FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE9408, 358 aa 1>>>pF1KE9408 358 - 358 aa - 358 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.7505+/-0.000829; mu= 20.3998+/- 0.050 mean_var=166.7954+/-56.511, 0's: 0 Z-trim(108.2): 164 B-trim: 644 in 1/47 Lambda= 0.099308 statistics sampled from 9849 (10068) to 9849 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.671), E-opt: 0.2 (0.309), width: 16 Scan time: 2.600 The best scores are: opt bits E(32554) CCDS34949.1 GPR20 gene_id:2843|Hs108|chr8 ( 358) 2409 357.7 8.7e-99 >>CCDS34949.1 GPR20 gene_id:2843|Hs108|chr8 (358 aa) initn: 2409 init1: 2409 opt: 2409 Z-score: 1887.0 bits: 357.7 E(32554): 8.7e-99 Smith-Waterman score: 2409; 99.7% identity (100.0% similar) in 358 aa overlap (1-358:1-358) 10 20 30 40 50 60 pF1KE9 MPSVSPAGPSAGAVPNATAVTTVRTNASGLEVPLFHLFARLDEELHGTFPGLWLALMAVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 MPSVSPAGPSAGAVPNATAVTTVRTNASGLEVPLFHLFARLDEELHGTFPGLWLALMAVH 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE9 GAIFLAGLVLNGLALYVFCCRTRAKTPSVIYTINLVVTDLLVGLSLPTRFAVYYGARGCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 GAIFLAGLVLNGLALYVFCCRTRAKTPSVIYTINLVVTDLLVGLSLPTRFAVYYGARGCL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE9 RCAFPHVLGYFLNMHCSILFLTCICVDRYLAIVRPEGSRRCRQPACARAVCAFVWLAAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 RCAFPHVLGYFLNMHCSILFLTCICVDRYLAIVRPEGSRRCRQPACARAVCAFVWLAAGA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE9 VTLSVLGVTGSRPCCRVFALTVLEFLLPLLVISVFTGRIMCALSRPGLLRQGRQRRVRAM :::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::: CCDS34 VTLSVLGVTGSRPCCRVFALTVLEFLLPLLVISVFTGRIMCALSRPGLLHQGRQRRVRAM 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE9 QLLLTVLIIFLVCFTPFHARQVAVALWPDMPHHTSLVVYHVAVTLSSLNSCMDPIVYCFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 QLLLTVLIIFLVCFTPFHARQVAVALWPDMPHHTSLVVYHVAVTLSSLNSCMDPIVYCFV 250 260 270 280 290 300 310 320 330 340 350 pF1KE9 TSGFQATVRGLFGQHGEREPSSGDVVSMHRSSKGSGRHHILSAGPHALTQALANGPEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 TSGFQATVRGLFGQHGEREPSSGDVVSMHRSSKGSGRHHILSAGPHALTQALANGPEA 310 320 330 340 350 358 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 11:16:33 2016 done: Sun Nov 6 11:16:34 2016 Total Scan time: 2.600 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]