FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB3007, 1249 aa 1>>>pF1KB3007 1249 - 1249 aa - 1249 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.0510+/-0.00101; mu= 18.5444+/- 0.061 mean_var=73.3371+/-14.650, 0's: 0 Z-trim(104.2): 20 B-trim: 0 in 0/51 Lambda= 0.149766 statistics sampled from 7772 (7778) to 7772 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.602), E-opt: 0.2 (0.239), width: 16 Scan time: 2.900 The best scores are: opt bits E(32554) CCDS9502.1 TPP2 gene_id:7174|Hs108|chr13 (1249) 8400 1825.1 0 CCDS81777.1 TPP2 gene_id:7174|Hs108|chr13 (1262) 6621 1440.7 0 >>CCDS9502.1 TPP2 gene_id:7174|Hs108|chr13 (1249 aa) initn: 8400 init1: 8400 opt: 8400 Z-score: 9798.0 bits: 1825.1 E(32554): 0 Smith-Waterman score: 8400; 100.0% identity (100.0% similar) in 1249 aa overlap (1-1249:1-1249) 10 20 30 40 50 60 pF1KB3 MATAATEEPFPFHGLLPKKETGAASFLCRYPEYDGRGVLIAVLDTGVDPGAPGMQVTTDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 MATAATEEPFPFHGLLPKKETGAASFLCRYPEYDGRGVLIAVLDTGVDPGAPGMQVTTDG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB3 KPKIVDIIDTTGSGDVNTATEVEPKDGEIVGLSGRVLKIPASWTNPSGKYHIGIKNGYDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 KPKIVDIIDTTGSGDVNTATEVEPKDGEIVGLSGRVLKIPASWTNPSGKYHIGIKNGYDF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB3 YPKALKERIQKERKEKIWDPVHRVALAEACRKQEEFDVANNGSSQANKLIKEELQSQVEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 YPKALKERIQKERKEKIWDPVHRVALAEACRKQEEFDVANNGSSQANKLIKEELQSQVEL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB3 LNSFEKKYSDPGPVYDCLVWHDGEVWRACIDSNEDGDLSKSTVLRNYKEAQEYGSFGTAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 LNSFEKKYSDPGPVYDCLVWHDGEVWRACIDSNEDGDLSKSTVLRNYKEAQEYGSFGTAE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB3 MLNYSVNIYDDGNLLSIVTSGGAHGTHVASIAAGHFPEEPERNGVAPGAQILSIKIGDTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 MLNYSVNIYDDGNLLSIVTSGGAHGTHVASIAAGHFPEEPERNGVAPGAQILSIKIGDTR 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB3 LSTMETGTGLIRAMIEVINHKCDLVNYSYGEATHWPNSGRICEVINEAVWKHNIIYVSSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 LSTMETGTGLIRAMIEVINHKCDLVNYSYGEATHWPNSGRICEVINEAVWKHNIIYVSSA 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB3 GNNGPCLSTVGCPGGTTSSVIGVGAYVSPDMMVAEYSLREKLPANQYTWSSRGPSADGAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 GNNGPCLSTVGCPGGTTSSVIGVGAYVSPDMMVAEYSLREKLPANQYTWSSRGPSADGAL 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB3 GVSISAPGGAIASVPNWTLRGTQLMNGTSMSSPNACGGIALILSGLKANNIDYTVHSVRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 GVSISAPGGAIASVPNWTLRGTQLMNGTSMSSPNACGGIALILSGLKANNIDYTVHSVRR 430 440 450 460 470 480 490 500 510 520 530 540 pF1KB3 