FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1621, 135 aa 1>>>pF1KE1621 135 - 135 aa - 135 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3365+/-0.000736; mu= 11.4996+/- 0.044 mean_var=66.7234+/-13.544, 0's: 0 Z-trim(108.8): 15 B-trim: 0 in 0/52 Lambda= 0.157013 statistics sampled from 10429 (10433) to 10429 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.72), E-opt: 0.2 (0.32), width: 16 Scan time: 1.350 The best scores are: opt bits E(32554) CCDS34134.1 MED10 gene_id:84246|Hs108|chr5 ( 135) 892 210.2 3.2e-55 >>CCDS34134.1 MED10 gene_id:84246|Hs108|chr5 (135 aa) initn: 892 init1: 892 opt: 892 Z-score: 1104.8 bits: 210.2 E(32554): 3.2e-55 Smith-Waterman score: 892; 100.0% identity (100.0% similar) in 135 aa overlap (1-135:1-135) 10 20 30 40 50 60 pF1KE1 MAEKFDHLEEHLEKFVENIRQLGIIVSDFQPSSQAGLNQKLNFIVTGLQDIDKCRQQLHD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 MAEKFDHLEEHLEKFVENIRQLGIIVSDFQPSSQAGLNQKLNFIVTGLQDIDKCRQQLHD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 ITVPLEVFEYIDQGRNPQLYTKECLERALAKNEQVKGKIDTMKKFKSLLIQELSKVFPED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 ITVPLEVFEYIDQGRNPQLYTKECLERALAKNEQVKGKIDTMKKFKSLLIQELSKVFPED 70 80 90 100 110 120 130 pF1KE1 MAKYRSIRGEDHPPS ::::::::::::::: CCDS34 MAKYRSIRGEDHPPS 130 135 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 09:41:39 2016 done: Sun Nov 6 09:41:40 2016 Total Scan time: 1.350 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]