FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5579, 355 aa 1>>>pF1KE5579 355 - 355 aa - 355 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.2141+/-0.000389; mu= 2.9222+/- 0.024 mean_var=141.5431+/-27.727, 0's: 0 Z-trim(116.7): 30 B-trim: 0 in 0/55 Lambda= 0.107803 statistics sampled from 28028 (28051) to 28028 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.693), E-opt: 0.2 (0.329), width: 16 Scan time: 5.700 The best scores are: opt bits E(85289) NP_001129467 (OMIM: 300920) ataxin-3-like protein ( 355) 2353 377.4 2.7e-104 NP_004984 (OMIM: 109150,607047) ataxin-3 reference ( 361) 1612 262.1 1.3e-69 NP_109376 (OMIM: 109150,607047) ataxin-3 isoform h ( 306) 1238 203.9 3.8e-52 NP_001121168 (OMIM: 109150,607047) ataxin-3 isofor ( 346) 1153 190.7 4e-48 NP_001158253 (OMIM: 109150,607047) ataxin-3 isofor ( 291) 1149 190.1 5.3e-48 NP_001158251 (OMIM: 109150,607047) ataxin-3 isofor ( 240) 851 143.7 4e-34 NP_001121169 (OMIM: 109150,607047) ataxin-3 isofor ( 310) 851 143.8 5e-34 NP_001158250 (OMIM: 109150,607047) ataxin-3 isofor ( 154) 768 130.7 2.1e-30 NP_001158252 (OMIM: 109150,607047) ataxin-3 isofor ( 182) 556 97.8 2e-20 NP_001158248 (OMIM: 109150,607047) ataxin-3 isofor ( 103) 473 84.8 9.4e-17 NP_001158246 (OMIM: 109150,607047) ataxin-3 isofor ( 88) 376 69.7 2.8e-12 >>NP_001129467 (OMIM: 300920) ataxin-3-like protein [Hom (355 aa) initn: 2353 init1: 2353 opt: 2353 Z-score: 1993.5 bits: 377.4 E(85289): 2.7e-104 Smith-Waterman score: 2353; 100.0% identity (100.0% similar) in 355 aa overlap (1-355:1-355) 10 20 30 40 50 60 pF1KE5 MDFIFHEKQEGFLCAQHCLNNLLQGEYFSPVELASIAHQLDEEERMRMAEGGVTSEEYLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MDFIFHEKQEGFLCAQHCLNNLLQGEYFSPVELASIAHQLDEEERMRMAEGGVTSEEYLA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 FLQQPSENMDDTGFFSIQVISNALKFWGLEIIHFNNPEYQKLGIDPINERSFICNYKQHW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 FLQQPSENMDDTGFFSIQVISNALKFWGLEIIHFNNPEYQKLGIDPINERSFICNYKQHW 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 FTIRKFGKHWFNLNSLLAGPELISDTCLANFLARLQQQAYSVFVVKGDLPDCEADQLLQI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 FTIRKFGKHWFNLNSLLAGPELISDTCLANFLARLQQQAYSVFVVKGDLPDCEADQLLQI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 ISVEEMDTPKLNGKKLVKQKEHRVYKTVLEKVSEESDESGTSDQDEEDFQRALELSRQET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ISVEEMDTPKLNGKKLVKQKEHRVYKTVLEKVSEESDESGTSDQDEEDFQRALELSRQET 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 