ALENTAVKADNIEVFAQGHGIIQVDKAYDYLVQNTSFANKLGFTVTVGNNRGIYLRDPVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 ALENTAVKADNIEVFAQGHGIIQVDKAYDYLVQNTSFANKLGFTVTVGNNRGIYLRDPVQ 490 500 510 520 530 540 550 560 570 580 590 600 pF1KB3 VAAPSDHGVGIEPVFPENTENSEKISLQLHLALTSNSSWVQCPSHLELMNQCRHINIRVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 VAAPSDHGVGIEPVFPENTENSEKISLQLHLALTSNSSWVQCPSHLELMNQCRHINIRVD 550 560 570 580 590 600 610 620 630 640 650 660 pF1KB3 PRGLREGLHYTEVCGYDIASPNAGPLFRVPITAVIAAKVNESSHYDLAFTDVHFKPGQIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 PRGLREGLHYTEVCGYDIASPNAGPLFRVPITAVIAAKVNESSHYDLAFTDVHFKPGQIR 610 620 630 640 650 660 670 680 690 700 710 720 pF1KB3 RHFIEVPEGATWAEVTVCSCSSEVSAKFVLHAVQLVKQRAYRSHEFYKFCSLPEKGTLTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 RHFIEVPEGATWAEVTVCSCSSEVSAKFVLHAVQLVKQRAYRSHEFYKFCSLPEKGTLTE 670 680 690 700 710 720 730 740 750 760 770 780 pF1KB3 AFPVLGGKAIEFCIARWWASLSDVNIDYTISFHGIVCTAPQLNIHASEGINRFDVQSSLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 AFPVLGGKAIEFCIARWWASLSDVNIDYTISFHGIVCTAPQLNIHASEGINRFDVQSSLK 730 740 750 760 770 780 790 800 810 820 830 840 pF1KB3 YEDLAPCITLKNWVQTLRPVSAKTKPLGSRDVLPNNRQLYEMVLTYNFHQPKSGEVTPSC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 YEDLAPCITLKNWVQTLRPVSAKTKPLGSRDVLPNNRQLYEMVLTYNFHQPKSGEVTPSC 790 800 810 820 830 840 850 860 870 880 890 900 pF1KB3 PLLCELLYESEFDSQLWIIFDQNKRQMGSGDAYPHQYSLKLEKGDYTIRLQIRHEQISDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 PLLCELLYESEFDSQLWIIFDQNKRQMGSGDAYPHQYSLKLEKGDYTIRLQIRHEQISDL 850 860 870 880 890 900 910 920 930 940 950 960 pF1KB3 ERLKDLPFIVSHRLSNTLSLDIHENHSFALLGKKKSSNLTLPPKYNQPFFVTSLPDDKIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 ERLKDLPFIVSHRLSNTLSLDIHENHSFALLGKKKSSNLTLPPKYNQPFFVTSLPDDKIP 910 920 930 940 950 960 970 980 990 1000 1010 1020 pF1KB3 KGAGPGCYLAGSLTLSKTELGKKADVIPVHYYLIPPPTKTKNGSKDKEKDSEKEKDLKEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 KGAGPGCYLAGSLTLSKTELGKKADVIPVHYYLIPPPTKTKNGSKDKEKDSEKEKDLKEE 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 pF1KB3 FTEALRDLKIQWMTKLDSSDIYNELKETYPNYLPLYVARLHQLDAEKERMKRLNEIVDAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 FTEALRDLKIQWMTKLDSSDIYNELKETYPNYLPLYVARLHQLDAEKERMKRLNEIVDAA 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 pF1KB3 NAVISHIDQTALAVYIAMKTDPRPDAATIKNDMDKQKSTLVDALCRKGCALADHLLHTQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 NAVISHIDQTALAVYIAMKTDPRPDAATIKNDMDKQKSTLVDALCRKGCALADHLLHTQA 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 pF1KB3 QDGAISTDAEGKEEEGESPLDSLAETFWETTKWTDLFDNKVLTFAYKHALVNKMYGRGLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 QDGAISTDAEGKEEEGESPLDSLAETFWETTKWTDLFDNKVLTFAYKHALVNKMYGRGLK 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 pF1KB3 