FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB7883, 579 aa 1>>>pF1KB7883 579 - 579 aa - 579 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.2812+/-0.000329; mu= 7.0122+/- 0.021 mean_var=203.7132+/-42.287, 0's: 0 Z-trim(122.6): 32 B-trim: 875 in 1/52 Lambda= 0.089860 statistics sampled from 40974 (41006) to 40974 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.781), E-opt: 0.2 (0.481), width: 16 Scan time: 12.500 The best scores are: opt bits E(85289) NP_006500 (OMIM: 604758) transcription factor RelB ( 579) 4018 533.4 7.7e-151 XP_005259184 (OMIM: 604758) PREDICTED: transcripti ( 576) 3983 528.9 1.8e-149 XP_005259185 (OMIM: 604758) PREDICTED: transcripti ( 507) 2290 309.3 1.9e-83 NP_068810 (OMIM: 164014) transcription factor p65 ( 551) 1142 160.5 1.3e-38 NP_001138610 (OMIM: 164014) transcription factor p ( 548) 1133 159.4 2.9e-38 NP_001230914 (OMIM: 164014) transcription factor p ( 448) 1115 157.0 1.2e-37 NP_001230913 (OMIM: 164014) transcription factor p ( 482) 1094 154.3 8.7e-37 XP_016860116 (OMIM: 164910) PREDICTED: proto-oncog ( 564) 975 138.9 4.3e-32 NP_001278675 (OMIM: 164910) proto-oncogene c-Rel i ( 587) 975 138.9 4.4e-32 NP_002899 (OMIM: 164910) proto-oncogene c-Rel isof ( 619) 975 138.9 4.6e-32 XP_011543508 (OMIM: 164014) PREDICTED: transcripti ( 480) 786 114.3 9.1e-25 XP_011531312 (OMIM: 164910) PREDICTED: proto-oncog ( 489) 672 99.6 2.6e-20 XP_011543509 (OMIM: 164014) PREDICTED: transcripti ( 445) 600 90.2 1.6e-17 NP_001158884 (OMIM: 164011,616576) nuclear factor ( 968) 529 81.3 1.6e-14 NP_001306155 (OMIM: 164011,616576) nuclear factor ( 968) 529 81.3 1.6e-14 NP_003989 (OMIM: 164011,616576) nuclear factor NF- ( 969) 529 81.3 1.6e-14 XP_011530308 (OMIM: 164011,616576) PREDICTED: nucl ( 976) 529 81.3 1.6e-14 XP_011538133 (OMIM: 164012,615577) PREDICTED: nucl ( 755) 477 74.4 1.5e-12 XP_011538132 (OMIM: 164012,615577) PREDICTED: nucl ( 755) 477 74.4 1.5e-12 NP_002493 (OMIM: 164012,615577) nuclear factor NF- ( 899) 477 74.5 1.7e-12 NP_001248332 (OMIM: 164012,615577) nuclear factor ( 899) 477 74.5 1.7e-12 NP_001275653 (OMIM: 164012,615577) nuclear factor ( 899) 477 74.5 1.7e-12 NP_001070962 (OMIM: 164012,615577) nuclear factor ( 900) 477 74.5 1.7e-12 NP_001309863 (OMIM: 164012,615577) nuclear factor ( 900) 477 74.5 1.7e-12 XP_016871767 (OMIM: 164012,615577) PREDICTED: nucl (1081) 477 74.6 1.9e-12 XP_011530310 (OMIM: 164011,616576) PREDICTED: nucl ( 916) 411 66.0 6.3e-10 NP_001309864 (OMIM: 164012,615577) nuclear factor ( 858) 346 57.5 2.1e-07 >>NP_006500 (OMIM: 604758) transcription factor RelB [Ho (579 aa) initn: 4018 init1: 4018 opt: 4018 Z-score: 2829.0 bits: 533.4 E(85289): 7.7e-151 Smith-Waterman score: 4018; 100.0% identity (100.0% similar) in 579 aa overlap (1-579:1-579) 10 20 30 40 50 60 pF1KB7 MLRSGPASGPSVPTGRAMPSRRVARPPAAPELGALGSPDLSSLSLAVSRSTDELEIIDEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 MLRSGPASGPSVPTGRAMPSRRVARPPAAPELGALGSPDLSSLSLAVSRSTDELEIIDEY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB7 