NREDEHLRSTIELSMQGSSGNTSQDLPKTSCVTPASEQPKKIKEDYFEKHQQEQKQQQQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 NREDEHLRSTIELSMQGSSGNTSQDLPKTSCVTPASEQPKKIKEDYFEKHQQEQKQQQQQ 250 260 270 280 290 300 310 320 330 340 350 pF1KE5 SDLPGHSSYLHERPTTSSRAIESDLSDDISEGTVQAAVDTILEIMRKNLKIKGEK ::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SDLPGHSSYLHERPTTSSRAIESDLSDDISEGTVQAAVDTILEIMRKNLKIKGEK 310 320 330 340 350 >>NP_004984 (OMIM: 109150,607047) ataxin-3 reference iso (361 aa) initn: 1431 init1: 1311 opt: 1612 Z-score: 1370.5 bits: 262.1 E(85289): 1.3e-69 Smith-Waterman score: 1612; 69.8% identity (85.9% similar) in 361 aa overlap (1-355:1-361) 10 20 30 40 50 60 pF1KE5 MDFIFHEKQEGFLCAQHCLNNLLQGEYFSPVELASIAHQLDEEERMRMAEGGVTSEEYLA :. :::::::: :::::::::::::::::::::.::::::::::::::::::::::.: . NP_004 MESIFHEKQEGSLCAQHCLNNLLQGEYFSPVELSSIAHQLDEEERMRMAEGGVTSEDYRT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 FLQQPSENMDDTGFFSIQVISNALKFWGLEIIHFNNPEYQKLGIDPINERSFICNYKQHW :::::: ::::.::::::::::::: ::::.: ::.::::.: ::::::::::::::.:: NP_004 FLQQPSGNMDDSGFFSIQVISNALKVWGLELILFNSPEYQRLRIDPINERSFICNYKEHW 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 FTIRKFGKHWFNLNSLLAGPELISDTCLANFLARLQQQAYSVFVVKGDLPDCEADQLLQI ::.::.::.::::::::.:::::::: :: :::.:::..::.:::::::::::::::::. NP_004 FTVRKLGKQWFNLNSLLTGPELISDTYLALFLAQLQQEGYSIFVVKGDLPDCEADQLLQM 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 ISVEEMDTPKLNGKKLVKQKEHRVYKTVLEKVSEESDESGTSDQDEEDFQRALELSRQET : :..: ::: :..:.. ::.::.:: ::.: : .: :: :.::::.:::: ::::: NP_004 IRVQQMHRPKLIGEELAQLKEQRVHKTDLERVLEANDGSGMLDEDEEDLQRALALSRQEI 190 200 210 220 230 240 250 260 270 280 290 pF1KE5 NREDEH--LRSTIELSMQGSSGNTSQDLPKTSCVTPASEQPKKIKEDYFEKHQQ---EQK . :::. :: .:.::::::: : :::. .:: .. .::. .: .: ::::.:: .:. NP_004 DMEDEEADLRRAIQLSMQGSSRNISQDMTQTSGTNLTSEELRKRREAYFEKQQQKQQQQQ 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE5 QQQQQSDLPGHSSYLHERPTTSSRAIESDLSDDISE-GTVQAAVDTILEIMRKNLKIKGE :::::.:: :.::. :::.::: :. :::.: .:: .:::: :: .:..:: .:. NP_004 QQQQQGDLSGQSSHPCERPATSSGALGSDLGDAMSEEDMLQAAVTMSLETVRNDLKTEGK 310 320 330 340 350 360 pF1KE5 K : NP_004 K >>NP_109376 (OMIM: 109150,607047) ataxin-3 isoform h [Ho (306 aa) initn: 1057 init1: 937 opt: 1238 Z-score: 1057.3 bits: 203.9 E(85289): 3.8e-52 Smith-Waterman score: 1238; 65.6% identity (83.9% similar) in 299 aa overlap (63-355:8-306) 40 50 60 70 80 90 pF1KE5 LASIAHQLDEEERMRMAEGGVTSEEYLAFLQQPSENMDDTGFFSIQVISNALKFWGLEII .::: ::::.::::::::::::: ::::.: NP_109 MESIFHEKQPSGNMDDSGFFSIQVISNALKVWGLELI 10 20 30 100 110 120 130 140 150 pF1KE5 HFNNPEYQKLGIDPINERSFICNYKQHWFTIRKFGKHWFNLNSLLAGPELISDTCLANFL ::.::::.: ::::::::::::::.::::.::.::.::::::::.:::::::: :: :: NP_109 LFNSPEYQRLRIDPINERSFICNYKEHWFTVRKLGKQWFNLNSLLTGPELISDTYLALFL 40 50 60 70 80 90 160 170 180 190 200 210 pF1KE5 ARLQQQAYSVFVVKGDLPDCEADQLLQIISVEEMDTPKLNGKKLVKQKEHRVYKTVLEKV :.:::..::.:::::::::::::::::.: :..: ::: :..:.. ::.::.:: ::.: NP_109 AQLQQEGYSIFVVKGDLPDCEADQLLQMIRVQQMHRPKLIGEELAQLKEQRVHKTDLERV 100 110 120 130 140 150 220 230 240 250 260 270 pF1KE5 SEESDESGTSDQDEEDFQRALELSRQETNREDEH--LRSTIELSMQGSSGNTSQDLPKTS : .: :: :.::::.:::: ::::: . :::. :: .:.::::::: : :::. .:: NP_109 LEANDGSGMLDEDEEDLQRALALSRQEIDMEDEEADLRRAIQLSMQGSSRNISQDMTQTS 160 170 180 190 200 210 280 290 300 310 320 pF1KE5 CVTPASEQPKKIKEDYFEKHQQ---EQKQQQQQSDLPGHSSYLHERPTTSSRAIESDLSD .. .::. .: .: ::::.:: .:.:::::.:: :.::. :::.::: :. :::.: NP_109 GTNLTSEELRKRREAYFEKQQQKQQQQQQQQQQGDLSGQSSHPCERPATSSGALGSDLGD 220 230 240 250 260 270 330 340 350 pF1KE5 DISE-GTVQAAVDTILEIMRKNLKIKGEK .:: .:::: :: .:..:: .:.: NP_109 AMSEEDMLQAAVTMSLETVRNDLKTEGKK 280 290 300 >>NP_001121168 (OMIM: 109150,607047) ataxin-3 isoform ad (346 aa) initn: 972 init1: 852 opt: 1153 Z-score: 985.0 bits: 190.7 E(85289): 4e-48 Smith-Waterman score: 1480; 66.2% identity (82.0% similar) in 361 aa overlap (1-355:1-346) 10 20 30 40 50 60 pF1KE5 MDFIFHEKQEGFLCAQHCLNNLLQGEYFSPVELASIAHQLDEEERMRMAEGGVTSEEYLA :. :::::::: :::::::::::::::::::::.::::::::::::::::::::::.: . NP_001 MESIFHEKQEGSLCAQHCLNNLLQGEYFSPVELSSIAHQLDEEERMRMAEGGVTSEDYRT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 FLQQPSENMDDTGFFSIQVISNALKFWGLEIIHFNNPEYQKLGIDPINERSFICNYKQHW ::: ::::::: ::::.: ::.::::.: ::::::::::::::.:: NP_001 FLQ---------------VISNALKVWGLELILFNSPEYQRLRIDPINERSFICNYKEHW 70 80 90 100 130 140 150 160 170 180 pF1KE5 FTIRKFGKHWFNLNSLLAGPELISDTCLANFLARLQQQAYSVFVVKGDLPDCEADQLLQI ::.::.::.::::::::.:::::::: :: :::.:::..::.:::::::::::::::::. NP_001 FTVRKLGKQWFNLNSLLTGPELISDTYLALFLAQLQQEGYSIFVVKGDLPDCEADQLLQM 110 120 130 140 150 160 190 200 210 220 230 240 pF1KE5 ISVEEMDTPKLNGKKLVKQKEHRVYKTVLEKVSEESDESGTSDQDEEDFQRALELSRQET : :..: ::: :..:.. ::.::.:: ::.: : .: :: :.::::.:::: ::::: NP_001 IRVQQMHRPKLIGEELAQLKEQRVHKTDLERVLEANDGSGMLDEDEEDLQRALALSRQEI 170 180 190 200 210 220 250 260 270 280 290 pF1KE5 NREDEH--LRSTIELSMQGSSGNTSQDLPKTSCVTPASEQPKKIKEDYFEKHQQ---EQK . :::. :: .:.::::::: : :::. .:: .. .::. .: .: ::::.:: .:. NP_001 DMEDEEADLRRAIQLSMQGSSRNISQDMTQTSGTNLTSEELRKRREAYFEKQQQKQQQQQ 230 240 250 260 270 280 300 310 320 330 340 350 pF1KE5 QQQQQSDLPGHSSYLHERPTTSSRAIESDLSDDISE-GTVQAAVDTILEIMRKNLKIKGE :::::.:: :.::. :::.::: :. :::.: .:: .:::: :: .:..:: .:. NP_001 QQQQQGDLSGQSSHPCERPATSSGALGSDLGDAMSEEDMLQAAVTMSLETVRNDLKTEGK 290 300 310 320 330 340 pF1KE5 K : NP_001 K >>NP_001158253 (OMIM: 109150,607047) ataxin-3 isoform y (291 aa) initn: 965 init1: 845 opt: 1149 Z-score: 982.8 bits: 190.1 E(85289): 5.3e-48 Smith-Waterman score: 1149; 64.1% identity (82.9% similar) in 287 aa overlap (75-355:5-291) 50 60 70 80 90 100 pF1KE5 RMRMAEGGVTSEEYLAFLQQPSENMDDTGFFSIQVISNALKFWGLEIIHFNNPEYQKLGI : .::::::: ::::.: ::.::::.: : NP_001 MESIFHEKVISNALKVWGLELILFNSPEYQRLRI 10 20 30 110 120 130 140 150 160 pF1KE5 DPINERSFICNYKQHWFTIRKFGKHWFNLNSLLAGPELISDTCLANFLARLQQQAYSVFV :::::::::::::.::::.::.::.::::::::.:::::::: :: :::.:::..::.:: NP_001 DPINERSFICNYKEHWFTVRKLGKQWFNLNSLLTGPELISDTYLALFLAQLQQEGYSIFV 40 50 60 70 80 90 170 180 190 200 210 220 pF1KE5 VKGDLPDCEADQLLQIISVEEMDTPKLNGKKLVKQKEHRVYKTVLEKVSEESDESGTSDQ :::::::::::::::.: :..: ::: :..:.. ::.::.:: ::.: : .: :: :. NP_001 VKGDLPDCEADQLLQMIRVQQMHRPKLIGEELAQLKEQRVHKTDLERVLEANDGSGMLDE 100 110 120 130 140 150 230 240 250 260 270 280 pF1KE5 DEEDFQRALELSRQETNREDEH--LRSTIELSMQGSSGNTSQDLPKTSCVTPASEQPKKI ::::.:::: ::::: . :::. :: .:.::::::: : :::. .:: .. .::. .: NP_001 DEEDLQRALALSRQEIDMEDEEADLRRAIQLSMQGSSRNISQDMTQTSGTNLTSEELRKR 160 170 180 190 200 210 290 300 310 320 330 pF1KE5 KEDYFEKHQQ---EQKQQQQQSDLPGHSSYLHERPTTSSRAIESDLSDDISE-GTVQAAV .: ::::.:: .:.:::::.:: :.::. :::.::: :. :::.: .:: .:::: NP_001 REAYFEKQQQKQQQQQQQQQQGDLSGQSSHPCERPATSSGALGSDLGDAMSEEDMLQAAV 220 230 240 250 260 270 340 350 pF1KE5 DTILEIMRKNLKIKGEK :: .:..:: .:.: NP_001 TMSLETVRNDLKTEGKK 280 290 >>NP_001158251 (OMIM: 109150,607047) ataxin-3 isoform r (240 aa) initn: 670 init1: 550 opt: 851 Z-score: 733.7 bits: 143.7 E(85289): 4e-34 Smith-Waterman score: 851; 60.6% identity (80.9% similar) in 236 aa overlap (126-355:5-240) 100 110 120 130 140 150 pF1KE5 NPEYQKLGIDPINERSFICNYKQHWFTIRKFGKHWFNLNSLLAGPELISDTCLANFLARL : ..::::::::.:::::::: :: :::.: NP_001 MESIFHEKWFNLNSLLTGPELISDTYLALFLAQL 10 20 30 160 170 180 190 200 210 pF1KE5 QQQAYSVFVVKGDLPDCEADQLLQIISVEEMDTPKLNGKKLVKQKEHRVYKTVLEKVSEE ::..::.:::::::::::::::::.: :..: ::: :..:.. ::.::.:: ::.: : NP_001 QQEGYSIFVVKGDLPDCEADQLLQMIRVQQMHRPKLIGEELAQLKEQRVHKTDLERVLEA 40 50 60 70 80 