FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1841, 357 aa 1>>>pF1KE1841 357 - 357 aa - 357 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.7227+/-0.000999; mu= 14.3032+/- 0.060 mean_var=66.9828+/-13.110, 0's: 0 Z-trim(104.2): 18 B-trim: 3 in 1/49 Lambda= 0.156709 statistics sampled from 7797 (7801) to 7797 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.619), E-opt: 0.2 (0.24), width: 16 Scan time: 2.570 The best scores are: opt bits E(32554) CCDS31219.1 ASCC1 gene_id:51008|Hs108|chr10 ( 357) 2379 546.9 9.9e-156 CCDS55713.1 ASCC1 gene_id:51008|Hs108|chr10 ( 400) 1639 379.6 2.5e-105 >>CCDS31219.1 ASCC1 gene_id:51008|Hs108|chr10 (357 aa) initn: 2379 init1: 2379 opt: 2379 Z-score: 2909.3 bits: 546.9 E(32554): 9.9e-156 Smith-Waterman score: 2379; 100.0% identity (100.0% similar) in 357 aa overlap (1-357:1-357) 10 20 30 40 50 60 pF1KE1 MEVLRPQLIRIDGRNYRKNPVQEQTYQHEEDEEDFYQGSMECADEPCDAYEVEQTPQGFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 MEVLRPQLIRIDGRNYRKNPVQEQTYQHEEDEEDFYQGSMECADEPCDAYEVEQTPQGFR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 STLRAPSLLYKHIVGKRGDTRKKIEMETKTSISIPKPGQDGEIVITGQHRNGVISARTRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 STLRAPSLLYKHIVGKRGDTRKKIEMETKTSISIPKPGQDGEIVITGQHRNGVISARTRI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 DVLLDTFRRKQPFTHFLAFFLNEVEVQEGFLRFQEEVLAKCSMDHGVDSSIFQNPKKLHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 DVLLDTFRRKQPFTHFLAFFLNEVEVQEGFLRFQEEVLAKCSMDHGVDSSIFQNPKKLHL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 TIGMLVLLSEEEIQQTCEMLQQCKEEFINDISGGKPLEVEMAGIEYMNDDPGMVDVLYAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 TIGMLVLLSEEEIQQTCEMLQQCKEEFINDISGGKPLEVEMAGIEYMNDDPGMVDVLYAK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 VHMKDGSNRLQELVDRVLERFQASGLIVKEWNSVKLHATVMNTLFRKDPNAEGRYNLYTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 VHMKDGSNRLQELVDRVLERFQASGLIVKEWNSVKLHATVMNTLFRKDPNAEGRYNLYTA 250 260 270 280 290 300 310 320 330 340 350 pF1KE1 EGKYIFKERESFDGRNILKLFENFYFGSLKLNSIHISQRFTVDSFGNYASCGQIDFS ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 EGKYIFKERESFDGRNILKLFENFYFGSLKLNSIHISQRFTVDSFGNYASCGQIDFS 310 320 330 340 350 >>CCDS55713.1 ASCC1 gene_id:51008|Hs108|chr10 (400 aa) initn: 2113 init1: 1639 opt: 1639 Z-score: 2004.4 bits: 379.6 E(32554): 2.5e-105 Smith-Waterman score: 2059; 91.4% identity (91.7% similar) in 349 aa overlap (1-321:1-349) 10 20 30 40 50 60 pF1KE1 MEVLRPQLIRIDGRNYRKNPVQEQTYQHEEDEEDFYQGSMECADEPCDAYEVEQTPQGFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 MEVLRPQLIRIDGRNYRKNPVQEQTYQHEEDEEDFYQGSMECADEPCDAYEVEQTPQGFR 10 20 30 40 50 60 70 80 90 pF1KE1 STLRAPSLLY----------------------------KHIVGKRGDTRKKIEMETKTSI :::::::::: .::::::::::::::::::::: CCDS55 STLRAPSLLYNLIHLNTSNDCGFQKITLDCQNIYTWKSRHIVGKRGDTRKKIEMETKTSI 70 80 90 100 110 120 100 110 120 130 140 150 pF1KE1 SIPKPGQDGEIVITGQHRNGVISARTRIDVLLDTFRRKQPFTHFLAFFLNEVEVQEGFLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 SIPKPGQDGEIVITGQHRNGVISARTRIDVLLDTFRRKQPFTHFLAFFLNEVEVQEGFLR 130 140 150 160 170 180 160 170 180 190 200 210 pF1KE1 FQEEVLAKCSMDHGVDSSIFQNPKKLHLTIGMLVLLSEEEIQQTCEMLQQCKEEFINDIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 FQEEVLAKCSMDHGVDSSIFQNPKKLHLTIGMLVLLSEEEIQQTCEMLQQCKEEFINDIS 190 200 210 220 230 240 220 230 240 250 260 270 pF1KE1 GGKPLEVEMAGIEYMNDDPGMVDVLYAKVHMKDGSNRLQELVDRVLERFQASGLIVKEWN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 GGKPLEVEMAGIEYMNDDPGMVDVLYAKVHMKDGSNRLQELVDRVLERFQASGLIVKEWN 250 260 270 280 290 300 280 290 300 310 320 330 pF1KE1 SVKLHATVMNTLFRKDPNAEGRYNLYTAEGKYIFKERESFDGRNILKLFENFYFGSLKLN ::::::::::::::::::::::::::::::::::::::::::::::: : CCDS55 SVKLHATVMNTLFRKDPNAEGRYNLYTAEGKYIFKERESFDGRNILKSFALLPRLEYNDA 310 320 330 340 350 360 340 350 pF1KE1 SIHISQRFTVDSFGNYASCGQIDFS CCDS55 ISAHCNLCLPGSSDSPASASQVAGITGVSDAYSQSLPGKS 370 380 390 400 357 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 12:37:31 2016 done: Sun Nov 6 12:37:31 2016 Total Scan time: 2.570 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]