FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2737, 281 aa 1>>>pF1KE2737 281 - 281 aa - 281 aa Library: /omim/omim.rfq.tfa 65279912 residues in 92274 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.6961+/-0.00039; mu= 18.6057+/- 0.024 mean_var=64.8153+/-12.891, 0's: 0 Z-trim(111.9): 102 B-trim: 0 in 0/51 Lambda= 0.159307 statistics sampled from 21392 (21496) to 21392 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.597), E-opt: 0.2 (0.233), width: 16 Scan time: 3.210 The best scores are: opt bits E(92274) NP_001765 (OMIM: 151523) leukocyte antigen CD37 is ( 281) 1896 444.6 1.1e-124 XP_005259492 (OMIM: 151523) leukocyte antigen CD37 ( 365) 1752 411.6 1.2e-114 NP_001035120 (OMIM: 151523) leukocyte antigen CD37 ( 213) 1449 341.8 7.2e-94 XP_011525846 (OMIM: 151523) leukocyte antigen CD37 ( 213) 1449 341.8 7.2e-94 XP_016883002 (OMIM: 151523) leukocyte antigen CD37 ( 213) 1449 341.8 7.2e-94 XP_011525844 (OMIM: 151523) leukocyte antigen CD37 ( 297) 1305 308.8 8.5e-84 XP_011525845 (OMIM: 151523) leukocyte antigen CD37 ( 297) 1305 308.8 8.5e-84 XP_005259493 (OMIM: 151523) leukocyte antigen CD37 ( 297) 1305 308.8 8.5e-84 XP_006718286 (OMIM: 176807,600623) CD82 antigen is ( 267) 503 124.4 2.4e-28 NP_002222 (OMIM: 176807,600623) CD82 antigen isofo ( 267) 503 124.4 2.4e-28 NP_001020405 (OMIM: 602644) tetraspanin-4 isoform ( 238) 378 95.7 9.9e-20 NP_003262 (OMIM: 602644) tetraspanin-4 isoform a [ ( 238) 378 95.7 9.9e-20 XP_005253159 (OMIM: 602644) tetraspanin-4 isoform ( 238) 378 95.7 9.9e-20 NP_001020408 (OMIM: 602644) tetraspanin-4 isoform ( 238) 378 95.7 9.9e-20 NP_001020406 (OMIM: 602644) tetraspanin-4 isoform ( 238) 378 95.7 9.9e-20 NP_001020409 (OMIM: 602644) tetraspanin-4 isoform ( 238) 378 95.7 9.9e-20 NP_001020407 (OMIM: 602644) tetraspanin-4 isoform ( 238) 378 95.7 9.9e-20 NP_001035122 (OMIM: 151525) leukocyte surface anti ( 219) 334 85.5 1e-16 NP_000551 (OMIM: 151525) leukocyte surface antigen ( 219) 334 85.5 1e-16 XP_024304548 (OMIM: 179620,602243,609057) CD151 an ( 253) 329 84.4 2.5e-16 NP_004348 (OMIM: 179620,602243,609057) CD151 antig ( 253) 329 84.4 2.5e-16 NP_620599 (OMIM: 179620,602243,609057) CD151 antig ( 253) 329 84.4 2.5e-16 NP_001034579 (OMIM: 179620,602243,609057) CD151 an ( 253) 329 84.4 2.5e-16 NP_620598 (OMIM: 179620,602243,609057) CD151 antig ( 253) 329 84.4 2.5e-16 XP_011518369 (OMIM: 176807,600623) CD82 antigen is ( 236) 319 82.1 1.2e-15 NP_006666 (OMIM: 613137) tetraspanin-9 [Homo sapie ( 239) 313 80.7 3.1e-15 NP_001161792 (OMIM: 613137) tetraspanin-9 [Homo sa ( 239) 313 80.7 3.1e-15 XP_011518638 (OMIM: 602644) tetraspanin-4 isoform ( 269) 304 78.7 1.4e-14 NP_001020015 (OMIM: 176807,600623) CD82 antigen is ( 242) 298 77.3 3.4e-14 NP_005718 (OMIM: 613170) tetraspanin-1 [Homo sapie ( 241) 286 74.5 2.3e-13 