################################## # NO CUT ENZYMES ( 143 enzymes) # ################################## AatII Acc65I AccII AclI AcyI AflII AflIII AgeI AhdI AlwNI AocI Aor51HI ApaI AscI AseI AsnI Asp718I AspEI AspI AviII AvrII BalI BamHI BbeI BbrPI BciVI BclI BcnI BfrI BglI BglII BlnI BpmI BsaAI BsaBI BsaHI BsgI BsiEI BsiWI BsmBI BspDI BspLU11I BspMI BsrBI BsrDI BsrFI BssHII BssSI Bst1107I BstAPI BstBI BstEII BstPI BstUI BstXI BstZ17I Bsu36I Cfr10I ClaI CpoI DraI DrdI EaeI EagI Eam1105I EclXI Eco47III Eco52I Eco81I EcoNI EcoO65I EcoRV FauI FbaI FseI FspI HaeII HgaI Hin1I HincII HindII HindIII HpaI KasI KpnI KspI MaeII MaeIII MamI MluI MluNI MscI MseI MvnI NaeI NarI NciI NdeI NgoMIV NheI NotI NruI NspV PacI PaeR7I PflFI PflMI PinAI PmaCI PmeI PmlI PshBI Psp1406I PstI PvuI RsrII SacI SacII SalI SbfI ScaI SexAI SfiI SfoI SfuI SgrAI SmaI SnaBI SpeI SphI Sse8387I SspI StuI SwaI Tru9I Tsp45I Tth111I Van91I XbaI XcmI XhoI XmaCI XmaI ################################### # ONE CUT ENZYMES ( 72 enzymes) # ################################### AccI 520 GTCTAC GT^[AC][GT]AC AccIII 872 TCCGGA T^CCGGA AcsI 852 GAATTC [GA]^AATT[CT] AfaI 597 GTAC GT^AC Alw44I 792 GTGCAC G^TGCAC ApaLI 792 GTGCAC G^TGCAC ApoI 852 GAATTC [GA]^AATT[CT] Asp700I 331 GAATGTTTTC GAA[ACGT][ACGT]^[ACGT][ACGT]TTC AvaI 962 CCCGAG C^[CT]CG[GA]G AvaII 785 GGTCC G^G[AT]CC BanI 754 GGTGCC G^G[CT][GA]CC BanII 46 GGGCTC G[GA]GC[CT]^C BbvCI 909 GCTGAGG CCTCAGC(-5/-2) BbvI 605 GCAGC GCAGC(8/12) BcgI 482 CGATCTTGATGC (10/12)CGA[ACGT][ACGT][ACGT][ACGT][ACGT][ACGT]TGC(12/10) BfaI 319 CTAG C^TAG BlpI 186 GCTCAGC GC^T[ACGT]AGC Bpu1102I 186 GCTCAGC GC^T[ACGT]AGC BsaWI 872 TCCGGA [AT]^CCGG[AT] BseAI 872 TCCGGA T^CCGGA BsoBI 962 CCCGAG C^[CT]CG[GA]G Bsp1407I 596 TGTACA T^GTACA BspEI 872 TCCGGA T^CCGGA BspHI 404 TCATGA T^CATGA BsrGI 596 TGTACA T^GTACA BssKI 782 CCAGG ^CC[ACGT]GG BstNI 782 CCAGG CC^[AT]GG BstYI 207 GGATCT [GA]^GATC[CT] CelII 186 GCTCAGC GC^T[ACGT]AGC DraII 784 AGGTCCC [GA]G^G[ACGT]CC[CT] DraIII 927 CACCCAGTG CAC[ACGT][ACGT][ACGT]^GTG DsaI 92 CCATGG C^C[GA][CT]GG EcoO109I 784 AGGTCCC [GA]G^G[ACGT]CC[CT] EcoRI 852 GAATTC G^AATTC EcoRII 782 CCAGG ^CC[AT]GG EcoT14I 92 CCATGG C^C[AT][AT]GG