FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1585, 92 aa 1>>>pF1KE1585 92 - 92 aa - 92 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.4400+/-0.000473; mu= 14.9626+/- 0.029 mean_var=67.3024+/-13.396, 0's: 0 Z-trim(116.7): 7 B-trim: 0 in 0/53 Lambda= 0.156336 statistics sampled from 17305 (17309) to 17305 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.865), E-opt: 0.2 (0.532), width: 16 Scan time: 1.680 The best scores are: opt bits E(32554) CCDS46057.1 HCST gene_id:10870|Hs108|chr19 ( 92) 610 144.5 8.9e-36 CCDS32998.1 HCST gene_id:10870|Hs108|chr19 ( 93) 598 141.8 5.9e-35 >>CCDS46057.1 HCST gene_id:10870|Hs108|chr19 (92 aa) initn: 610 init1: 610 opt: 610 Z-score: 755.8 bits: 144.5 E(32554): 8.9e-36 Smith-Waterman score: 610; 100.0% identity (100.0% similar) in 92 aa overlap (1-92:1-92) 10 20 30 40 50 60 pF1KE1 MIHLGHILFLLLLPVAAAQTTPGERSSLPAFYPGTSGSCSGCGSLSLPLLAGLVAADAVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 MIHLGHILFLLLLPVAAAQTTPGERSSLPAFYPGTSGSCSGCGSLSLPLLAGLVAADAVA 10 20 30 40 50 60 70 80 90 pF1KE1 SLLIVGAVFLCARPRRSPAQDGKVYINMPGRG :::::::::::::::::::::::::::::::: CCDS46 SLLIVGAVFLCARPRRSPAQDGKVYINMPGRG 70 80 90 >>CCDS32998.1 HCST gene_id:10870|Hs108|chr19 (93 aa) initn: 535 init1: 525 opt: 598 Z-score: 741.1 bits: 141.8 E(32554): 5.9e-35 Smith-Waterman score: 598; 98.9% identity (98.9% similar) in 93 aa overlap (1-92:1-93) 10 20 30 40 50 60 pF1KE1 MIHLGHILFLLLLPVAAAQTTPGERSSLPAFYPGTSGSCSGCGSLSLPLLAGLVAADAVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 MIHLGHILFLLLLPVAAAQTTPGERSSLPAFYPGTSGSCSGCGSLSLPLLAGLVAADAVA 10 20 30 40 50 60 70 80 90 pF1KE1 SLLIVGAVFLCARPRRSPAQ-DGKVYINMPGRG :::::::::::::::::::: :::::::::::: CCDS32 SLLIVGAVFLCARPRRSPAQEDGKVYINMPGRG 70 80 90 92 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 12:12:21 2016 done: Sun Nov 6 12:12:21 2016 Total Scan time: 1.680 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]