FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB7941, 343 aa 1>>>pF1KB7941 343 - 343 aa - 343 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.8340+/-0.000296; mu= 3.2090+/- 0.019 mean_var=237.6187+/-47.949, 0's: 0 Z-trim(125.4): 182 B-trim: 720 in 1/58 Lambda= 0.083202 statistics sampled from 48878 (49150) to 48878 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.843), E-opt: 0.2 (0.576), width: 16 Scan time: 9.710 The best scores are: opt bits E(85289) NP_068777 (OMIM: 142995) H2.0-like homeobox protei ( 488) 351 54.2 7.1e-07 NP_002720 (OMIM: 604420) hematopoietically-express ( 270) 287 46.3 9.4e-05 XP_011541345 (OMIM: 604823) PREDICTED: homeobox pr ( 233) 282 45.6 0.00013 NP_003649 (OMIM: 604823) homeobox protein BarH-lik ( 279) 282 45.7 0.00015 NP_067545 (OMIM: 603260) homeobox protein BarH-lik ( 254) 274 44.7 0.00027 NP_005212 (OMIM: 220600,600028) homeobox protein D ( 289) 273 44.6 0.00032 NP_006159 (OMIM: 602563) homeobox protein Nkx-6.1 ( 367) 275 44.9 0.00032 NP_066305 (OMIM: 604640) T-cell leukemia homeobox ( 291) 266 43.8 0.00057 NP_005506 (OMIM: 142994,176450) motor neuron and p ( 401) 268 44.1 0.00061 NP_005211 (OMIM: 104510,190320,600525) homeobox pr ( 287) 257 42.7 0.0012 NP_038463 (OMIM: 601881,611038) retinal homeobox p ( 346) 253 42.3 0.0019 NP_796374 (OMIM: 605955) homeobox protein Nkx-6.2 ( 277) 251 41.9 0.0019 NP_076921 (OMIM: 142963) homeobox protein Hox-B8 [ ( 243) 249 41.7 0.0021 XP_016880053 (OMIM: 142963) PREDICTED: homeobox pr ( 243) 249 41.7 0.0021 XP_016872278 (OMIM: 605955) PREDICTED: homeobox pr ( 277) 250 41.8 0.0021 NP_064447 (OMIM: 605212) barH-like 2 homeobox prot ( 387) 252 42.2 0.0023 NP_001091639 (OMIM: 611074) brain-specific homeobo ( 233) 240 40.6 0.0042 XP_011541346 (OMIM: 604823) PREDICTED: homeobox pr ( 134) 235 39.7 0.0043 XP_005257343 (OMIM: 142963) PREDICTED: homeobox pr ( 242) 239 40.5 0.0047 NP_064448 (OMIM: 605211) barH-like 1 homeobox prot ( 327) 241 40.8 0.005 NP_001256 (OMIM: 600297) homeobox protein CDX-2 [H ( 313) 240 40.7 0.0052 NP_109377 (OMIM: 142954) homeobox protein Hox-A3 i ( 443) 243 41.2 0.0053 XP_006715778 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 243 41.2 0.0053 XP_011513645 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 243 41.2 0.0053 XP_005249789 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 243 41.2 0.0053 XP_005249787 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 243 41.2 0.0053 