FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5775, 624 aa 1>>>pF1KE5775 624 - 624 aa - 624 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.0455+/-0.000968; mu= 14.9200+/- 0.058 mean_var=64.1169+/-12.817, 0's: 0 Z-trim(104.5): 24 B-trim: 50 in 1/50 Lambda= 0.160173 statistics sampled from 7915 (7917) to 7915 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.613), E-opt: 0.2 (0.243), width: 16 Scan time: 2.660 The best scores are: opt bits E(32554) CCDS44729.1 FDXACB1 gene_id:91893|Hs108|chr11 ( 624) 4259 993.2 0 CCDS4494.1 FARS2 gene_id:10667|Hs108|chr6 ( 451) 288 75.5 1.7e-13 >>CCDS44729.1 FDXACB1 gene_id:91893|Hs108|chr11 (624 aa) initn: 4259 init1: 4259 opt: 4259 Z-score: 5312.7 bits: 993.2 E(32554): 0 Smith-Waterman score: 4259; 99.8% identity (99.8% similar) in 624 aa overlap (1-624:1-624) 10 20 30 40 50 60 pF1KE5 MAPRRLLLVGEGNFSFAAALSETLDQSTQLTATCLQRPAELARDPLAWENLQCLRERGID :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 MAPRRLLLVGEGNFSFAAALSETLDQSTQLTATCLQRPAELARDPLAWENLQCLRERGID 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 VRFGVDCTQLADVFELHEREFDQIYFNFPHCGRKAGVAKNRELLAKFFQSCADVLAEEGE :::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::: CCDS44 VRFGVDCTQLADVFELHEREFDQIYFIFPHCGRKAGVAKNRELLAKFFQSCADVLAEEGE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 VHVALCRGQGGTPADKPQREWHNSWQVVAMAALGGLILSDVYPFSCKAVAGYKCTGYRSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 VHVALCRGQGGTPADKPQREWHNSWQVVAMAALGGLILSDVYPFSCKAVAGYKCTGYRSQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 DKSFHVEGALNHIFTRSLPFEGSQPRIFRIKLGNQWFSFPEPEALVGKLNRGFLEAPSCH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 DKSFHVEGALNHIFTRSLPFEGSQPRIFRIKLGNQWFSFPEPEALVGKLNRGFLEAPSCH 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 PIKTINEKLIAELGKVFPLKRLKCSYPLLPQEGTSVLPFWNCDFLSAAFWISLHEDNSNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 PIKTINEKLIAELGKVFPLKRLKCSYPLLPQEGTSVLPFWNCDFLSAAFWISLHEDNSNS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 ESLTGGTSQDVEDFLVSFSELSLLKNPGRDGKEEACEGTCGQAKICLRPSLLVHVQDVIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 ESLTGGTSQDVEDFLVSFSELSLLKNPGRDGKEEACEGTCGQAKICLRPSLLVHVQDVIE 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 VPDFLSGSLHILSGPVFQKCHILPFTMPAFHETLFILGVNQNLKDGCLQSLLDHLKGILD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 VPDFLSGSLHILSGPVFQKCHILPFTMPAFHETLFILGVNQNLKDGCLQSLLDHLKGILD 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 SLLTQTLPESSKLSSLVKFVLQSNGKDYMIRVKTHNFSPDCTEDLIIGSVITSATSVIHK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 SLLTQTLPESSKLSSLVKFVLQSNGKDYMIRVKTHNFSPDCTEDLIIGSVITSATSVIHK 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 DQCFVFVSMNLDLLAMLVWCISDWRMLWTFDNRFLKNFVPGKIEPFKSHSLYPPCYVHDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 DQCFVFVSMNLDLLAMLVWCISDWRMLWTFDNRFLKNFVPGKIEPFKSHSLYPPCYVHDV 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE5 SFWIDQKKGFDELEFHTVARAVSQDTIISIQFLSRFQHPKTQQVSLCYRLTYQTCDKALT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 SFWIDQKKGFDELEFHTVARAVSQDTIISIQFLSRFQHPKTQQVSLCYRLTYQTCDKALT 550 560 570 580 590 600 610 620 pF1KE5 QQQVASMQSQFRKEIQQHLYVIPR :::::::::::::::::::::::: CCDS44 QQQVASMQSQFRKEIQQHLYVIPR 610 620 >>CCDS4494.1 FARS2 gene_id:10667|Hs108|chr6 (451 aa) initn: 183 init1: 105 opt: 288 Z-score: 355.9 bits: 75.5 E(32554): 1.7e-13 Smith-Waterman score: 292; 26.4% identity (60.3% similar) in 292 aa overlap (363-624:162-450) 340 350 360 370 380 390 pF1KE5 EEACEGTCGQAKICLRPSLLVHVQDVIEVPDFLSGSLH--ILSGPVFQKCHILPFTMPAF :.: ..: .. : :... .: .: : CCDS44 PADHPSRKKGDNYYLNRTHMLRAHTSAHQWDLLHAGLDAFLVVGDVYRRDQIDSQHYPIF 140 150 160 170 180 190 400 410 420 430 pF1KE5 H--ETLFILGVNQ---NLKDGCLQSLLDHLKGILDSLLTQTLPESSKL------SSLVKF : :.. ... .. ..::: .:... . . :.:. :. :: ..:... CCDS44 HQLEAVRLFSKHELFAGIKDGESLQLFEQSSRSAHKQETHTM-EAVKLVEFDLKQTLTRL 200 210 220 230 240 250 440 450 460 470 480 pF1KE5 VLQSNGKDYMIRVK------TH-------NFSPDCTEDLIIGSVITS-ATSVIHKDQCFV . . : . :: :: :: . : : : . . ..:. .:. CCDS44 MAHLFGDELEIRWVDCYFPFTHPSFEMEINFHGEWLEVLGCGVMEQQLVNSAGAQDRIGW 260 270 280 290 300 310 490 500 510 520 530 540 pF1KE5 FVSMNLDLLAMLVWCISDWRMLWTFDNRFLKNFVPGKIEP---FKSHSLYPPCYVHDVSF ...:. :::... : : :..: :.::::.: ..:. :. : :: ..:.:: CCDS44 AFGLGLERLAMILYDIPDIRLFWCEDERFLKQFCVSNINQKVKFQPLSKYPAV-INDISF 320 330 340 350 360 550 560 570 580 590 600 pF1KE5 WIDQKKGFDELEFHTVARAVSQDTIISIQFLSRFQHPKTQQVSLCYRLTYQTCDKALTQQ :. ... . : .:. ..:... : . .......: ::::...: :::.::. ...:.:. CCDS44 WLPSEN-YAENDFYDLVRTIGGDLVEKVDLIDKFVHPKTHKTSHCYRITYRHMERTLSQR 370 380 390 400 410 420 610 620 pF1KE5 QVASMQSQFRKEIQQHLYVIPR .: ... ... : : : : CCDS44 EVRHIHQALQEAAVQLLGVEGRF 430 440 450 624 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 06:32:02 2016 done: Tue Nov 8 06:32:02 2016 Total Scan time: 2.660 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]