . ....::.:: .. .. ... :.::.:.: CCDS61 LVTALVEKEAVPGIKALVQATNAILQPNQEALLQALQRLRLSIQDITKTLGQMHDYVDPD 190 200 210 220 230 240 230 240 250 260 270 280 pF1KE4 AFFSVLRIYLSGWKGNPQLSDGLVYEGFWEDPKEFAGGSAGQSSVFQCFDVLLGIQQTAG :.. .::.::::: :: . ::.::: ..: ...::::.::.:.. :: .:::... CCDS61 IFYAGIRIFLSGWKDNPAMPAGLMYEGVSQEPLKYSGGSAAQSTVLHAFDEFLGIRHSKE 250 260 270 280 290 300 290 300 310 320 330 340 pF1KE4 GGHAAQFLQDMRRYMPPAHRNFLCSLESNPSVREFVLSKGDAGLREAYDACVKALVSLRS .: .:: :: ::::.:. :. ...: ::.:...::.:. : ::. ::.::. ::: CCDS61 SG---DFLYRMRDYMPPSHKAFIEDIHSAPSLRDYILSSGQDHLLTAYNQCVQALAELRS 310 320 330 340 350 350 360 370 380 390 400 pF1KE4 YHLQIVTKYILIPASQ--QPKENKTSEDPSKLEAKGTGGTDLMNFLKTVRSTTEKSLLKE ::. .::::.. :.. . : :. :. :. .::::: .:.:::.::. : .:.: CCDS61 YHITMVTKYLITAAAKAKHGKPNHLPGPPQALKDRGTGGTAVMSFLKSVRDKTLESILHP 360 370 380 390 400 410 pF1KE4 G CCDS61 RG 420 403 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 22:58:38 2016 done: Sat Nov 5 22:58:39 2016 Total Scan time: 2.710 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]