NP_705895 (OMIM: 142954) homeobox protein Hox-A3 i ( 443) 243 41.2 0.0053 XP_005249788 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 243 41.2 0.0053 NP_001158727 (OMIM: 142994,176450) motor neuron an ( 189) 235 39.9 0.0055 XP_011538046 (OMIM: 186770) PREDICTED: T-cell leuk ( 342) 238 40.5 0.0066 NP_149416 (OMIM: 607808) homeobox protein Nkx-2.4 ( 354) 238 40.5 0.0068 NP_006483 (OMIM: 136760,606014) homeobox protein a ( 343) 236 40.2 0.0078 XP_016867292 (OMIM: 220600,600028) PREDICTED: home ( 161) 229 39.1 0.008 XP_005250242 (OMIM: 220600,600028) PREDICTED: home ( 161) 229 39.1 0.008 NP_006553 (OMIM: 604255) transcription factor LBX1 ( 281) 233 39.8 0.0087 NP_001129743 (OMIM: 217095,611770) homeobox protei ( 301) 233 39.8 0.0091 XP_011538047 (OMIM: 186770) PREDICTED: T-cell leuk ( 269) 231 39.5 0.0099 >>NP_068777 (OMIM: 142995) H2.0-like homeobox protein [H (488 aa) initn: 375 init1: 306 opt: 351 Z-score: 244.4 bits: 54.2 E(85289): 7.1e-07 Smith-Waterman score: 392; 33.1% identity (54.4% similar) in 329 aa overlap (5-298:77-392) 10 20 30 pF1KB7 MMFPGLLAPPAGYP----SLLRPTPTLTLPQSLQ : . : :.. : :::::... :. . NP_068 ADILHAGVGDLGAAPEGLAGASAAALTAHLGSVHPHASFQAAARSPLRPTPVVA-PSEVP 50 60 70 80 90 100 40 50 60 70 80 90 pF1KB7 SAFSGHSSFLVEDLIRISRPPAYLPRSVPTASMSPPRQGAPTALTDTGASDLGSPGPGSR ..: . : : . .: .. : .. :: : : :: : :. :.: NP_068 AGFPQRLSPLSAAYHH-HHPQQQQQQQQPQQQQPPP---PPRA----GA--LQPPASGTR 110 120 130 140 150 100 110 120 130 140 pF1KB7 RGGSPPTAFS-PASETTFLKFGVNAILSS--GPRTETSPALLQSVPPKTFAFP------- .: . : :: . ::::.. :::. :... . .: . . : . : NP_068 VVPNPHHSGSAPAPSSKDLKFGIDRILSAEFDPKVKEGNTLRDLTSLLTGGRPAGVHLSG 160 170 180 190 200 210 150 160 170 180 pF1KB7 ------YFEGSFQPFIRSSYF-------PASSSVVPIPGTFSWPLAARGK---P----RR : .:..:. ..: . : .: . :: : :. : : :. NP_068 LQPSAGQFFASLDPINEASAILSPLNSNPRNSVQHQFQDTFPGPYAVLTKDTMPQTYKRK 220 230 240 250 260 270 190 200 210 220 230 240 pF1KB7 GMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAAKLGLKDSQVKIWFQNRRMKWRNSK :::::..:::.::: :. :::..:::::.::: ::: :.:::.::::::::::.:: NP_068 RSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSK 280 290 300 310 320 330 250 260 270 280 290 pF1KB7 ERELLSSGGCREQTLPTKLNPHPDLSDVGQKGPGNEE-EEEGPGSPSHRLAYHASSDPQH : . .. . :. : : .. ...:. : : :. .: :. : . : :: . NP_068 EAQAQKDKDKEAGEKPSGGAPAAD-GEQDERSPSRSEGEAESESSDSESLDM-APSDTER 340 350 360 370 380 390 300 310 320 330 340 pF1KB7 LRDPRLPGPLPPSPAHSSSPGKPSDFSDSEEEEEGEEQEEITVS NP_068 