IKENGFGLDGGQPGPGEGLPRLVSRGAASLSTVTLGPVAPPATPPPWGCPLGRLVSPAPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 IKENGFGLDGGQPGPGEGLPRLVSRGAASLSTVTLGPVAPPATPPPWGCPLGRLVSPAPG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB7 PGPQPHLVITEQPKQRGMRFRYECEGRSAGSILGESSTEASKTLPAIELRDCGGLREVEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 PGPQPHLVITEQPKQRGMRFRYECEGRSAGSILGESSTEASKTLPAIELRDCGGLREVEV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB7 TACLVWKDWPHRVHPHSLVGKDCTDGICRVRLRPHVSPRHSFNNLGIQCVRKKEIEAAIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 TACLVWKDWPHRVHPHSLVGKDCTDGICRVRLRPHVSPRHSFNNLGIQCVRKKEIEAAIE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB7 RKIQLGIDPYNAGSLKNHQEVDMNVVRICFQASYRDQQGQMRRMDPVLSEPVYDKKSTNT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 RKIQLGIDPYNAGSLKNHQEVDMNVVRICFQASYRDQQGQMRRMDPVLSEPVYDKKSTNT 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB7 SELRICRINKESGPCTGGEELYLLCDKVQKEDISVVFSRASWEGRADFSQADVHRQIAIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 SELRICRINKESGPCTGGEELYLLCDKVQKEDISVVFSRASWEGRADFSQADVHRQIAIV 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB7 FKTPPYEDLEIVEPVTVNVFLQRLTDGVCSEPLPFTYLPRDHDSYGVDKKRKRGMPDVLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 FKTPPYEDLEIVEPVTVNVFLQRLTDGVCSEPLPFTYLPRDHDSYGVDKKRKRGMPDVLG 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB7 ELNSSDPHGIESKRRKKKPAILDHFLPNHGSGPFLPPSALLPDPDFFSGTVSLPGLEPPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 ELNSSDPHGIESKRRKKKPAILDHFLPNHGSGPFLPPSALLPDPDFFSGTVSLPGLEPPG 430 440 450 460 470 480 490 500 510 520 530 540 pF1KB7 GPDLLDDGFAYDPTAPTLFTMLDLLPPAPPHASAVVCSGGAGAVVGETPGPEPLTLDSYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 GPDLLDDGFAYDPTAPTLFTMLDLLPPAPPHASAVVCSGGAGAVVGETPGPEPLTLDSYQ 490 500 510 520 530 540 550 560 570 pF1KB7 APGPGDGGTASLVGSNMFPNHYREAAFGGGLLSPGPEAT ::::::::::::::::::::::::::::::::::::::: NP_006 APGPGDGGTASLVGSNMFPNHYREAAFGGGLLSPGPEAT 550 560 570 >>XP_005259184 (OMIM: 604758) PREDICTED: transcription f (576 aa) initn: 3669 init1: 3669 opt: 3983 Z-score: 2804.5 bits: 528.9 E(85289): 1.8e-149 Smith-Waterman score: 3983; 99.5% identity (99.5% similar) in 579 aa overlap (1-579:1-576) 10 20 30 40 50 60 pF1KB7 MLRSGPASGPSVPTGRAMPSRRVARPPAAPELGALGSPDLSSLSLAVSRSTDELEIIDEY ::::::::::::::::::::::::::::::::::::::::::::::::::: :::::: XP_005 MLRSGPASGPSVPTGRAMPSRRVARPPAAPELGALGSPDLSSLSLAVSRST---EIIDEY 10 20 30 40 50 70 80 90 100 110 120 pF1KB7 IKENGFGLDGGQPGPGEGLPRLVSRGAASLSTVTLGPVAPPATPPPWGCPLGRLVSPAPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 IKENGFGLDGGQPGPGEGLPRLVSRGAASLSTVTLGPVAPPATPPPWGCPLGRLVSPAPG 60 70 80 90 100 110 130 140 150 160 170 180 pF1KB7 PGPQPHLVITEQPKQRGMRFRYECEGRSAGSILGESSTEASKTLPAIELRDCGGLREVEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 PGPQPHLVITEQPKQRGMRFRYECEGRSAGSILGESSTEASKTLPAIELRDCGGLREVEV 120 130 140 150 160 170 190 200 210 220 230 240 pF1KB7 TACLVWKDWPHRVHPHSLVGKDCTDGICRVRLRPHVSPRHSFNNLGIQCVRKKEIEAAIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 