FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1610, 115 aa 1>>>pF1KE1610 115 - 115 aa - 115 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.0142+/-0.000223; mu= 8.1718+/- 0.014 mean_var=82.6994+/-16.684, 0's: 0 Z-trim(125.1): 1 B-trim: 2431 in 1/55 Lambda= 0.141034 statistics sampled from 48228 (48234) to 48228 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.869), E-opt: 0.2 (0.566), width: 16 Scan time: 5.440 The best scores are: opt bits E(85289) NP_004731 (OMIM: 609517) TGFB1-induced anti-apopto ( 115) 810 172.7 1.2e-43 >>NP_004731 (OMIM: 609517) TGFB1-induced anti-apoptotic (115 aa) initn: 810 init1: 810 opt: 810 Z-score: 904.8 bits: 172.7 E(85289): 1.2e-43 Smith-Waterman score: 810; 100.0% identity (100.0% similar) in 115 aa overlap (1-115:1-115) 10 20 30 40 50 60 pF1KE1 MSSPSSPFREQSFLCAAGDAGEESRVQVLKNEVRRGSPVLLGWVEQAYADKCVCGPSAPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 MSSPSSPFREQSFLCAAGDAGEESRVQVLKNEVRRGSPVLLGWVEQAYADKCVCGPSAPP 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 APTPPSLSQRVMCNDLFKVNPFQLQQFRADPSTASLLLCPGGLDHKLNLRGKAWG ::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 APTPPSLSQRVMCNDLFKVNPFQLQQFRADPSTASLLLCPGGLDHKLNLRGKAWG 70 80 90 100 110 115 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 12:15:38 2016 done: Sun Nov 6 12:15:38 2016 Total Scan time: 5.440 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]