XP_011538762 (OMIM: 613170) tetraspanin-1 isoform ( 258) 286 74.5 2.4e-13 NP_005715 (OMIM: 613134) tetraspanin-3 isoform 1 [ ( 253) 285 74.3 2.8e-13 NP_004347 (OMIM: 186845,613496) CD81 antigen isofo ( 236) 275 72.0 1.3e-12 NP_004607 (OMIM: 600769) tetraspanin-8 [Homo sapie ( 237) 273 71.5 1.8e-12 XP_016875402 (OMIM: 600769) tetraspanin-8 isoform ( 237) 273 71.5 1.8e-12 XP_006719646 (OMIM: 600769) tetraspanin-8 isoform ( 237) 273 71.5 1.8e-12 XP_024306825 (OMIM: 151525) leukocyte surface anti ( 218) 270 70.8 2.7e-12 NP_001760 (OMIM: 143030) CD9 antigen isoform 1 [Ho ( 228) 266 69.9 5.4e-12 XP_016877346 (OMIM: 613134) tetraspanin-3 isoform ( 214) 257 67.8 2.1e-11 NP_001307567 (OMIM: 151525) leukocyte surface anti ( 160) 249 65.9 6.2e-11 NP_005714 (OMIM: 613136) tetraspanin-5 [Homo sapie ( 268) 251 66.5 6.6e-11 XP_011518642 (OMIM: 602644) tetraspanin-4 isoform ( 174) 247 65.4 9e-11 NP_001020410 (OMIM: 602644) tetraspanin-4 isoform ( 174) 247 65.4 9e-11 XP_011518639 (OMIM: 602644) tetraspanin-4 isoform ( 174) 247 65.4 9e-11 XP_011518640 (OMIM: 602644) tetraspanin-4 isoform ( 174) 247 65.4 9e-11 XP_011518643 (OMIM: 602644) tetraspanin-4 isoform ( 174) 247 65.4 9e-11 XP_005253871 (OMIM: 143030) CD9 antigen isoform X1 ( 249) 233 62.3 1.1e-09 NP_001295245 (OMIM: 613133) tetraspanin-2 isoform ( 193) 228 61.1 2e-09 NP_005716 (OMIM: 613133) tetraspanin-2 isoform 1 [ ( 221) 228 61.2 2.2e-09 XP_006716023 (OMIM: 610120) tetraspanin-33 isoform ( 282) 225 60.6 4.3e-09 >>NP_001765 (OMIM: 151523) leukocyte antigen CD37 isofor (281 aa) initn: 1896 init1: 1896 opt: 1896 Z-score: 2360.4 bits: 444.6 E(92274): 1.1e-124 Smith-Waterman score: 1896; 100.0% identity (100.0% similar) in 281 aa overlap (1-281:1-281) 10 20 30 40 50 60 pF1KE2 MSAQESCLSLIKYFLFVFNLFFFVLGSLIFCFGIWILIDKTSFVSFVGLAFVPLQIWSKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MSAQESCLSLIKYFLFVFNLFFFVLGSLIFCFGIWILIDKTSFVSFVGLAFVPLQIWSKV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 LAISGIFTMGIALLGCVGALKELRCLLGLYFGMLLLLFATQITLGILISTQRAQLERSLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LAISGIFTMGIALLGCVGALKELRCLLGLYFGMLLLLFATQITLGILISTQRAQLERSLR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 DVVEKTIQKYGTNPEETAAEESWDYVQFQLRCCGWHYPQDWFQVLILRGNGSEAHRVPCS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DVVEKTIQKYGTNPEETAAEESWDYVQFQLRCCGWHYPQDWFQVLILRGNGSEAHRVPCS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 CYNLSATNDSTILDKVILPQLSRLGHLARSRHSADICAVPAESHIYREGCAQGLQKWLHN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 CYNLSATNDSTILDKVILPQLSRLGHLARSRHSADICAVPAESHIYREGCAQGLQKWLHN 190 200 210 220 230 240 250 260 270 280 pF1KE2 NLISIVGICLGVGLLELGFMTLSIFLCRNLDHVYNRLARYR ::::::::::::::::::::::::::::::::::::::::: NP_001 NLISIVGICLGVGLLELGFMTLSIFLCRNLDHVYNRLARYR 250 260 270 280 >>XP_005259492 (OMIM: 151523) leukocyte antigen CD37 iso (365 aa) initn: 1752 init1: 1752 opt: 1752 Z-score: 2180.0 bits: 411.6 E(92274): 1.2e-114 Smith-Waterman score: 1752; 97.4% identity (98.5% similar) in 268 aa overlap (1-268:1-268) 10 20 30 40 50 60 pF1KE2 MSAQESCLSLIKYFLFVFNLFFFVLGSLIFCFGIWILIDKTSFVSFVGLAFVPLQIWSKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MSAQESCLSLIKYFLFVFNLFFFVLGSLIFCFGIWILIDKTSFVSFVGLAFVPLQIWSKV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 LAISGIFTMGIALLGCVGALKELRCLLGLYFGMLLLLFATQITLGILISTQRAQLERSLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 LAISGIFTMGIALLGCVGALKELRCLLGLYFGMLLLLFATQITLGILISTQRAQLERSLR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 DVVEKTIQKYGTNPEETAAEESWDYVQFQLRCCGWHYPQDWFQVLILRGNGSEAHRVPCS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 DVVEKTIQKYGTNPEETAAEESWDYVQFQLRCCGWHYPQDWFQVLILRGNGSEAHRVPCS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 CYNLSATNDSTILDKVILPQLSRLGHLARSRHSADICAVPAESHIYREGCAQGLQKWLHN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 CYNLSATNDSTILDKVILPQLSRLGHLARSRHSADICAVPAESHIYREGCAQGLQKWLHN 190 200 210 220 230 240 250 260 270 280 pF1KE2 NLISIVGICLGVGLLELGFMTLSIFLCRNLDHVYNRLARYR ::::::::::::::::. :.::. : : XP_005 NLISIVGICLGVGLLEMTVMVLSVQLQRRALRRKCEPHVPGAGDSSPGPSLIADGGGGHS 250 260 270 280 290 300 >>NP_001035120 (OMIM: 151523) leukocyte antigen CD37 iso (213 aa) initn: 1449 init1: 1449 opt: 1449 Z-score: 1806.8 bits: 341.8 E(92274): 7.2e-94 Smith-Waterman score: 1449; 100.0% identity (100.0% similar) in 213 aa overlap (69-281:1-213) 40 50 60 70 80 90 pF1KE2 DKTSFVSFVGLAFVPLQIWSKVLAISGIFTMGIALLGCVGALKELRCLLGLYFGMLLLLF :::::::::::::::::::::::::::::: NP_001 MGIALLGCVGALKELRCLLGLYFGMLLLLF 10 20 30 100 110 120 130 140 150 pF1KE2 ATQITLGILISTQRAQLERSLRDVVEKTIQKYGTNPEETAAEESWDYVQFQLRCCGWHYP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ATQITLGILISTQRAQLERSLRDVVEKTIQKYGTNPEETAAEESWDYVQFQLRCCGWHYP 40 50 60 70 80 90 160 170 180 190 200 210 pF1KE2 QDWFQVLILRGNGSEAHRVPCSCYNLSATNDSTILDKVILPQLSRLGHLARSRHSADICA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QDWFQVLILRGNGSEAHRVPCSCYNLSATNDSTILDKVILPQLSRLGHLARSRHSADICA 100 110 120 130 140 150 220 230 240 250 260 270 pF1KE2 VPAESHIYREGCAQGLQKWLHNNLISIVGICLGVGLLELGFMTLSIFLCRNLDHVYNRLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VPAESHIYREGCAQGLQKWLHNNLISIVGICLGVGLLELGFMTLSIFLCRNLDHVYNRLA 160 170 180 190 200 210 280 pF1KE2 RYR ::: NP_001 RYR >>XP_011525846 (OMIM: 151523) leukocyte antigen CD37 iso (213 aa) initn: 1449 init1: 1449 opt: 1449 Z-score: 1806.8 bits: 341.8 E(92274): 7.2e-94 Smith-Waterman score: 1449; 100.0% identity (100.0% similar) in 213 aa overlap (69-281:1-213) 40 50 60 70 80 90 pF1KE2 DKTSFVSFVGLAFVPLQIWSKVLAISGIFTMGIALLGCVGALKELRCLLGLYFGMLLLLF :::::::::::::::::::::::::::::: XP_011 