FATKLVEEKPTKENWKNCIQLMKLLGWTHCASFTENWLPIMYPPDYCVF ::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 FATKLVEEKPTKENWKNCIQLMKLLGWTHCASFTENWLPIMYPPDYCVF 1210 1220 1230 1240 >>CCDS81777.1 TPP2 gene_id:7174|Hs108|chr13 (1262 aa) initn: 6616 init1: 6616 opt: 6621 Z-score: 7720.5 bits: 1440.7 E(32554): 0 Smith-Waterman score: 8364; 99.0% identity (99.0% similar) in 1262 aa overlap (1-1249:1-1262) 10 20 30 40 50 60 pF1KB3 MATAATEEPFPFHGLLPKKETGAASFLCRYPEYDGRGVLIAVLDTGVDPGAPGMQVTTDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 MATAATEEPFPFHGLLPKKETGAASFLCRYPEYDGRGVLIAVLDTGVDPGAPGMQVTTDG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB3 KPKIVDIIDTTGSGDVNTATEVEPKDGEIVGLSGRVLKIPASWTNPSGKYHIGIKNGYDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 KPKIVDIIDTTGSGDVNTATEVEPKDGEIVGLSGRVLKIPASWTNPSGKYHIGIKNGYDF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB3 YPKALKERIQKERKEKIWDPVHRVALAEACRKQEEFDVANNGSSQANKLIKEELQSQVEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 YPKALKERIQKERKEKIWDPVHRVALAEACRKQEEFDVANNGSSQANKLIKEELQSQVEL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB3 LNSFEKKYSDPGPVYDCLVWHDGEVWRACIDSNEDGDLSKSTVLRNYKEAQEYGSFGTAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 LNSFEKKYSDPGPVYDCLVWHDGEVWRACIDSNEDGDLSKSTVLRNYKEAQEYGSFGTAE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB3 MLNYSVNIYDDGNLLSIVTSGGAHGTHVASIAAGHFPEEPERNGVAPGAQILSIKIGDTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 MLNYSVNIYDDGNLLSIVTSGGAHGTHVASIAAGHFPEEPERNGVAPGAQILSIKIGDTR 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB3 LSTMETGTGLIRAMIEVINHKCDLVNYSYGEATHWPNSGRICEVINEAVWKHNIIYVSSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 LSTMETGTGLIRAMIEVINHKCDLVNYSYGEATHWPNSGRICEVINEAVWKHNIIYVSSA 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB3 GNNGPCLSTVGCPGGTTSSVIGVGAYVSPDMMVAEYSLREKLPANQYTWSSRGPSADGAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 GNNGPCLSTVGCPGGTTSSVIGVGAYVSPDMMVAEYSLREKLPANQYTWSSRGPSADGAL 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB3 GVSISAPGGAIASVPNWTLRGTQLMNGTSMSSPNACGGIALILSGLKANNIDYTVHSVRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 GVSISAPGGAIASVPNWTLRGTQLMNGTSMSSPNACGGIALILSGLKANNIDYTVHSVRR 430 440 450 460 470 480 490 500 510 520 530 540 pF1KB3 ALENTAVKADNIEVFAQGHGIIQVDKAYDYLVQNTSFANKLGFTVTVGNNRGIYLRDPVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 ALENTAVKADNIEVFAQGHGIIQVDKAYDYLVQNTSFANKLGFTVTVGNNRGIYLRDPVQ 490 500 510 520 530 540 550 560 570 580 590 600 pF1KB3 VAAPSDHGVGIEPVFPENTENSEKISLQLHLALTSNSSWVQCPSHLELMNQCRHINIRVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 VAAPSDHGVGIEPVFPENTENSEKISLQLHLALTSNSSWVQCPSHLELMNQCRHINIRVD 550 560 570 580 590 600 610 620 630 640 650 660 pF1KB3 