FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1723, 234 aa 1>>>pF1KE1723 234 - 234 aa - 234 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.2881+/-0.000698; mu= 14.7454+/- 0.042 mean_var=65.5186+/-13.346, 0's: 0 Z-trim(109.8): 7 B-trim: 384 in 2/47 Lambda= 0.158450 statistics sampled from 11163 (11167) to 11163 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.724), E-opt: 0.2 (0.343), width: 16 Scan time: 2.260 The best scores are: opt bits E(32554) CCDS11754.1 TK1 gene_id:7083|Hs108|chr17 ( 234) 1573 367.7 3.6e-102 >>CCDS11754.1 TK1 gene_id:7083|Hs108|chr17 (234 aa) initn: 1573 init1: 1573 opt: 1573 Z-score: 1947.8 bits: 367.7 E(32554): 3.6e-102 Smith-Waterman score: 1573; 100.0% identity (100.0% similar) in 234 aa overlap (1-234:1-234) 10 20 30 40 50 60 pF1KE1 MSCINLPTVLPGSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 MSCINLPTVLPGSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 YSSSFCTHDRNTMEALPACLLRDVAQEALGVAVIGIDEGQFFPDIVEFCEAMANAGKTVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 YSSSFCTHDRNTMEALPACLLRDVAQEALGVAVIGIDEGQFFPDIVEFCEAMANAGKTVI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 VAALDGTFQRKPFGAILNLVPLAESVVKLTAVCMECFREAAYTKRLGTEKEVEVIGGADK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 VAALDGTFQRKPFGAILNLVPLAESVVKLTAVCMECFREAAYTKRLGTEKEVEVIGGADK 130 140 150 160 170 180 190 200 210 220 230 pF1KE1 YHSVCRLCYFKKASGQPAGPDNKENCPVPGKPGEAVAARKLFAPQQILQCSPAN :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 YHSVCRLCYFKKASGQPAGPDNKENCPVPGKPGEAVAARKLFAPQQILQCSPAN 190 200 210 220 230 234 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 09:47:22 2016 done: Sun Nov 6 09:47:22 2016 Total Scan time: 2.260 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]