TEGSERSLHQTTVIKAPVTGALITASSAGSGGSSGGGGNSFSFSSASSLSSSSTSAGCAS 400 410 420 430 440 450 >>NP_002720 (OMIM: 604420) hematopoietically-expressed h (270 aa) initn: 249 init1: 226 opt: 287 Z-score: 206.3 bits: 46.3 E(85289): 9.4e-05 Smith-Waterman score: 287; 28.7% identity (51.7% similar) in 265 aa overlap (51-302:8-259) 30 40 50 60 70 pF1KB7 PTLTLPQSLQSAFSGHSSFLVEDLIRISRPPAYLPRSVPTASMSP---PRQGAPTALTDT :: .:: . .: : . .: . : NP_002 MQYPHPGPAAGAVGVPLYAPTPLLQPAHPTPFYIEDI 10 20 30 80 90 100 110 120 130 pF1KB7 GASDLGSPGPGSRRGGSPPTAF----SPASETTFLKFGVNAILSSGPRTETSPALLQSVP . ..: :. :: ..: :: .. .. .: ... :: . NP_002 LGRGPAAPTPAPTLP-SPNSSFTSLVSPYRTPVYEPTPIHPAFSH----HSAAALAAAYG 40 50 60 70 80 90 140 150 160 170 180 pF1KB7 PKTFAFPYFEGSFQPFIRS--SYFPASSSVVPIPGTFSW-PLAARGKPRR--GMLRRAVF : :. : . :: :. .: : :. . : :. : .: :..: : NP_002 PGGFGGPLY-----PFPRTVNDYTHALLRHDPLGKPLLWSPFLQRPLHKRKGGQVR---F 100 110 120 130 140 190 200 210 220 230 240 pF1KB7 SDVQRKALEKMFQKQKYISKPDRKKLAAKLGLKDSQVKIWFQNRRMKWRNSKERELLSSG :. : ::: :. :::.: :.::.:: : :.. ::: :::::: ::: :... :. NP_002 SNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQSNK 150 160 170 180 190 200 250 260 270 280 290 300 pF1KB7 GCREQTLPTKLNPHPDLSDVGQKGPGNEEEEEGPGSPSHR-LAYHASSDPQHLRDPRLPG . ..: .. . . :: . .:: . . . .:. :.. : . : : .. : NP_002 KEELESLDSSCDQRQDLPSEQNKGASLDSSQCSPSPASQEDLESEISEDSDQEVDIEGDK 210 220 230 240 250 260 310 320 330 340 pF1KB7 PLPPSPAHSSSPGKPSDFSDSEEEEEGEEQEEITVS NP_002 SYFNAG 270 >>XP_011541345 (OMIM: 604823) PREDICTED: homeobox protei (233 aa) initn: 224 init1: 202 opt: 282 Z-score: 203.9 bits: 45.6 E(85289): 0.00013 Smith-Waterman score: 282; 32.6% identity (59.4% similar) in 175 aa overlap (152-319:61-229) 130 140 150 160 170 180 pF1KB7 TETSPALLQSVPPKTFAFPYFEGSFQPFIRSSYFPASSSVVPIPGTFSWPLAARGKPRRG :. :.. ... . : . ::::. XP_011 TRQPTVISHLVPATPGIAQALSCHQVTEAVSAEAPGGEALASSESETEQPTPRQKKPRRS 40 50 60 70 80 90 190 200 210 220 230 pF1KB7 MLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAAKLGLKDSQVKIWFQNRRMKWRN--- :..:...: .::: ::::::.: ::: :: .::: . ::: :.:::::::.. XP_011 ---RTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVL 100 110 120 130 140 240 250 260 270 280 290 pF1KB7 --SKERELLSSGGCREQTLPTKLNPHPDLSDVGQKGPGNEEEEEGPGSPSHRLAYH--AS ..: .: .....::. . . . ..... :.:. : . :. : . : XP_011 KGGQEAPTKPKGRPKKNSIPTSEEIEAE-EKMNSQAQGQEQLEPSQGQEELCEAQEPKAR 150 160 170 180 190 200 300 310 320 330 340 pF1KB7 SDPQHLRDPRLPGPLPPSPAHSSSPGKPSDFSDSEEEEEGEEQEEITVS . : .. .: : : : :: : XP_011 DVPLEMAEP--PDPPQELPIPSSEPPPLS 210 220 230 >>NP_003649 (OMIM: 604823) homeobox protein BarH-like 2 (279 aa) initn: 224 init1: 202 opt: 282 Z-score: 202.9 bits: 45.7 E(85289): 0.00015 Smith-Waterman score: 282; 32.6% identity (59.4% similar) in 175 aa overlap (152-319:107-275) 130 140 150 160 170 180 pF1KB7 TETSPALLQSVPPKTFAFPYFEGSFQPFIRSSYFPASSSVVPIPGTFSWPLAARGKPRRG :. :.. ... . : . ::::. NP_003 TRQPTVISHLVPATPGIAQALSCHQVTEAVSAEAPGGEALASSESETEQPTPRQKKPRRS 80 90 100 110 120 130 190 200 210 220 230 pF1KB7 MLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAAKLGLKDSQVKIWFQNRRMKWRN--- :..:...: .::: ::::::.: ::: :: .::: . ::: :.:::::::.. NP_003 ---RTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVL 140 150 160 170 180 190 240 250 260 270 280 290 pF1KB7 --SKERELLSSGGCREQTLPTKLNPHPDLSDVGQKGPGNEEEEEGPGSPSHRLAYH--AS ..: .: .....::. . . . ..... :.:. : . :. : . : NP_003 KGGQEAPTKPKGRPKKNSIPTSEEIEAE-EKMNSQAQGQEQLEPSQGQEELCEAQEPKAR 200 210 220 230 240 250 300 310 320 330 340 pF1KB7 SDPQHLRDPRLPGPLPPSPAHSSSPGKPSDFSDSEEEEEGEEQEEITVS . : .. .: : : : :: : NP_003 DVPLEMAEP--PDPPQELPIPSSEPPPLS 260 270 >>NP_067545 (OMIM: 603260) homeobox protein BarH-like 1 (254 aa) initn: 339 init1: 218 opt: 274 Z-score: 198.2 bits: 44.7 E(85289): 0.00027 Smith-Waterman score: 341; 35.7% identity (57.7% similar) in 227 aa overlap (85-288:39-250) 60 70 80 90 100 110 pF1KB7 PRSVPTASMSPPRQGAPTALTDTGASDLGSPGPGSRRGGSPPTAFSPASETTFLKFGVNA ::: .:..: .: . :.: .:::::.: NP_067 AARFGPPEGCADHRPHRYRSFMIEEILTEPPGP---KGAAPAAAAAAAGE--LLKFGVQA 10 20 30 40 50 60 120 130 140 150 160 170 pF1KB7 ILSSGPRTETSPALLQSVPPKTFAFPYFEGSFQPFIRSSYFPASSSVVP-IPGTFSWP-- .:.. : .. :.:.. .: :: . :. :. : .. : .::. . : NP_067 LLAARP-FHSHLAVLKAEQAAVFKFP-----LAPLGCSGLSSALLAAGPGLPGAAGAPHL 70 80 90 100 110 180 190 200 210 pF1KB7 ---LAARGK-----P-------RRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAA : ::: : ..: :.::...: .::: :.::::.: ::: :: NP_067 PLELQLRGKLEAAGPGEPGTKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAE 120 130 140 150 160 170 220 230 240 250 260 270 pF1KB7 KLGLKDSQVKIWFQNRRMKWRNSKERELLSSGGCREQTLPT---KLNPHPDLSDVGQ--K .:::.. ::: :.:::::::. . .:..:: . : : : : : .. . . NP_067 SLGLSQLQVKTWYQNRRMKWK----KIVLQGGGLESPTKPKGRPKKNSIPTSEQLTEQER 180 190 200 210 220 230 280 290 300 310 320 330 pF1KB7 GPGNEEEEEGPGSPSHRLAYHASSDPQHLRDPRLPGPLPPSPAHSSSPGKPSDFSDSEEE . :. : :: :: : NP_067 AKDAEKPAEVPGEPSDRSRED 240 250 >>NP_005212 (OMIM: 220600,600028) homeobox protein DLX-5 (289 aa) initn: 270 init1: 210 opt: 273 Z-score: 196.8 bits: 44.6 E(85289): 0.00032 Smith-Waterman score: 279; 29.4% identity (56.7% similar) in 245 aa overlap (60-297:24-241) 30 40 50 60 70 80 pF1KB7 QSAFSGHSSFLVEDLIRISRPPAYLPRSVPTASMSPPRQGAPTALTDTGA--SDLGSPGP .:.: : : .:: : ...: :: :: NP_005 MTGVFDRRVPSIRSGDFQAPFQTSAAMHHPSQESPT-LPESSATDSDYYSPTG 10 20 30 40 50 90 100 110 120 130 140 pF1KB7 GSRRGGSPPTAFSPASETTFLKF---GVNAILSSGPRTETSPALLQSVPPKTFAFPYFEG :. .: ::. : .. . .. :::. :.: : : :..: . . NP_005 GAPHGYCSPTSASYGKALNPYQYQYHGVNG--SAG-----------SYPAKAYADYSYAS 60 70 80 90 150 160 170 180 190 200 pF1KB7 SFQPFIRSSYFPASSSVVPIPGTFSWPLA--ARGKPRRGMLRRAVFSDVQRKALEKMFQK :.. . ..: . :.. . : . . :::.. :...:. : ::.. ::: NP_005 SYHQY-GGAYNRVPSATNQPEKEVTEPEVRMVNGKPKKVRKPRTIYSSFQLAALQRRFQK 100 110 120 130 140 150 210 220 230 240 250 260 pF1KB7 QKYISKPDRKKLAAKLGLKDSQVKIWFQNRRMKWRNSKERELLSSGGCREQTLPTKLNPH .:.. :.: .:::.::: ..::::::::.: :: ......: . :.. .: NP_005 TQYLALPERAELAASLGLTQTQVKIWFQNKR-----SKIKKIMKNGEMPPEHSPSSSDP- 160 170 180 190 200 210 270 280 290 300 310 320 pF1KB7 PDLSDVGQKGPGNEEEEEGPGSPSHRLAYHASSDPQHLRDPRLPGPLPPSPAHSSSPGKP .. ..: . : :: :. :..: . : NP_005 -----MACNSPQSPAVWEPQGS-SRSLSHHPHAHPPTSNQSPASSYLENSASWYTSAASS 220 230 240 250 260 330 340 pF1KB7 SDFSDSEEEEEGEEQEEITVS NP_005 INSHLPPPGSLQHPLALASGTLY 270 280 >>NP_006159 (OMIM: 602563) homeobox protein Nkx-6.1 [Hom (367 aa) initn: 296 init1: 219 opt: 275 Z-score: 196.8 bits: 44.9 E(85289): 0.00032 Smith-Waterman score: 289; 31.9% identity (55.3% similar) in 257 aa overlap (4-247:69-302) 10 20 30 pF1KB7 MMFPGLLAPPA--GYPSLLRPTPTLTLPQSLQS :: : ::: : :: : ::.: : NP_006 AYPPLPAGPPSSSSSSSSSSSPSPPLGTHNPGGLKPPATGGLSSLGSP------PQQL-S 40 50 60 70 80 90 40 50 60 70 80 pF1KB7 AFSGHSSFLVEDLI-RISRP---PAYLPRSVPTASMSPPRQGAPT-----ALTDTGASDL : . :. ..:.. : : : : :: . :..: : ..: . : . ..:. NP_006 AATPHG---INDILSRPSMPVASGAALPSASPSGSSSSSSSSASASSASAAAAAAAAAAA 100 110 120 130 140 90 100 110 120 130 140 pF1KB7 GSPGPGSRRGGSPP-TAFSPASETTFLKFGVNAILSSGPRTETSPALLQSVPPKTFAFPY .. .:.. .: : ...:: : :. .: .. .: : .: .: : NP_006 AASSPAGLLAGLPRFSSLSPPPPPPGLYFSPSAAAVAAVGRYPKP--LAELPGRTPIF-- 150 160 170 180 190 200 150 160 170 180 190 200 pF1KB7 FEGSFQ-PFIRSSYFPASSSVVPIPGTFSWPLAARGKPRRGMLRRAVFSDVQRKALEKMF . : .: : :.. . . : :.. : :: .. : .:: : :::: : NP_006 WPGVMQSPPWRDARLACT----PHQGSIL--LDKDGKRKH---TRPTFSGQQIFALEKTF 210 220 230 