90 220 230 240 250 260 270 pF1KE5 SDESGTSDQDEEDFQRALELSRQETNREDEH--LRSTIELSMQGSSGNTSQDLPKTSCVT .: :: :.::::.:::: ::::: . :::. :: .:.::::::: : :::. .:: .. NP_001 NDGSGMLDEDEEDLQRALALSRQEIDMEDEEADLRRAIQLSMQGSSRNISQDMTQTSGTN 100 110 120 130 140 150 280 290 300 310 320 330 pF1KE5 PASEQPKKIKEDYFEKHQQ---EQKQQQQQSDLPGHSSYLHERPTTSSRAIESDLSDDIS .::. .: .: ::::.:: .:.:::::.:: :.::. :::.::: :. :::.: .: NP_001 LTSEELRKRREAYFEKQQQKQQQQQQQQQQGDLSGQSSHPCERPATSSGALGSDLGDAMS 160 170 180 190 200 210 340 350 pF1KE5 E-GTVQAAVDTILEIMRKNLKIKGEK : .:::: :: .:..:: .:.: NP_001 EEDMLQAAVTMSLETVRNDLKTEGKK 220 230 240 >>NP_001121169 (OMIM: 109150,607047) ataxin-3 isoform e (310 aa) initn: 783 init1: 549 opt: 851 Z-score: 731.9 bits: 143.8 E(85289): 5e-34 Smith-Waterman score: 1200; 58.4% identity (72.6% similar) in 361 aa overlap (1-355:1-310) 10 20 30 40 50 60 pF1KE5 MDFIFHEKQEGFLCAQHCLNNLLQGEYFSPVELASIAHQLDEEERMRMAEGGVTSEEYLA :. :::::::: :::::::::::::::::::::.::::::::::::::::::::::.: . NP_001 MESIFHEKQEGSLCAQHCLNNLLQGEYFSPVELSSIAHQLDEEERMRMAEGGVTSEDYRT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 FLQQPSENMDDTGFFSIQVISNALKFWGLEIIHFNNPEYQKLGIDPINERSFICNYKQHW :::::: ::::.:::::: NP_001 FLQQPSGNMDDSGFFSIQ------------------------------------------ 70 130 140 150 160 170 180 pF1KE5 FTIRKFGKHWFNLNSLLAGPELISDTCLANFLARLQQQAYSVFVVKGDLPDCEADQLLQI ::::::::.:::::::: :: :::.:::..::.:::::::::::::::::. NP_001 ---------WFNLNSLLTGPELISDTYLALFLAQLQQEGYSIFVVKGDLPDCEADQLLQM 80 90 100 110 120 190 200 210 220 230 240 pF1KE5 ISVEEMDTPKLNGKKLVKQKEHRVYKTVLEKVSEESDESGTSDQDEEDFQRALELSRQET : :..: ::: :..:.. ::.::.:: ::.: : .: :: :.::::.:::: ::::: NP_001 IRVQQMHRPKLIGEELAQLKEQRVHKTDLERVLEANDGSGMLDEDEEDLQRALALSRQEI 130 140 150 160 170 180 250 260 270 280 290 pF1KE5 NREDEH--LRSTIELSMQGSSGNTSQDLPKTSCVTPASEQPKKIKEDYFEKHQQ---EQK . :::. :: .:.::::::: : :::. .:: .. .::. .: .: ::::.:: .:. NP_001 DMEDEEADLRRAIQLSMQGSSRNISQDMTQTSGTNLTSEELRKRREAYFEKQQQKQQQQQ 190 200 210 220 230 240 300 310 320 330 340 350 pF1KE5 QQQQQSDLPGHSSYLHERPTTSSRAIESDLSDDISE-GTVQAAVDTILEIMRKNLKIKGE :::::.:: :.::. :::.::: :. :::.: .:: .:::: :: .:..:: .:. NP_001 QQQQQGDLSGQSSHPCERPATSSGALGSDLGDAMSEEDMLQAAVTMSLETVRNDLKTEGK 250 260 270 280 290 300 pF1KE5 K : NP_001 K 310 >>NP_001158250 (OMIM: 109150,607047) ataxin-3 isoform o (154 aa) initn: 762 init1: 762 opt: 768 Z-score: 667.0 bits: 130.7 E(85289): 2.1e-30 Smith-Waterman score: 768; 85.3% identity (94.6% similar) in 129 aa overlap (1-129:1-129) 10 20 30 