PRGLREGLHYTEVCGYDIASPNAGPLFRVPITAVIAAKVNESSHYDLAFTDVHFKPGQIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 PRGLREGLHYTEVCGYDIASPNAGPLFRVPITAVIAAKVNESSHYDLAFTDVHFKPGQIR 610 620 630 640 650 660 670 680 690 700 710 720 pF1KB3 RHFIEVPEGATWAEVTVCSCSSEVSAKFVLHAVQLVKQRAYRSHEFYKFCSLPEKGTLTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 RHFIEVPEGATWAEVTVCSCSSEVSAKFVLHAVQLVKQRAYRSHEFYKFCSLPEKGTLTE 670 680 690 700 710 720 730 740 750 760 770 780 pF1KB3 AFPVLGGKAIEFCIARWWASLSDVNIDYTISFHGIVCTAPQLNIHASEGINRFDVQSSLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 AFPVLGGKAIEFCIARWWASLSDVNIDYTISFHGIVCTAPQLNIHASEGINRFDVQSSLK 730 740 750 760 770 780 790 800 810 820 830 840 pF1KB3 YEDLAPCITLKNWVQTLRPVSAKTKPLGSRDVLPNNRQLYEMVLTYNFHQPKSGEVTPSC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 YEDLAPCITLKNWVQTLRPVSAKTKPLGSRDVLPNNRQLYEMVLTYNFHQPKSGEVTPSC 790 800 810 820 830 840 850 860 870 880 890 900 pF1KB3 PLLCELLYESEFDSQLWIIFDQNKRQMGSGDAYPHQYSLKLEKGDYTIRLQIRHEQISDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 PLLCELLYESEFDSQLWIIFDQNKRQMGSGDAYPHQYSLKLEKGDYTIRLQIRHEQISDL 850 860 870 880 890 900 910 920 930 940 950 960 pF1KB3 ERLKDLPFIVSHRLSNTLSLDIHENHSFALLGKKKSSNLTLPPKYNQPFFVTSLPDDKIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 ERLKDLPFIVSHRLSNTLSLDIHENHSFALLGKKKSSNLTLPPKYNQPFFVTSLPDDKIP 910 920 930 940 950 960 970 980 990 1000 pF1KB3 KGAGPGCYLAGSLTLSKTELGKKA-------------DVIPVHYYLIPPPTKTKNGSKDK :::::::::::::::::::::::: ::::::::::::::::::::::: CCDS81 KGAGPGCYLAGSLTLSKTELGKKAGQSAAKRQGKFKKDVIPVHYYLIPPPTKTKNGSKDK 970 980 990 1000 1010 1020 1010 1020 1030 1040 1050 1060 pF1KB3 EKDSEKEKDLKEEFTEALRDLKIQWMTKLDSSDIYNELKETYPNYLPLYVARLHQLDAEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 EKDSEKEKDLKEEFTEALRDLKIQWMTKLDSSDIYNELKETYPNYLPLYVARLHQLDAEK 1030 1040 1050 1060 1070 1080 1070 1080 1090 1100 1110 1120 pF1KB3 ERMKRLNEIVDAANAVISHIDQTALAVYIAMKTDPRPDAATIKNDMDKQKSTLVDALCRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 ERMKRLNEIVDAANAVISHIDQTALAVYIAMKTDPRPDAATIKNDMDKQKSTLVDALCRK 1090 1100 1110 1120 1130 1140 1130 1140 1150 1160 1170 1180 pF1KB3 GCALADHLLHTQAQDGAISTDAEGKEEEGESPLDSLAETFWETTKWTDLFDNKVLTFAYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 GCALADHLLHTQAQDGAISTDAEGKEEEGESPLDSLAETFWETTKWTDLFDNKVLTFAYK 1150 1160 1170 1180 1190 1200 1190 1200 1210 1220 1230 1240 pF1KB3 HALVNKMYGRGLKFATKLVEEKPTKENWKNCIQLMKLLGWTHCASFTENWLPIMYPPDYC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 HALVNKMYGRGLKFATKLVEEKPTKENWKNCIQLMKLLGWTHCASFTENWLPIMYPPDYC 1210 1220 1230 1240 1250 1260 pF1KB3 VF :: CCDS81 VF 1249 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 07:00:25 2016 done: Tue Nov 8 07:00:25 2016 Total Scan time: 2.900 Total Display time: 0.140 Function used was FASTA [36.3.4 Apr, 2011]