TACLVWKDWPHRVHPHSLVGKDCTDGICRVRLRPHVSPRHSFNNLGIQCVRKKEIEAAIE 180 190 200 210 220 230 250 260 270 280 290 300 pF1KB7 RKIQLGIDPYNAGSLKNHQEVDMNVVRICFQASYRDQQGQMRRMDPVLSEPVYDKKSTNT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 RKIQLGIDPYNAGSLKNHQEVDMNVVRICFQASYRDQQGQMRRMDPVLSEPVYDKKSTNT 240 250 260 270 280 290 310 320 330 340 350 360 pF1KB7 SELRICRINKESGPCTGGEELYLLCDKVQKEDISVVFSRASWEGRADFSQADVHRQIAIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 SELRICRINKESGPCTGGEELYLLCDKVQKEDISVVFSRASWEGRADFSQADVHRQIAIV 300 310 320 330 340 350 370 380 390 400 410 420 pF1KB7 FKTPPYEDLEIVEPVTVNVFLQRLTDGVCSEPLPFTYLPRDHDSYGVDKKRKRGMPDVLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 FKTPPYEDLEIVEPVTVNVFLQRLTDGVCSEPLPFTYLPRDHDSYGVDKKRKRGMPDVLG 360 370 380 390 400 410 430 440 450 460 470 480 pF1KB7 ELNSSDPHGIESKRRKKKPAILDHFLPNHGSGPFLPPSALLPDPDFFSGTVSLPGLEPPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 ELNSSDPHGIESKRRKKKPAILDHFLPNHGSGPFLPPSALLPDPDFFSGTVSLPGLEPPG 420 430 440 450 460 470 490 500 510 520 530 540 pF1KB7 GPDLLDDGFAYDPTAPTLFTMLDLLPPAPPHASAVVCSGGAGAVVGETPGPEPLTLDSYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 GPDLLDDGFAYDPTAPTLFTMLDLLPPAPPHASAVVCSGGAGAVVGETPGPEPLTLDSYQ 480 490 500 510 520 530 550 560 570 pF1KB7 APGPGDGGTASLVGSNMFPNHYREAAFGGGLLSPGPEAT ::::::::::::::::::::::::::::::::::::::: XP_005 APGPGDGGTASLVGSNMFPNHYREAAFGGGLLSPGPEAT 540 550 560 570 >>XP_005259185 (OMIM: 604758) PREDICTED: transcription f (507 aa) initn: 2340 init1: 2290 opt: 2290 Z-score: 1619.1 bits: 309.3 E(85289): 1.9e-83 Smith-Waterman score: 3376; 87.6% identity (87.6% similar) in 579 aa overlap (1-579:1-507) 10 20 30 40 50 60 pF1KB7 MLRSGPASGPSVPTGRAMPSRRVARPPAAPELGALGSPDLSSLSLAVSRSTDELEIIDEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MLRSGPASGPSVPTGRAMPSRRVARPPAAPELGALGSPDLSSLSLAVSRSTDELEIIDEY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB7 IKENGFGLDGGQPGPGEGLPRLVSRGAASLSTVTLGPVAPPATPPPWGCPLGRLVSPAPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 IKENGFGLDGGQPGPGEGLPRLVSRGAASLSTVTLGPVAPPATPPPWGCPLGRLVSPAPG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB7 PGPQPHLVITEQPKQRGMRFRYECEGRSAGSILGESSTEASKTLPAIELRDCGGLREVEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 PGPQPHLVITEQPKQRGMRFRYECEGRSAGSILGESSTEASKTLPAIELRDCGGLREVEV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB7 TACLVWKDWPHRVHPHSLVGKDCTDGICRVRLRPHVSPRHSFNNLGIQCVRKKEIEAAIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 TACLVWKDWPHRVHPHSLVGKDCTDGICRVRLRPHVSPRHSFNNLGIQCVRKKEIEAAIE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB7 RKIQLGIDPYNAGSLKNHQEVDMNVVRICFQASYRDQQGQMRRMDPVLSEPVYDKKSTNT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 RKIQLGIDPYNAGSLKNHQEVDMNVVRICFQASYRDQQGQMRRMDPVLSEPVYDKKSTNT 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB7 SELRICRINKESGPCTGGEELYLLCDKVQKEDISVVFSRASWEGRADFSQADVHRQIAIV :::::::::::::::::::::::::::::: XP_005 SELRICRINKESGPCTGGEELYLLCDKVQK------------------------------ 310 320 330 370 380 390 400 410 