FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3193, 449 aa 1>>>pF1KE3193 449 - 449 aa - 449 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.7807+/-0.000663; mu= 16.6414+/- 0.040 mean_var=90.1839+/-18.376, 0's: 0 Z-trim(112.7): 12 B-trim: 5 in 1/50 Lambda= 0.135055 statistics sampled from 13381 (13387) to 13381 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.765), E-opt: 0.2 (0.411), width: 16 Scan time: 3.630 The best scores are: opt bits E(32554) CCDS42648.1 CMPK2 gene_id:129607|Hs108|chr2 ( 449) 3079 609.5 2.1e-174 CCDS58696.1 CMPK2 gene_id:129607|Hs108|chr2 ( 409) 2816 558.3 5.3e-159 CCDS58695.1 CMPK2 gene_id:129607|Hs108|chr2 ( 366) 2290 455.7 3.4e-128 >>CCDS42648.1 CMPK2 gene_id:129607|Hs108|chr2 (449 aa) initn: 3079 init1: 3079 opt: 3079 Z-score: 3244.5 bits: 609.5 E(32554): 2.1e-174 Smith-Waterman score: 3079; 100.0% identity (100.0% similar) in 449 aa overlap (1-449:1-449) 10 20 30 40 50 60 pF1KE3 MAFARRLLRGPLSGPLLGRRGVCAGAMAPPRRFVLELPDCTLAHFALGADAPGDADAPDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 MAFARRLLRGPLSGPLLGRRGVCAGAMAPPRRFVLELPDCTLAHFALGADAPGDADAPDP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 RLAALLGPPERSYSLCVPVTPDAGCGARVRAARLHQRLLHQLRRGPFQRCQLLRLLCYCP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 RLAALLGPPERSYSLCVPVTPDAGCGARVRAARLHQRLLHQLRRGPFQRCQLLRLLCYCP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 GGQAGGAQQGFLLRDPLDDPDTRQALLELLGACQEAPRPHLGEFEADPRGQLWQRLWEVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 GGQAGGAQQGFLLRDPLDDPDTRQALLELLGACQEAPRPHLGEFEADPRGQLWQRLWEVQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 DGRRLQVGCAQVVPVPEPPLHPVVPDLPSSVVFPDREAARAVLEECTSFIPEARAVLDLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 DGRRLQVGCAQVVPVPEPPLHPVVPDLPSSVVFPDREAARAVLEECTSFIPEARAVLDLV 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 DQCPKQIQKGKFQVVAIEGLDATGKTTVTQSVADSLKAVLLKSPPSCIGQWRKIFDDEPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 DQCPKQIQKGKFQVVAIEGLDATGKTTVTQSVADSLKAVLLKSPPSCIGQWRKIFDDEPT 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 IIRRAFYSLGNYIVASEIAKESAKSPVIVDRYWHSTATYAIATEVSGGLQHLPPAHHPVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 IIRRAFYSLGNYIVASEIAKESAKSPVIVDRYWHSTATYAIATEVSGGLQHLPPAHHPVY 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 QWPEDLLKPDLILLLTVSPEERLQRLQGRGMEKTREEAELEANSVFRQKVEMSYQRMENP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 QWPEDLLKPDLILLLTVSPEERLQRLQGRGMEKTREEAELEANSVFRQKVEMSYQRMENP 370 380 390 400 410 420 430 440 pF1KE3 GCHVVDASPSREKVLQTVLSLIQNSFSEP ::::::::::::::::::::::::::::: CCDS42 GCHVVDASPSREKVLQTVLSLIQNSFSEP 430 440 >>CCDS58696.1 CMPK2 gene_id:129607|Hs108|chr2 (409 aa) initn: 2816 init1: 2816 opt: 2816 Z-score: 2968.1 bits: 558.3 E(32554): 5.3e-159 Smith-Waterman score: 2816; 100.0% identity (100.0% similar) in 409 aa overlap (1-409:1-409) 10 20 30 40 50 60 pF1KE3 MAFARRLLRGPLSGPLLGRRGVCAGAMAPPRRFVLELPDCTLAHFALGADAPGDADAPDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 MAFARRLLRGPLSGPLLGRRGVCAGAMAPPRRFVLELPDCTLAHFALGADAPGDADAPDP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 RLAALLGPPERSYSLCVPVTPDAGCGARVRAARLHQRLLHQLRRGPFQRCQLLRLLCYCP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 