EcoT22I 214 ATGCAT ATGCA^T Fnu4HI 605 GCAGC GC^[ACGT]GC HaeIII 509 GGCC GG^CC HapII 873 CCGG C^CGG HpaII 873 CCGG C^CGG ItaI 605 GCAGC GC^[ACGT]GC MaeI 319 CTAG C^TAG MfeI 949 CAATTG C^AATTG MflI 207 GGATCT [GA]^GATC[CT] MroI 872 TCCGGA T^CCGGA MspA1I 545 CAGCTG C[AC]G^C[GT]G MspI 873 CCGG C^CGG MunI 949 CAATTG C^AATTG MvaI 782 CCAGG CC^[AT]GG MwoI 186 GCTCAGCCAGC GC[ACGT][ACGT][ACGT][ACGT][ACGT]^[ACGT][ACGT]GC NcoI 92 CCATGG C^CATGG NsiI 214 ATGCAT ATGCA^T NspI 216 GCATGT [GA]CATG^[CT] PleI 58 GACTC GAGTC(4/5) PpuMI 784 AGGTCCC [GA]G^G[AT]CC[CT] PshAI 779 GACCCAGGTC GAC[ACGT][ACGT]^[ACGT][ACGT]GTC PvuII 545 CAGCTG CAG^CTG RcaI 404 TCATGA T^CATGA RsaI 597 GTAC GT^AC SapI 48 GCTCTTC GCTCTTC(1/4) ScrFI 782 CCAGG CC^[ACGT]GG SfcI 828 CTACAG C^T[GA][CT]AG SmlI 40 CTTGAG C^T[CT][GA]AG SspBI 596 TGTACA T^GTACA StyI 92 CCATGG C^C[AT][AT]GG TaqI 53 TCGA T^CGA TfiI 12 GAATC G^A[AT]TC TseI 605 GCAGC G^C[AT]GC TthHB8I 53 TCGA T^CGA XhoII 207 GGATCT [GA]^GATC[CT] XmnI 331 GAATGTTTTC GAA[ACGT][ACGT]^[ACGT][ACGT]TTC ################################### # TWO CUT ENZYMES ( 20 enzymes) # ################################### AciI 363 CCGC CCGC(-3/-1) 112 GCGG AlwI 154 GATCC GGATC(4/5) 207 GGATC AspHI 400 GTGCTC G[AT]GC[AT]^C 792 GTGCAC BbsI 100 GTCTTC GAAGAC(2/6) 652 GTCTTC BpuAI 100 GTCTTC GAAGAC(2/6) 652 GTCTTC BsaI 586 GAGACC GGTCTC(1/5) 777 GAGACC BsiHKAI 400 GTGCTC G[AT]GC[AT]^C 792 GTGCAC BsmFI 420 GGGAC GGGAC(10/14) 786 GTCCC BsmI 608 GCATTC GAATGC(1/-1) 935 GCATTC BsrI 789 CCAGT ACTGG(1/-1) 930 CCAGT Cac8I 191 GCCAGC GC[ACGT]^[ACGT]GC 757 GCCTGC CfoI 390 GCGC GCG^C 681 GCGC Cfr13I 508 GGGCC G^G[ACGT]CC 785 GGTCC EarI 49 CTCTTC CTCTTC(1/4) 902 GAAGAG HhaI 390 GCGC GCG^C 681 GCGC HinP1I 390 GCGC G^CGC 681 GCGC HinfI 12 GAATC G^A[ACGT]TC 58 GACTC Ksp632I 49 CTCTTC CTCTTC(1/4) 902 GAAGAG MslI 573 CATCACTGTG CA[CT][ACGT][ACGT]^[ACGT][ACGT][GA]TG 672 CATTCAGATG Sau96I 508 GGGCC G^G[ACGT]CC 785 GGTCC ######################################### # 3 OR MORE CUT ENZYMES ( 23 enzymes) # ######################################### AluI BmyI BsaJI BseRI BsiYI BslI BsmAI Bsp1286I BstF5I DdeI DpnII FokI HphI MboI MboII MnlI NdeII NlaIII NlaIV Sau3AI SfaNI Tsp509I TspRI