420 pF1KB7 FKTPPYEDLEIVEPVTVNVFLQRLTDGVCSEPLPFTYLPRDHDSYGVDKKRKRGMPDVLG :::::::::::::::::: XP_005 ------------------------------------------DSYGVDKKRKRGMPDVLG 340 430 440 450 460 470 480 pF1KB7 ELNSSDPHGIESKRRKKKPAILDHFLPNHGSGPFLPPSALLPDPDFFSGTVSLPGLEPPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 ELNSSDPHGIESKRRKKKPAILDHFLPNHGSGPFLPPSALLPDPDFFSGTVSLPGLEPPG 350 360 370 380 390 400 490 500 510 520 530 540 pF1KB7 GPDLLDDGFAYDPTAPTLFTMLDLLPPAPPHASAVVCSGGAGAVVGETPGPEPLTLDSYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 GPDLLDDGFAYDPTAPTLFTMLDLLPPAPPHASAVVCSGGAGAVVGETPGPEPLTLDSYQ 410 420 430 440 450 460 550 560 570 pF1KB7 APGPGDGGTASLVGSNMFPNHYREAAFGGGLLSPGPEAT ::::::::::::::::::::::::::::::::::::::: XP_005 APGPGDGGTASLVGSNMFPNHYREAAFGGGLLSPGPEAT 470 480 490 500 >>NP_068810 (OMIM: 164014) transcription factor p65 isof (551 aa) initn: 1080 init1: 736 opt: 1142 Z-score: 814.3 bits: 160.5 E(85289): 1.3e-38 Smith-Waterman score: 1142; 42.4% identity (68.4% similar) in 446 aa overlap (114-552:7-436) 90 100 110 120 130 140 pF1KB7 SRGAASLSTVTLGPVAPPATPPPWGCPLGRLVSPA-PGPGPQPHLVITEQPKQRGMRFRY :. :: :. . :.. : :::::::::::: NP_068 MDELFPLIFPAEPAQASGPYVEIIEQPKQRGMRFRY 10 20 30 150 160 170 180 190 200 pF1KB7 ECEGRSAGSILGESSTEASKTLPAIELRDCGGLREVEVTACLVWKDWPHRVHPHSLVGKD .::::::::: :: ::...:: :.:.. : :... :: :: ::: ::: ::::: NP_068 KCEGRSAGSIPGERSTDTTKTHPTIKINGYTGPGTVRIS--LVTKDPPHRPHPHELVGKD 40 50 60 70 80 90 210 220 230 240 250 260 pF1KB7 CTDGICRVRLRPHVSPRHSFNNLGIQCVRKKEIEAAIERKIQLGIDPYNAGSLKNHQEVD : ::. ...: : :::.:::::::.:...: :: ..:: . .:... ... . : NP_068 CRDGFYEAELCPDRCI-HSFQNLGIQCVKKRDLEQAISQRIQTNNNPFQVPIEEQRGDYD 100 110 120 130 140 150 270 280 290 300 310 320 pF1KB7 MNVVRICFQASYRDQQGQMRRMDPVLSEPVYDKKSTNTSELRICRINKESGPCTGGEELY .:.::.:::.. :: .:. :. ::::.:..:... ::.::.:::.:..:: : ::.:.. NP_068 LNAVRLCFQVTVRDPSGRPLRLPPVLSHPIFDNRAPNTAELKICRVNRNSGSCLGGDEIF 160 170 180 190 200 210 330 340 350 360 370 380 pF1KB7 LLCDKVQKEDISVVFSRASWEGRADFSQADVHRQIAIVFKTPPYEDLEIVEPVTVNVFLQ ::::::::::: : :. .::.:..:::::::::.::::.:::: : . :: :.. :. NP_068 LLCDKVQKEDIEVYFTGPGWEARGSFSQADVHRQVAIVFRTPPYADPSLQAPVRVSMQLR 220 230 240 250 260 270 390 400 410 420 430 440 pF1KB7 RLTDGVCSEPLPFTYLPRDHDSYGVDKKRKRGMPDVLGELNSSDPHGIESKRRKKKPAIL : .: :::. : ::: : . ...:::: . . ...: : . : : NP_068 RPSDRELSEPMEFQYLPDTDDRHRIEEKRKRTYETFKSIMKKSPFSGPTDPR----PPPR 280 290 300 310 320 450 460 470 480 490 pF1KB7 DHFLPNHGSGPFLPPSALLPDPDFFSGTVS------LPGLEPPGGPDLLDDGFAYDPTAP .:...:. :. :.: :....: .: . :.: .... : :. : NP_068 RIAVPSRSSASVPKPA---PQPYPFTSSLSTINYDEFPTMVFPSGQ--ISQASALAPAPP 330 340 350 360 370 380 500 510 520 530 540 550 pF1KB7 TLFTMLDLLPPAPPHASAVVCSGGAGAVVGETPGPEPLTLDSYQAPGPGDGGTASLVGSN .. . ::: .::.. . . :. .::: : .. . :: : ..: ..: NP_068 QVLPQAPAPAPAPAMVSALAQAPAPVPVL--APGP-PQAV-APPAPKPTQAGEGTLSEAL 390 400 410 420 430 440 560 570 pF1KB7 MFPNHYREAAFGGGLLSPGPEAT NP_068 LQLQFDDEDLGALLGNSTDPAVFTDLASVDNSEFQQLLNQGIPVAPHTTEPMLMEYPEAI 450 460 470 480 490 500 >>NP_001138610 (OMIM: 164014) transcription factor