FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB9708, 341 aa 1>>>pF1KB9708 341 - 341 aa - 341 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 12.0530+/-0.000949; mu= -10.6072+/- 0.058 mean_var=477.6041+/-97.632, 0's: 0 Z-trim(119.1): 9 B-trim: 215 in 1/54 Lambda= 0.058687 statistics sampled from 20164 (20172) to 20164 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.846), E-opt: 0.2 (0.62), width: 16 Scan time: 3.300 The best scores are: opt bits E(32554) CCDS31318.1 UTF1 gene_id:8433|Hs108|chr10 ( 341) 2414 217.7 1.1e-56 >>CCDS31318.1 UTF1 gene_id:8433|Hs108|chr10 (341 aa) initn: 2414 init1: 2414 opt: 2414 Z-score: 1131.0 bits: 217.7 E(32554): 1.1e-56 Smith-Waterman score: 2414; 100.0% identity (100.0% similar) in 341 aa overlap (1-341:1-341) 10 20 30 40 50 60 pF1KB9 MLLRPRRPPPLAPPAPPSPASPDPEPRTPGDAPGTPPRRPASPSALGELGLPVSPGSAQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 MLLRPRRPPPLAPPAPPSPASPDPEPRTPGDAPGTPPRRPASPSALGELGLPVSPGSAQR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB9 TPWSARETELLLGTLLQPAVWRALLLDRRQALPTYRRVSAALAQQQVRRTPAQCRRRYKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 TPWSARETELLLGTLLQPAVWRALLLDRRQALPTYRRVSAALAQQQVRRTPAQCRRRYKF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB9 LKDKFREAHGQPPGPFDEQIRKLMGLLGDNGRKRPRRRSPGSGRPQRARRPVPNAHAPAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 LKDKFREAHGQPPGPFDEQIRKLMGLLGDNGRKRPRRRSPGSGRPQRARRPVPNAHAPAP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB9 SEPDATPLPTARDRDADPTWTLRFSPSPPKSADASPAPGSPPAPAPTALATCIPEDRAPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 SEPDATPLPTARDRDADPTWTLRFSPSPPKSADASPAPGSPPAPAPTALATCIPEDRAPV 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB9 RGPGSPPPPPAREDPDSPPGRPEDCAPPPAAPPSLNTALLQTLGHLGDIANILGPLRDQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 RGPGSPPPPPAREDPDSPPGRPEDCAPPPAAPPSLNTALLQTLGHLGDIANILGPLRDQL 250 260 270 280 290 300 310 320 330 340 pF1KB9 LTLNQHVEQLRGAFDQTVSLAVGFILGSAAAERGVLRDPCQ ::::::::::::::::::::::::::::::::::::::::: CCDS31 LTLNQHVEQLRGAFDQTVSLAVGFILGSAAAERGVLRDPCQ 310 320 330 340 341 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 04:27:07 2016 done: Tue Nov 8 04:27:08 2016 Total Scan time: 3.300 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]