MGIALLGCVGALKELRCLLGLYFGMLLLLF 10 20 30 100 110 120 130 140 150 pF1KE2 ATQITLGILISTQRAQLERSLRDVVEKTIQKYGTNPEETAAEESWDYVQFQLRCCGWHYP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 ATQITLGILISTQRAQLERSLRDVVEKTIQKYGTNPEETAAEESWDYVQFQLRCCGWHYP 40 50 60 70 80 90 160 170 180 190 200 210 pF1KE2 QDWFQVLILRGNGSEAHRVPCSCYNLSATNDSTILDKVILPQLSRLGHLARSRHSADICA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 QDWFQVLILRGNGSEAHRVPCSCYNLSATNDSTILDKVILPQLSRLGHLARSRHSADICA 100 110 120 130 140 150 220 230 240 250 260 270 pF1KE2 VPAESHIYREGCAQGLQKWLHNNLISIVGICLGVGLLELGFMTLSIFLCRNLDHVYNRLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 VPAESHIYREGCAQGLQKWLHNNLISIVGICLGVGLLELGFMTLSIFLCRNLDHVYNRLA 160 170 180 190 200 210 280 pF1KE2 RYR ::: XP_011 RYR >>XP_016883002 (OMIM: 151523) leukocyte antigen CD37 iso (213 aa) initn: 1449 init1: 1449 opt: 1449 Z-score: 1806.8 bits: 341.8 E(92274): 7.2e-94 Smith-Waterman score: 1449; 100.0% identity (100.0% similar) in 213 aa overlap (69-281:1-213) 40 50 60 70 80 90 pF1KE2 DKTSFVSFVGLAFVPLQIWSKVLAISGIFTMGIALLGCVGALKELRCLLGLYFGMLLLLF :::::::::::::::::::::::::::::: XP_016 MGIALLGCVGALKELRCLLGLYFGMLLLLF 10 20 30 100 110 120 130 140 150 pF1KE2 ATQITLGILISTQRAQLERSLRDVVEKTIQKYGTNPEETAAEESWDYVQFQLRCCGWHYP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ATQITLGILISTQRAQLERSLRDVVEKTIQKYGTNPEETAAEESWDYVQFQLRCCGWHYP 40 50 60 70 80 90 160 170 180 190 200 210 pF1KE2 QDWFQVLILRGNGSEAHRVPCSCYNLSATNDSTILDKVILPQLSRLGHLARSRHSADICA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QDWFQVLILRGNGSEAHRVPCSCYNLSATNDSTILDKVILPQLSRLGHLARSRHSADICA 100 110 120 130 140 150 220 230 240 250 260 270 pF1KE2 VPAESHIYREGCAQGLQKWLHNNLISIVGICLGVGLLELGFMTLSIFLCRNLDHVYNRLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VPAESHIYREGCAQGLQKWLHNNLISIVGICLGVGLLELGFMTLSIFLCRNLDHVYNRLA 160 170 180 190 200 210 280 pF1KE2 RYR ::: XP_016 RYR >>XP_011525844 (OMIM: 151523) leukocyte antigen CD37 iso (297 aa) initn: 1305 init1: 1305 opt: 1305 Z-score: 1626.0 bits: 308.8 E(92274): 8.5e-84 Smith-Waterman score: 1305; 96.5% identity (98.0% similar) in 200 aa overlap (69-268:1-200) 40 50 60 70 80 90 pF1KE2 DKTSFVSFVGLAFVPLQIWSKVLAISGIFTMGIALLGCVGALKELRCLLGLYFGMLLLLF :::::::::::::::::::::::::::::: XP_011 MGIALLGCVGALKELRCLLGLYFGMLLLLF 10 20 30 100 110 120 130 140 150 pF1KE2 ATQITLGILISTQRAQLERSLRDVVEKTIQKYGTNPEETAAEESWDYVQFQLRCCGWHYP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 ATQITLGILISTQRAQLERSLRDVVEKTIQKYGTNPEETAAEESWDYVQFQLRCCGWHYP 40 50 60 70 80 90 160 170 180 190 200 210 pF1KE2 QDWFQVLILRGNGSEAHRVPCSCYNLSATNDSTILDKVILPQLSRLGHLARSRHSADICA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 QDWFQVLILRGNGSEAHRVPCSCYNLSATNDSTILDKVILPQLSRLGHLARSRHSADICA 100 110 120 130 140 150 220 230 240 250 260 270 pF1KE2 