p65 i (548 aa) initn: 975 init1: 614 opt: 1133 Z-score: 808.0 bits: 159.4 E(85289): 2.9e-38 Smith-Waterman score: 1133; 42.4% identity (68.2% similar) in 446 aa overlap (114-552:7-433) 90 100 110 120 130 140 pF1KB7 SRGAASLSTVTLGPVAPPATPPPWGCPLGRLVSPA-PGPGPQPHLVITEQPKQRGMRFRY :. :: :. . :.. : :::::::::::: NP_001 MDELFPLIFPAEPAQASGPYVEIIEQPKQRGMRFRY 10 20 30 150 160 170 180 190 200 pF1KB7 ECEGRSAGSILGESSTEASKTLPAIELRDCGGLREVEVTACLVWKDWPHRVHPHSLVGKD .::::::::: :: ::...:: :.:.. : :... :: :: ::: ::: ::::: NP_001 KCEGRSAGSIPGERSTDTTKTHPTIKINGYTGPGTVRIS--LVTKDPPHRPHPHELVGKD 40 50 60 70 80 90 210 220 230 240 250 260 pF1KB7 CTDGICRVRLRPHVSPRHSFNNLGIQCVRKKEIEAAIERKIQLGIDPYNAGSLKNHQEVD : ::. ...: : :::.:::::::.:...: :: ..:: . .:.. ... . : NP_001 CRDGFYEAELCPDRCI-HSFQNLGIQCVKKRDLEQAISQRIQTNNNPFQE---EQRGDYD 100 110 120 130 140 150 270 280 290 300 310 320 pF1KB7 MNVVRICFQASYRDQQGQMRRMDPVLSEPVYDKKSTNTSELRICRINKESGPCTGGEELY .:.::.:::.. :: .:. :. ::::.:..:... ::.::.:::.:..:: : ::.:.. NP_001 LNAVRLCFQVTVRDPSGRPLRLPPVLSHPIFDNRAPNTAELKICRVNRNSGSCLGGDEIF 160 170 180 190 200 210 330 340 350 360 370 380 pF1KB7 LLCDKVQKEDISVVFSRASWEGRADFSQADVHRQIAIVFKTPPYEDLEIVEPVTVNVFLQ ::::::::::: : :. .::.:..:::::::::.::::.:::: : . :: :.. :. NP_001 LLCDKVQKEDIEVYFTGPGWEARGSFSQADVHRQVAIVFRTPPYADPSLQAPVRVSMQLR 220 230 240 250 260 270 390 400 410 420 430 440 pF1KB7 RLTDGVCSEPLPFTYLPRDHDSYGVDKKRKRGMPDVLGELNSSDPHGIESKRRKKKPAIL : .: :::. : ::: : . ...:::: . . ...: : . : : NP_001 RPSDRELSEPMEFQYLPDTDDRHRIEEKRKRTYETFKSIMKKSPFSGPTDPR----PPPR 280 290 300 310 320 450 460 470 480 490 pF1KB7 DHFLPNHGSGPFLPPSALLPDPDFFSGTVS------LPGLEPPGGPDLLDDGFAYDPTAP .:...:. :. :.: :....: .: . :.: .... : :. : NP_001 RIAVPSRSSASVPKPA---PQPYPFTSSLSTINYDEFPTMVFPSGQ--ISQASALAPAPP 330 340 350 360 370 380 500 510 520 530 540 550 pF1KB7 TLFTMLDLLPPAPPHASAVVCSGGAGAVVGETPGPEPLTLDSYQAPGPGDGGTASLVGSN .. . ::: .::.. . . :. .::: : .. . :: : ..: ..: NP_001 QVLPQAPAPAPAPAMVSALAQAPAPVPVL--APGP-PQAV-APPAPKPTQAGEGTLSEAL 390 400 410 420 430 560 570 pF1KB7 MFPNHYREAAFGGGLLSPGPEAT NP_001 LQLQFDDEDLGALLGNSTDPAVFTDLASVDNSEFQQLLNQGIPVAPHTTEPMLMEYPEAI 440 450 460 470 480 490 >>NP_001230914 (OMIM: 164014) transcription factor p65 i (448 aa) initn: 1046 init1: 736 opt: 1115 Z-score: 796.6 bits: 157.0 E(85289): 1.2e-37 Smith-Waterman score: 1138; 43.3% identity (66.6% similar) in 434 aa overlap (114-535:7-432) 90 100 110 120 130 140 pF1KB7 SRGAASLSTVTLGPVAPPATPPPWGCPLGRLVSPA-PGPGPQPHLVITEQPKQRGMRFRY :. :: :. . :.. : :::::::::::: NP_001 MDELFPLIFPAEPAQASGPYVEIIEQPKQRGMRFRY 10 20 30 150 160 170 180 190 200 pF1KB7 ECEGRSAGSILGESSTEASKTLPAIELRDCGGLREVEVTACLVWKDWPHRVHPHSLVGKD .::::::::: :: ::...:: :.:.. : :... :: :: ::: ::: ::::: NP_001 KCEGRSAGSIPGERSTDTTKTHPTIKINGYTGPGTVRIS--LVTKDPPHRPHPHELVGKD 40 50 60 70 80 90 210 220 230 240 250 260 pF1KB7 CTDGICRVRLRPHVSPRHSFNNLGIQCVRKKEIEAAIERKIQLGIDPYNAGSLKNHQEVD : ::. ...: : :::.:::::::.:...: :: ..:: . .:... ... . : NP_001 CRDGFYEAELCPDRCI-HSFQNLGIQCVKKRDLEQAISQRIQTNNNPFQVPIEEQRGDYD 100 110 120 130 140 150 