240 250 210 220 230 240 250 260 pF1KB7 QKQKYISKPDRKKLAAKLGLKDSQVKIWFQNRRMKWRNSKERELLSSGGCREQTLPTKLN .. ::.. :.: .:: .::. .::::.:::::: :::... :. .. NP_006 EQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEMATAKKKQDSETERLKG 260 270 280 290 300 310 270 280 290 300 310 320 pF1KB7 PHPDLSDVGQKGPGNEEEEEGPGSPSHRLAYHASSDPQHLRDPRLPGPLPPSPAHSSSPG NP_006 ASENEEEDDDYNKPLDPNSDDEKITQLLKKHKSSSGGGGGLLLHASEPESSS 320 330 340 350 360 >>NP_066305 (OMIM: 604640) T-cell leukemia homeobox prot (291 aa) initn: 243 init1: 193 opt: 266 Z-score: 192.3 bits: 43.8 E(85289): 0.00057 Smith-Waterman score: 290; 32.4% identity (54.4% similar) in 241 aa overlap (64-273:26-260) 40 50 60 70 80 90 pF1KB7 SGHSSFLVEDLIRISRPPAYLPRSVPTASMSPPRQGAPTALTDTGASDLGSPGPGSRRGG :: ...::. ::: ::.: ::.: :. NP_066 MEAPASAQTPHPHEPISFGIDQILNSPDQDSAPAPRGPDGASYLGGP-PGGRPGA 10 20 30 40 50 100 110 120 130 pF1KB7 SPPTAFSPASET----TFLKFGVNAI-LSSGP----RTETSPALLQSVPPKT-------- . :. ::: . : : .. :: .: :. . : .::: NP_066 TYPSL--PASFAGLGAPFEDAGSYSVNLSLAPAGVIRVPAHRPLPGAVPPPLPSALPAMP 60 70 80 90 100 110 140 150 160 170 180 pF1KB7 ----------FAFPYFEGSFQPFIRSSYFPASSSVVPIPGT--FSWPLAARGKPRRGMLR . ::..:.: . :... : :.....:. : .. : : :.: : NP_066 SVPTVSSLGGLNFPWMESSRR-FVKDR-FTAAAALTPFTVTRRIGHPYQNRTPPKRKKPR 120 130 140 150 160 170 190 200 210 220 230 240 pF1KB7 RAVFSDVQRKALEKMFQKQKYISKPDRKKLAAKLGLKDSQVKIWFQNRRMKWR--NSKER . :: :: ::: :..:::... .: :: .: . :.::: :::::: ::: ...:: NP_066 TS-FSRVQICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTAEER 180 190 200 210 220 250 260 270 280 290 300 pF1KB7 ELLSSGGCREQTLPTKLNPHPDLSDVGQKGPGNEEEEEGPGSPSHRLAYHASSDPQHLRD : . . : . . . .:.: : : NP_066 EAERQQASRLMLQLQHDAFQKSLNDSIQPDPLCLHNSSLFALQNLQPWEEDSSKVPAVTS 230 240 250 260 270 280 310 320 330 340 pF1KB7 PRLPGPLPPSPAHSSSPGKPSDFSDSEEEEEGEEQEEITVS NP_066 LV 290 >>NP_005506 (OMIM: 142994,176450) motor neuron and pancr (401 aa) initn: 340 init1: 187 opt: 268 Z-score: 191.7 bits: 44.1 E(85289): 0.00061 Smith-Waterman score: 268; 29.3% identity (53.7% similar) in 283 aa overlap (70-330:122-388) 40 50 60 70 80 90 pF1KB7 LVEDLIRISRPPAYLPRSVPTASMSPPRQGAPTALTDTGASDLGSPGPGSRRGGSPPTAF : .: . ..:. :. . : . ::. : NP_005 PKPGFLGAGGGGGGTGGGHGGPHHHAHPGAAAAAAAAAAAAAAGGLALGLHPGGAQGGAG 100 110 120 130 140 150 100 110 120 130 140 pF1KB7 SPASETTFLK--FGVNAILSSGPRTETSPALLQSVPPKTFAFPYFE--------GSFQ-- ::. . . . .: .: ... . ::: : : : : :.:: NP_005 LPAQAALYGHPVYGYSAAAAAAALAGQHPALSYSYPQVQGAHPAHPADPIKLGAGTFQLD 