VPAESHIYREGCAQGLQKWLHNNLISIVGICLGVGLLELGFMTLSIFLCRNLDHVYNRLA ::::::::::::::::::::::::::::::::::::::. :.::. : : XP_011 VPAESHIYREGCAQGLQKWLHNNLISIVGICLGVGLLEMTVMVLSVQLQRRALRRKCEPH 160 170 180 190 200 210 280 pF1KE2 RYR XP_011 VPGAGDSSPGPSLIADGGGGHSGSLWGGWGMAGACPNWGDKAPQGKLPMALGLWPLWVQD 220 230 240 250 260 270 >>XP_011525845 (OMIM: 151523) leukocyte antigen CD37 iso (297 aa) initn: 1305 init1: 1305 opt: 1305 Z-score: 1626.0 bits: 308.8 E(92274): 8.5e-84 Smith-Waterman score: 1305; 96.5% identity (98.0% similar) in 200 aa overlap (69-268:1-200) 40 50 60 70 80 90 pF1KE2 DKTSFVSFVGLAFVPLQIWSKVLAISGIFTMGIALLGCVGALKELRCLLGLYFGMLLLLF :::::::::::::::::::::::::::::: XP_011 MGIALLGCVGALKELRCLLGLYFGMLLLLF 10 20 30 100 110 120 130 140 150 pF1KE2 ATQITLGILISTQRAQLERSLRDVVEKTIQKYGTNPEETAAEESWDYVQFQLRCCGWHYP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 ATQITLGILISTQRAQLERSLRDVVEKTIQKYGTNPEETAAEESWDYVQFQLRCCGWHYP 40 50 60 70 80 90 160 170 180 190 200 210 pF1KE2 QDWFQVLILRGNGSEAHRVPCSCYNLSATNDSTILDKVILPQLSRLGHLARSRHSADICA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 QDWFQVLILRGNGSEAHRVPCSCYNLSATNDSTILDKVILPQLSRLGHLARSRHSADICA 100 110 120 130 140 150 220 230 240 250 260 270 pF1KE2 VPAESHIYREGCAQGLQKWLHNNLISIVGICLGVGLLELGFMTLSIFLCRNLDHVYNRLA ::::::::::::::::::::::::::::::::::::::. :.::. : : XP_011 VPAESHIYREGCAQGLQKWLHNNLISIVGICLGVGLLEMTVMVLSVQLQRRALRRKCEPH 160 170 180 190 200 210 280 pF1KE2 RYR XP_011 VPGAGDSSPGPSLIADGGGGHSGSLWGGWGMAGACPNWGDKAPQGKLPMALGLWPLWVQD 220 230 240 250 260 270 >>XP_005259493 (OMIM: 151523) leukocyte antigen CD37 iso (297 aa) initn: 1305 init1: 1305 opt: 1305 Z-score: 1626.0 bits: 308.8 E(92274): 8.5e-84 Smith-Waterman score: 1305; 96.5% identity (98.0% similar) in 200 aa overlap (69-268:1-200) 40 50 60 70 80 90 pF1KE2 DKTSFVSFVGLAFVPLQIWSKVLAISGIFTMGIALLGCVGALKELRCLLGLYFGMLLLLF :::::::::::::::::::::::::::::: XP_005 MGIALLGCVGALKELRCLLGLYFGMLLLLF 10 20 30 100 110 120 130 140 150 pF1KE2 ATQITLGILISTQRAQLERSLRDVVEKTIQKYGTNPEETAAEESWDYVQFQLRCCGWHYP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 ATQITLGILISTQRAQLERSLRDVVEKTIQKYGTNPEETAAEESWDYVQFQLRCCGWHYP 40 50 60 70 80 90 160 170 180 190 200 210 pF1KE2 QDWFQVLILRGNGSEAHRVPCSCYNLSATNDSTILDKVILPQLSRLGHLARSRHSADICA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 QDWFQVLILRGNGSEAHRVPCSCYNLSATNDSTILDKVILPQLSRLGHLARSRHSADICA 100 110 120 130 140 150 220 230 240 250 260 270 pF1KE2 VPAESHIYREGCAQGLQKWLHNNLISIVGICLGVGLLELGFMTLSIFLCRNLDHVYNRLA ::::::::::::::::::::::::::::::::::::::. :.::. : : XP_005 VPAESHIYREGCAQGLQKWLHNNLISIVGICLGVGLLEMTVMVLSVQLQRRALRRKCEPH 160 170 180 190 200 210 280 pF1KE2 RYR XP_005 VPGAGDSSPGPSLIADGGGGHSGSLWGGWGMAGACPNWGDKAPQGKLPMALGLWPLWVQD 220 230 240 250 260 270 >>XP_006718286 (OMIM: 176807,600623) CD82 antigen isofor (267 aa) initn: 640 init1: 341 opt: 503 Z-score: 