270 280 290 300 310 320 pF1KB7 MNVVRICFQASYRDQQGQMRRMDPVLSEPVYDKKSTNTSELRICRINKESGPCTGGEELY .:.::.:::.. :: .:. :. ::::.:..:... ::.::.:::.:..:: : ::.:.. NP_001 LNAVRLCFQVTVRDPSGRPLRLPPVLSHPIFDNRAPNTAELKICRVNRNSGSCLGGDEIF 160 170 180 190 200 210 330 340 350 360 370 380 pF1KB7 LLCDKVQKEDISVVFSRASWEGRADFSQADVHRQIAIVFKTPPYEDLEIVEPVTVNVFLQ ::::::::::: : :. .::.:..:::::::::.::::.:::: : . :: :.. :. NP_001 LLCDKVQKEDIEVYFTGPGWEARGSFSQADVHRQVAIVFRTPPYADPSLQAPVRVSMQLR 220 230 240 250 260 270 390 400 410 420 430 pF1KB7 RLTDGVCSEPLPFTYLPRDHDSYGVDKKRKRGMPDVLGELNSSDPHGIESKR----RKKK : .: :::. : ::: : . ...:::: . . ...: : . : : NP_001 RPSDRELSEPMEFQYLPDTDDRHRIEEKRKRTYETFKSIMKKSPFSGPTDPRPPPRRIAV 280 290 300 310 320 330 440 450 460 470 480 490 pF1KB7 PAILDHFLPNHGSGPFLPPSAL-------LPDPDFFSGTVSLPGLEPPGGPDLLDDGFAY :. . .:. . :. :.: .: : :: .: . :. :..: .. : NP_001 PSRSSASVPKPAPQPYPFTSSLSTINYDEFPTMVFPSGQISQASALAPAPPQVLPQAPAP 340 350 360 370 380 390 500 510 520 530 540 550 pF1KB7 DPTAPTLFTMLDLLPPAPPHASAVVCSGGAGAVVGETPGPEPLTLDSYQAPGPGDGGTAS : ::.. . : :: : : :. : : : : .. NP_001 AP-APAMVSALAQRPPDPAPAPL----GAPGLPNGLLSGDEDFSSIADMDFSALLSQISS 400 410 420 430 440 560 570 pF1KB7 LVGSNMFPNHYREAAFGGGLLSPGPEAT >>NP_001230913 (OMIM: 164014) transcription factor p65 i (482 aa) initn: 1087 init1: 736 opt: 1094 Z-score: 781.4 bits: 154.3 E(85289): 8.7e-37 Smith-Waterman score: 1094; 42.0% identity (64.9% similar) in 459 aa overlap (114-560:7-456) 90 100 110 120 130 140 pF1KB7 SRGAASLSTVTLGPVAPPATPPPWGCPLGRLVSPA-PGPGPQPHLVITEQPKQRGMRFRY :. :: :. . :.. : :::::::::::: NP_001 MDELFPLIFPAEPAQASGPYVEIIEQPKQRGMRFRY 10 20 30 150 160 170 180 190 200 pF1KB7 ECEGRSAGSILGESSTEASKTLPAIELRDCGGLREVEVTACLVWKDWPHRVHPHSLVGKD .::::::::: :: ::...:: :.:.. : :... :: :: ::: ::: ::::: NP_001 KCEGRSAGSIPGERSTDTTKTHPTIKINGYTGPGTVRIS--LVTKDPPHRPHPHELVGKD 40 50 60 70 80 90 210 220 230 240 250 260 pF1KB7 CTDGICRVRLRPHVSPRHSFNNLGIQCVRKKEIEAAIERKIQLGIDPYNAGSLKNHQEVD : ::. ...: : :::.:::::::.:...: :: ..:: . .:... ... . : NP_001 CRDGFYEAELCPDRCI-HSFQNLGIQCVKKRDLEQAISQRIQTNNNPFQVPIEEQRGDYD 100 110 120 130 140 150 270 280 290 300 310 320 pF1KB7 MNVVRICFQASYRDQQGQMRRMDPVLSEPVYDKKSTNTSELRICRINKESGPCTGGEELY .:.::.:::.. :: .:. :. ::::.:..:... ::.::.:::.:..:: : ::.:.. NP_001 LNAVRLCFQVTVRDPSGRPLRLPPVLSHPIFDNRAPNTAELKICRVNRNSGSCLGGDEIF 160 170 180 190 200 210 330 340 350 360 370 380 pF1KB7 LLCDKVQKEDISVVFSRASWEGRADFSQADVHRQIAIVFKTPPYEDLEIVEPVTVNVFLQ ::::::::::: : :. .::.:..:::::::::.::::.:::: : . :: :.. :. NP_001 LLCDKVQKEDIEVYFTGPGWEARGSFSQADVHRQVAIVFRTPPYADPSLQAPVRVSMQLR 220 230 240 250 260 270 390 400 410 420 430 pF1KB7 RLTDGVCSEPLPFTYLPRDHDSYGVDKKRKRGMPDVLGELNSSDPHGIESKR----RKKK : .: :::. : ::: : . ...:::: . . ...: : . : : NP_001 RPSDRELSEPMEFQYLPDTDDRHRIEEKRKRTYETFKSIMKKSPFSGPTDPRPPPRRIAV 280 290 300 310 320 330 440 450 460 470 480 490 pF1KB7 PAILDHFLPNHGSGPFLPPSALLPDPDFFS---GTVSLPGLEPPGGPDLLDDGFAYDPTA :. . .:. . :: : .. : : . ::.: :. . : .. . : NP_001 PSRSSASVPKPAPGP--PQAVAPPAPKPTQAGEGTLSEALLQLQFDDEDLG-ALLGNSTD 340 350 360 370 