RLAALLGPPERSYSLCVPVTPDAGCGARVRAARLHQRLLHQLRRGPFQRCQLLRLLCYCP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 GGQAGGAQQGFLLRDPLDDPDTRQALLELLGACQEAPRPHLGEFEADPRGQLWQRLWEVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 GGQAGGAQQGFLLRDPLDDPDTRQALLELLGACQEAPRPHLGEFEADPRGQLWQRLWEVQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 DGRRLQVGCAQVVPVPEPPLHPVVPDLPSSVVFPDREAARAVLEECTSFIPEARAVLDLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 DGRRLQVGCAQVVPVPEPPLHPVVPDLPSSVVFPDREAARAVLEECTSFIPEARAVLDLV 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 DQCPKQIQKGKFQVVAIEGLDATGKTTVTQSVADSLKAVLLKSPPSCIGQWRKIFDDEPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 DQCPKQIQKGKFQVVAIEGLDATGKTTVTQSVADSLKAVLLKSPPSCIGQWRKIFDDEPT 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 IIRRAFYSLGNYIVASEIAKESAKSPVIVDRYWHSTATYAIATEVSGGLQHLPPAHHPVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 IIRRAFYSLGNYIVASEIAKESAKSPVIVDRYWHSTATYAIATEVSGGLQHLPPAHHPVY 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 QWPEDLLKPDLILLLTVSPEERLQRLQGRGMEKTREEAELEANSVFRQKVEMSYQRMENP ::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 QWPEDLLKPDLILLLTVSPEERLQRLQGRGMEKTREEAELEANSVFRQK 370 380 390 400 430 440 pF1KE3 GCHVVDASPSREKVLQTVLSLIQNSFSEP >>CCDS58695.1 CMPK2 gene_id:129607|Hs108|chr2 (366 aa) initn: 2290 init1: 2290 opt: 2290 Z-score: 2414.9 bits: 455.7 E(32554): 3.4e-128 Smith-Waterman score: 2290; 100.0% identity (100.0% similar) in 331 aa overlap (1-331:1-331) 10 20 30 40 50 60 pF1KE3 MAFARRLLRGPLSGPLLGRRGVCAGAMAPPRRFVLELPDCTLAHFALGADAPGDADAPDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 MAFARRLLRGPLSGPLLGRRGVCAGAMAPPRRFVLELPDCTLAHFALGADAPGDADAPDP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 RLAALLGPPERSYSLCVPVTPDAGCGARVRAARLHQRLLHQLRRGPFQRCQLLRLLCYCP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 RLAALLGPPERSYSLCVPVTPDAGCGARVRAARLHQRLLHQLRRGPFQRCQLLRLLCYCP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 GGQAGGAQQGFLLRDPLDDPDTRQALLELLGACQEAPRPHLGEFEADPRGQLWQRLWEVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 GGQAGGAQQGFLLRDPLDDPDTRQALLELLGACQEAPRPHLGEFEADPRGQLWQRLWEVQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 DGRRLQVGCAQVVPVPEPPLHPVVPDLPSSVVFPDREAARAVLEECTSFIPEARAVLDLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 DGRRLQVGCAQVVPVPEPPLHPVVPDLPSSVVFPDREAARAVLEECTSFIPEARAVLDLV 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 DQCPKQIQKGKFQVVAIEGLDATGKTTVTQSVADSLKAVLLKSPPSCIGQWRKIFDDEPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 DQCPKQIQKGKFQVVAIEGLDATGKTTVTQSVADSLKAVLLKSPPSCIGQWRKIFDDEPT 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 IIRRAFYSLGNYIVASEIAKESAKSPVIVDRYWHSTATYAIATEVSGGLQHLPPAHHPVY ::::::::::::::::::::::::::::::: CCDS58 IIRRAFYSLGNYIVASEIAKESAKSPVIVDRSQLGGTLYHPSLHLLGSEVCGTGILDSSH 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 QWPEDLLKPDLILLLTVSPEERLQRLQGRGMEKTREEAELEANSVFRQKVEMSYQRMENP CCDS58 SSQGLE 449 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 11:02:35 2016 done: Sun Nov 6 11:02:36 2016 Total Scan time: 3.630 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]