630.4 bits: 124.4 E(92274): 2.4e-28 Smith-Waterman score: 630; 36.6% identity (68.5% similar) in 276 aa overlap (6-280:4-267) 10 20 30 40 50 60 pF1KE2 MSAQESCLSLIKYFLFVFNLFFFVLGSLIFCFGIWILIDKTSFVSFVGLAFVPLQIWSKV .:... :::::.:::.::.::..:. ::.::: ::.::.: . . :.. . : XP_006 MGSACIKVTKYFLFLFNLIFFILGAVILGFGVWILADKSSFISVLQTSSSSLRMGAYV 10 20 30 40 50 70 80 90 100 110 120 pF1KE2 LAISGIFTMGIALLGCVGALKELRCLLGLYFGMLLLLFATQITLGILISTQRAQLERSLR . : :: ...:::.::..:.::::::::..:::.. .:.: : :. . ..:.. . XP_006 FIGVGAVTMLMGFLGCIGAVNEVRCLLGLYFAFLLLILIAQVTAGALFYFNMGKLKQEMG 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE2 DVVEKTIQKYGTNPEETAAEESWDYVQFQLRCCGWHYPQDWFQVLILRGNGSEAHRVPCS .: . :. :... :.. ...::::: :..:::: .: . : : :. ::: XP_006 GIVTELIRDYNSSREDSL-QDAWDYVQAQVKCCGWVSFYNWTDNAELM-NRPEV-TYPCS 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE2 CYNLSATNDSTILDKVILPQLSRLGHLARSRHSADICAVPAESHIYREGCAQGLQKWLHN : .... .:... : : . .. : . .:.::: . .: ::.. XP_006 C-EVKGEEDNSLS--------VRKGFCEAPGNRTQSGNHPEDWPVYQEGCMEKVQAWLQE 180 190 200 210 220 250 260 270 280 pF1KE2 NLISIVGICLGVGLLELGFMTLSIFLCRNL-DHVYNRLARYR :: :.:. .::...:: :.::: :::.. .. :... .: XP_006 NLGIILGVGVGVAIIELLGMVLSICLCRHVHSEDYSKVPKY 230 240 250 260 >>NP_002222 (OMIM: 176807,600623) CD82 antigen isoform 1 (267 aa) initn: 640 init1: 341 opt: 503 Z-score: 630.4 bits: 124.4 E(92274): 2.4e-28 Smith-Waterman score: 630; 36.6% identity (68.5% similar) in 276 aa overlap (6-280:4-267) 10 20 30 40 50 60 pF1KE2 MSAQESCLSLIKYFLFVFNLFFFVLGSLIFCFGIWILIDKTSFVSFVGLAFVPLQIWSKV .:... :::::.:::.::.::..:. ::.::: ::.::.: . . :.. . : NP_002 MGSACIKVTKYFLFLFNLIFFILGAVILGFGVWILADKSSFISVLQTSSSSLRMGAYV 10 20 30 40 50 70 80 90 100 110 120 pF1KE2 LAISGIFTMGIALLGCVGALKELRCLLGLYFGMLLLLFATQITLGILISTQRAQLERSLR . : :: ...:::.::..:.::::::::..:::.. .:.: : :. . ..:.. . NP_002 FIGVGAVTMLMGFLGCIGAVNEVRCLLGLYFAFLLLILIAQVTAGALFYFNMGKLKQEMG 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE2 DVVEKTIQKYGTNPEETAAEESWDYVQFQLRCCGWHYPQDWFQVLILRGNGSEAHRVPCS .: . :. :... :.. ...::::: :..:::: .: . : : :. ::: NP_002 GIVTELIRDYNSSREDSL-QDAWDYVQAQVKCCGWVSFYNWTDNAELM-NRPEV-TYPCS 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE2 CYNLSATNDSTILDKVILPQLSRLGHLARSRHSADICAVPAESHIYREGCAQGLQKWLHN : .... .:... : : . .. : . .:.::: . .: ::.. NP_002 C-EVKGEEDNSLS--------VRKGFCEAPGNRTQSGNHPEDWPVYQEGCMEKVQAWLQE 180 190 200 210 220 250 260 270 280 pF1KE2 NLISIVGICLGVGLLELGFMTLSIFLCRNL-DHVYNRLARYR :: :.:. .::...:: :.::: :::.. .. :... .: NP_002 NLGIILGVGVGVAIIELLGMVLSICLCRHVHSEDYSKVPKY 230 240 250 260 281 residues in 1 query sequences 65279912 residues in 92274 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Thu Dec 20 16:33:02 2018 done: Thu Dec 20 16:33:03 2018 Total Scan time: 3.210 Total Display time: 0.060 Function used was FASTA [36.3.4 Apr, 2011]