380 390 500 510 520 530 540 550 pF1KB7 PTLFTMLDLLPPAPPHASAVVCSGGAGAVVGETPG----PEPLTLDSYQAPGPGDGGTAS :..:: :: . . .. .: : : :: .: : : : . : NP_001 PAVFT--DLASVDNSEFQQLLNQGIPVAPHTTEPMLMEYPEAITRLVTGAQRPPDPAPAP 400 410 420 430 440 560 570 pF1KB7 LVGSNMFPNHYREAAFGGGLLSPGPEAT : :. .:: NP_001 L-GAPGLPNGLLSGDEDFSSIADMDFSALLSQISS 450 460 470 480 >>XP_016860116 (OMIM: 164910) PREDICTED: proto-oncogene (564 aa) initn: 557 init1: 457 opt: 975 Z-score: 697.2 bits: 138.9 E(85289): 4.3e-32 Smith-Waterman score: 982; 45.6% identity (70.5% similar) in 353 aa overlap (125-459:8-356) 100 110 120 130 140 150 pF1KB7 LGPVAPPATPPPWGCPLGRLVSPAPGPGPQPHLVITEQPKQRGMRFRYECEGRSAGSILG :.. : :::.::::::::.::::::::: : XP_016 MASGAYNPYIEIIEQPRQRGMRFRYKCEGRSAGSIPG 10 20 30 160 170 180 190 200 210 pF1KB7 ESSTEASKTLPAIELRDCGGLREVEVTACLVWKDWPHRVHPHSLVGKDCTDGICRVRLRP : ::. ..: :.:.. . : .:..: :: :. :.. :::.:::::: :: .... XP_016 EHSTDNNRTYPSIQIMNYYGKGKVRIT--LVTKNDPYKPHPHDLVGKDCRDGYYEAEFGQ 40 50 60 70 80 90 220 230 240 250 260 270 pF1KB7 HVSPRHSFNNLGIQCVRKKEIEAAIERKIQLGIDPYNAG--SLKNHQEVDMNVVRICFQA . : :.::::.::.:::.. :: .:. ::.:.:. .:.. .. :.::::.:::. XP_016 ERRPLF-FQNLGIRCVKKKEVKEAIITRIKAGINPFNVPEKQLNDIEDCDLNVVRLCFQV 100 110 120 130 140 150 280 290 300 310 320 330 pF1KB7 SYRDQQGQMRR-MDPVLSEPVYDKKSTNTSELRICRINKESGPCTGGEELYLLCDKVQKE :..:.. . ::.:.:.::... ::.::::::.::. : ::.:..::::::::. XP_016 FLPDEHGNLTTALPPVVSNPIYDNRAPNTAELRICRVNKNCGSVRGGDEIFLLCDKVQKD 160 170 180 190 200 210 340 350 360 370 380 390 pF1KB7 DISVVFSRASWEGRADFSQADVHRQIAIVFKTPPYEDLEIVEPVTVNVFLQRLTDGVCSE :: : : .::... :::::::::.::::::::: :.:::::.. :.: .: :: XP_016 DIEVRFVLNDWEAKGIFSQADVHRQVAIVFKTPPYCK-AITEPVTVKMQLRRPSDQEVSE 220 230 240 250 260 270 400 410 420 430 pF1KB7 PLPFTYLPRDHDSYGVDKKRKRGM-------PDVLGELNSSD------PHGIESKRRK-- . : ::: ..:.:: :... : .: : : : :. :. .. XP_016 SMDFRYLPDEKDTYGNKAKKQKTTLLFQKLCQDHEPNLFSHDAVVREMPTGVSSQAESYY 280 290 300 310 320 330 440 450 460 470 480 490 pF1KB7 KKPAILDHFLPNHGSGPFLPPSALLPDPDFFSGTVSLPGLEPPGGPDLLDDGFAYDPTAP .:. .. : .:.: :: :. XP_016 PSPGPISSGLSHHASMAPLPSSSWSSVAHPTPRSGNTNPLSSFSTRTLPSNSQGIPPFLR 340 350 360 370 380 390 >>NP_001278675 (OMIM: 164910) proto-oncogene c-Rel isofo (587 aa) initn: 557 init1: 457 opt: 975 Z-score: 696.9 bits: 138.9 E(85289): 4.4e-32 Smith-Waterman score: 975; 50.3% identity (76.4% similar) in 292 aa overlap (125-413:8-295) 100 110 120 130 140 150 pF1KB7 LGPVAPPATPPPWGCPLGRLVSPAPGPGPQPHLVITEQPKQRGMRFRYECEGRSAGSILG :.. : :::.::::::::.::::::::: : NP_001 MASGAYNPYIEIIEQPRQRGMRFRYKCEGRSAGSIPG 10 20 30 160 170 180 190 200 210 pF1KB7 ESSTEASKTLPAIELRDCGGLREVEVTACLVWKDWPHRVHPHSLVGKDCTDGICRVRLRP : ::. ..: :.:.. . : .:..: :: :. :.. :::.:::::: :: .... NP_001 EHSTDNNRTYPSIQIMNYYGKGKVRIT--LVTKNDPYKPHPHDLVGKDCRDGYYEAEFGQ 40 50 60 70 80 90 220 230 240 250 260 270 pF1KB7 HVSPRHSFNNLGIQCVRKKEIEAAIERKIQLGIDPYNAG--SLKNHQEVDMNVVRICFQA . : :.::::.::.:::.. :: .:. ::.:.:. .:.. .. :.::::.:::. NP_001 ERRPLF-FQNLGIRCVKKKEVKEAIITRIKAGINPFNVPEKQLNDIEDCDLNVVRLCFQV 100 110 120 130 140 150 280 290 