40 50 60 pF1KE5 MDFIFHEKQEGFLCAQHCLNNLLQGEYFSPVELASIAHQLDEEERMRMAEGGVTSEEYLA :. :::::::: :::::::::::::::::::::.::::::::::::::::::::::.: . NP_001 MESIFHEKQEGSLCAQHCLNNLLQGEYFSPVELSSIAHQLDEEERMRMAEGGVTSEDYRT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 FLQQPSENMDDTGFFSIQVISNALKFWGLEIIHFNNPEYQKLGIDPINERSFICNYKQHW :::::: ::::.::::::::::::: ::::.: ::.::::.: ::::::::::::::.:: NP_001 FLQQPSGNMDDSGFFSIQVISNALKVWGLELILFNSPEYQRLRIDPINERSFICNYKEHW 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 FTIRKFGKHWFNLNSLLAGPELISDTCLANFLARLQQQAYSVFVVKGDLPDCEADQLLQI ::.::.::. NP_001 FTVRKLGKQTAAKAATAAAAAAAGGPIRTEFTSM 130 140 150 >>NP_001158252 (OMIM: 109150,607047) ataxin-3 isoform u (182 aa) initn: 375 init1: 255 opt: 556 Z-score: 487.6 bits: 97.8 E(85289): 2e-20 Smith-Waterman score: 556; 54.4% identity (76.9% similar) in 182 aa overlap (180-355:1-182) 150 160 170 180 190 200 pF1KE5 NFLARLQQQAYSVFVVKGDLPDCEADQLLQIISVEEMDTPKLNGKKLVKQKEHRVYKTVL .: :..: ::: :..:.. ::.::.:: : NP_001 MIRVQQMHRPKLIGEELAQLKEQRVHKTDL 10 20 30 210 220 230 240 250 260 pF1KE5 EKVSEESDESGTSDQDEEDFQRALELSRQETNREDEH--LRSTIELSMQGSSGNTSQDLP :.: : .: :: :.::::.:::: ::::: . :::. :: .:.::::::: : :::. NP_001 ERVLEANDGSGMLDEDEEDLQRALALSRQEIDMEDEEADLRRAIQLSMQGSSRNISQDMT 40 50 60 70 80 90 270 280 290 300 310 320 pF1KE5 KTSCVTPASEQPKKIKEDYFEKHQQ---EQKQQQQQSDLPGHSSYLHERPTTSSRAIESD .:: .. .::. .: .: ::::.:: .:.:::::.:: :.::. :::.::: :. :: NP_001 QTSGTNLTSEELRKRREAYFEKQQQKQQQQQQQQQQGDLSGQSSHPCERPATSSGALGSD 100 110 120 130 140 150 330 340 350 pF1KE5 LSDDISE-GTVQAAVDTILEIMRKNLKIKGEK :.: .:: .:::: :: .:..:: .:.: NP_001 LGDAMSEEDMLQAAVTMSLETVRNDLKTEGKK 160 170 180 >>NP_001158248 (OMIM: 109150,607047) ataxin-3 isoform g (103 aa) initn: 467 init1: 467 opt: 473 Z-score: 421.8 bits: 84.8 E(85289): 9.4e-17 Smith-Waterman score: 473; 84.3% identity (94.0% similar) in 83 aa overlap (1-83:1-83) 10 20 30 40 50 60 pF1KE5 MDFIFHEKQEGFLCAQHCLNNLLQGEYFSPVELASIAHQLDEEERMRMAEGGVTSEEYLA :. :::::::: :::::::::::::::::::::.::::::::::::::::::::::.: . NP_001 MESIFHEKQEGSLCAQHCLNNLLQGEYFSPVELSSIAHQLDEEERMRMAEGGVTSEDYRT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 FLQQPSENMDDTGFFSIQVISNALKFWGLEIIHFNNPEYQKLGIDPINERSFICNYKQHW :::::: ::::.::::::. ..: NP_001 FLQQPSGNMDDSGFFSIQTAAKAATAAAAAAAGGPIRTEFTSM 70 80 90 100 355 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 02:02:05 2016 done: Tue Nov 8 02:02:06 2016 Total Scan time: 5.700 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]