160 170 180 190 200 210 150 160 170 180 190 200 pF1KB7 PFIRSSYFPASSSVVP-IPGTFSWPLAAR-GKPRRGMLRRAVFSDVQRKALEKMFQKQKY ..:.: ... ..: .: : . :: :: :..:.. : ::..:. .:: NP_005 QWLRAS---TAGMILPKMPDFNSQAQSNLLGKCRRP---RTAFTSQQLLELEHQFKLNKY 220 230 240 250 260 210 220 230 240 250 260 pF1KB7 ISKPDRKKLAAKLGLKDSQVKIWFQNRRMKWRNSKERELLSSGGCREQTLPTKLNPHPDL .:.: : ..:..: : ..:::::::::::::. ::. .::. . . NP_005 LSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRSKK--------AKEQAAQEAEKQKGGG 270 280 290 300 310 270 280 290 300 310 pF1KB7 SDVGQKG---PGNEEEEEGPGSPS-----HRLAYHASSDPQHLRDPRLPGPLPPSPAHSS . .:. : :: :: :: .:. .:: .:::.. .: .: : . .: NP_005 GGAGKGGAEEPGAEELL-GPPAPGDKGSGRRLRDLRDSDPEEDEDEDDEDHFPYSNG-AS 320 330 340 350 360 370 320 330 340 pF1KB7 SPGKPSDFSDSEEEEEGEEQEEITVS . :: :. .. NP_005 VHAASSDCSSEDDSPPPRPSHQPAPQ 380 390 400 >>NP_005211 (OMIM: 104510,190320,600525) homeobox protei (287 aa) initn: 276 init1: 220 opt: 257 Z-score: 186.5 bits: 42.7 E(85289): 0.0012 Smith-Waterman score: 299; 29.1% identity (54.2% similar) in 275 aa overlap (68-324:27-282) 40 50 60 70 80 90 pF1KB7 SFLVEDLIRISRPPAYLPRSVPTASMSPPRQGAPTALTDTGASDLGS-PGPGSRRGGSPP . .:: : .....::: .: .. : NP_005 MSGSFDRKLSSILTDISSSLSCHAGSKDSPT-LPESSVTDLGYYSAPQHDYYSGQP 10 20 30 40 50 100 110 120 130 140 150 pF1KB7 TAFSPASETTFLKFGVNAILSSGPRTETSPALLQSVPPKTFAFPYFE-GSFQPFIRSSYF . . : .:..:.. ..: . : :.. : . :.. : . . NP_005 YGQTVNPYTYHHQFNLNGLAGTGAYSPKSEY--------TYGASYRQYGAY----REQPL 60 70 80 90 100 160 170 180 190 200 210 pF1KB7 PASSSVVPIPGTFSWPLAARGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLA ::.. : . . :::.. :...:. : ::.. ::: .:.. :.: .:: NP_005 PAQDPVSVKEEPEAEVRMVNGKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELA 110 120 130 140 150 160 220 230 240 250 260 270 pF1KB7 AKLGLKDSQVKIWFQNRRMKWRN-SKEREL-LSSGGCREQTLPTKLNPHPDLSDVGQKGP :.::: ..:::::::::: :... :. :. : . ... . : : : :..... NP_005 AQLGLTQTQVKIWFQNRRSKFKKLYKNGEVPLEHSPNNSDSMACNSPPSPALWDTSSHST 170 180 190 200 210 220 280 290 300 310 pF1KB7 GNEEEEEGPGSPSHRLAYHASSDPQHLRDPR--------LPGP----LPPSPA--HSSSP . . : : : : :: :..: :: : :: ::.:: : .:: NP_005 PAPARSQLP-PP---LPYSAS--PSYLDDPTNSWYHAQNLSGPHLQQQPPQPATLHHASP 230 240 250 260 270 320 330 340 pF1KB7 GKPSDFSDSEEEEEGEEQEEITVS : : . NP_005 GPPPNPGAVY 280 343 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 04:39:07 2016 done: Sun Nov 6 04:39:09 2016 Total Scan time: 9.710 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]