300 310 320 330 pF1KB7 SYRDQQGQMRR-MDPVLSEPVYDKKSTNTSELRICRINKESGPCTGGEELYLLCDKVQKE :..:.. . ::.:.:.::... ::.::::::.::. : ::.:..::::::::. NP_001 FLPDEHGNLTTALPPVVSNPIYDNRAPNTAELRICRVNKNCGSVRGGDEIFLLCDKVQKD 160 170 180 190 200 210 340 350 360 370 380 390 pF1KB7 DISVVFSRASWEGRADFSQADVHRQIAIVFKTPPYEDLEIVEPVTVNVFLQRLTDGVCSE :: : : .::... :::::::::.::::::::: :.:::::.. :.: .: :: NP_001 DIEVRFVLNDWEAKGIFSQADVHRQVAIVFKTPPYCK-AITEPVTVKMQLRRPSDQEVSE 220 230 240 250 260 270 400 410 420 430 440 450 pF1KB7 PLPFTYLPRDHDSYGVDKKRKRGMPDVLGELNSSDPHGIESKRRKKKPAILDHFLPNHGS . : ::: ..:.:: :... NP_001 SMDFRYLPDEKDTYGNKAKKQKTTLLFQKLCQDHVNFPERPRPGLLGSIGEGRYFKKEPN 280 290 300 310 320 330 >>NP_002899 (OMIM: 164910) proto-oncogene c-Rel isoform (619 aa) initn: 557 init1: 457 opt: 975 Z-score: 696.6 bits: 138.9 E(85289): 4.6e-32 Smith-Waterman score: 988; 40.9% identity (66.4% similar) in 440 aa overlap (125-552:8-428) 100 110 120 130 140 150 pF1KB7 LGPVAPPATPPPWGCPLGRLVSPAPGPGPQPHLVITEQPKQRGMRFRYECEGRSAGSILG :.. : :::.::::::::.::::::::: : NP_002 MASGAYNPYIEIIEQPRQRGMRFRYKCEGRSAGSIPG 10 20 30 160 170 180 190 200 210 pF1KB7 ESSTEASKTLPAIELRDCGGLREVEVTACLVWKDWPHRVHPHSLVGKDCTDGICRVRLRP : ::. ..: :.:.. . : .:..: :: :. :.. :::.:::::: :: .... NP_002 EHSTDNNRTYPSIQIMNYYGKGKVRIT--LVTKNDPYKPHPHDLVGKDCRDGYYEAEFGQ 40 50 60 70 80 90 220 230 240 250 260 270 pF1KB7 HVSPRHSFNNLGIQCVRKKEIEAAIERKIQLGIDPYNAG--SLKNHQEVDMNVVRICFQA . : :.::::.::.:::.. :: .:. ::.:.:. .:.. .. :.::::.:::. NP_002 ERRPLF-FQNLGIRCVKKKEVKEAIITRIKAGINPFNVPEKQLNDIEDCDLNVVRLCFQV 100 110 120 130 140 150 280 290 300 310 320 330 pF1KB7 SYRDQQGQMRR-MDPVLSEPVYDKKSTNTSELRICRINKESGPCTGGEELYLLCDKVQKE :..:.. . ::.:.:.::... ::.::::::.::. : ::.:..::::::::. NP_002 FLPDEHGNLTTALPPVVSNPIYDNRAPNTAELRICRVNKNCGSVRGGDEIFLLCDKVQKD 160 170 180 190 200 210 340 350 360 370 380 390 pF1KB7 DISVVFSRASWEGRADFSQADVHRQIAIVFKTPPYEDLEIVEPVTVNVFLQRLTDGVCSE :: : : .::... :::::::::.::::::::: :.:::::.. :.: .: :: NP_002 DIEVRFVLNDWEAKGIFSQADVHRQVAIVFKTPPYCK-AITEPVTVKMQLRRPSDQEVSE 220 230 240 250 260 270 400 410 420 430 440 450 pF1KB7 PLPFTYLPRDHDSYGVDKKRKRGMPDVLGELNSSDPHGIESKRRKKKPAILDHFLPNHGS . : ::: ..:.:: .: .:. .. .: . : .:. :. :. : . :. NP_002 SMDFRYLPDEKDTYG-NKAKKQKTTLLFQKL--CQDH-VETGFRHVDQDGLE--LLTSGD 280 290 300 310 320 460 470 480 490 500 510 pF1KB7 GPFLPPSALLPDPDFFSG-TVSLPGLEPPGGPDLLDDGFAYDPTAPTLFTMLDLLPPAPP : : .. .: ::..: :: . .: : :.::. .. : NP_002 PPTLASQS--------AGITVNFPERPRPGLLGSIGEG-RYFKKEPNLFSHDAVVREMPT 330 340 350 360 370 520 530 540 550 560 pF1KB7 HASAVVCS-----GGAGAVVGETPGPEPLTLDSYQA---PGPGDGGTASLVGSNMFPNHY .:. . : : .. ... . :: .:... : : .:.: : NP_002 GVSSQAESYYPSPGPISSGLSHHASMAPLPSSSWSSVAHPTPRSGNTNPLSSFSTRTLPS 380 390 400 410 420 430 570 pF1KB7 REAAFGGGLLSPGPEAT NP_002 NSQGIPPFLRIPVGNDLNASNACIYNNADDIVGMEASSMPSADLYGISDPNMLSNCSVNM 440 450 460 470 480 490 579 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 10:35:21 2016 done: Sun Nov 6 10:35:23 2016 Total Scan time: 12.500 Total Display time: 0.090 Function used was FASTA [36.3.4 Apr, 2011]