FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4078, 412 aa 1>>>pF1KE4078 412 - 412 aa - 412 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.1873+/-0.000815; mu= 12.5219+/- 0.048 mean_var=101.0174+/-21.636, 0's: 0 Z-trim(109.4): 98 B-trim: 0 in 0/51 Lambda= 0.127607 statistics sampled from 10714 (10832) to 10714 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.699), E-opt: 0.2 (0.333), width: 16 Scan time: 3.120 The best scores are: opt bits E(32554) CCDS31271.1 FBXW4 gene_id:6468|Hs108|chr10 ( 412) 2858 536.8 1.4e-152 >>CCDS31271.1 FBXW4 gene_id:6468|Hs108|chr10 (412 aa) initn: 2858 init1: 2858 opt: 2858 Z-score: 2852.6 bits: 536.8 E(32554): 1.4e-152 Smith-Waterman score: 2858; 100.0% identity (100.0% similar) in 412 aa overlap (1-412:1-412) 10 20 30 40 50 60 pF1KE4 MAAAAGEEEEEEEAARESAARPAAGPALWRLPEELLLLICSYLDMRALGRLAQVCRWLRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 MAAAAGEEEEEEEAARESAARPAAGPALWRLPEELLLLICSYLDMRALGRLAQVCRWLRR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 FTSCDLLWRRIARASLNSGFTRLGTDLMTSVPVKERVKVSQNWRLGRCREGILLKWRCSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 FTSCDLLWRRIARASLNSGFTRLGTDLMTSVPVKERVKVSQNWRLGRCREGILLKWRCSQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 MPWMQLEDDSLYISQANFILAYQFRPDGASLNRRPLGVFAGHDEDVCHFVLANSHIVSAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 MPWMQLEDDSLYISQANFILAYQFRPDGASLNRRPLGVFAGHDEDVCHFVLANSHIVSAG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 GDGKIGIHKIHSTFTVKYSAHEQEVNCVDCKGGIIVSGSRDRTAKVWPLASGRLGQCLHT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 GDGKIGIHKIHSTFTVKYSAHEQEVNCVDCKGGIIVSGSRDRTAKVWPLASGRLGQCLHT 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 IQTEDRVWSIAISPLLSSFVTGTACCGHFSPLRIWDLNSGQLMTHLGSDFPPGAGVLDVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 IQTEDRVWSIAISPLLSSFVTGTACCGHFSPLRIWDLNSGQLMTHLGSDFPPGAGVLDVM 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 YESPFTLLSCGYDTYVRYWDLRTSVRKCVMEWEEPHDSTLYCLQTDGNHLLATGSSYYGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 YESPFTLLSCGYDTYVRYWDLRTSVRKCVMEWEEPHDSTLYCLQTDGNHLLATGSSYYGV 310 320 330 340 350 360 370 380 390 400 410 pF1KE4 VRLWDRRQRACLHAFPLTSTPLSSPVYCLRLTTKHLYAALSYNLHVLDFQNP :::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 VRLWDRRQRACLHAFPLTSTPLSSPVYCLRLTTKHLYAALSYNLHVLDFQNP 370 380 390 400 410 412 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 03:58:47 2016 done: Sun Nov 6 03:58:47 2016 Total Scan time: 3.120 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]