FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB6508, 384 aa 1>>>pF1KB6508 384 - 384 aa - 384 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.4657+/-0.000522; mu= 21.9287+/- 0.033 mean_var=103.3363+/-27.094, 0's: 0 Z-trim(108.5): 689 B-trim: 875 in 1/48 Lambda= 0.126168 statistics sampled from 15780 (16611) to 15780 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.531), E-opt: 0.2 (0.195), width: 16 Scan time: 6.510 The best scores are: opt bits E(85289) NP_005305 (OMIM: 305670) gastrin-releasing peptide ( 384) 2558 477.1 2.9e-134 NP_002502 (OMIM: 162341) neuromedin-B receptor iso ( 390) 1407 267.6 3.4e-71 NP_001718 (OMIM: 300107) bombesin receptor subtype ( 399) 1292 246.7 7e-65 XP_011534148 (OMIM: 162341) PREDICTED: neuromedin- ( 283) 927 180.1 5.7e-45 XP_016866390 (OMIM: 162341) PREDICTED: neuromedin- ( 301) 920 178.8 1.4e-44 NP_001311237 (OMIM: 162341) neuromedin-B receptor ( 242) 885 172.3 1.1e-42 XP_016866391 (OMIM: 162341) PREDICTED: neuromedin- ( 242) 885 172.3 1.1e-42 NP_001311236 (OMIM: 162341) neuromedin-B receptor ( 242) 885 172.3 1.1e-42 NP_001116131 (OMIM: 131244,277580,600155,600501) e ( 442) 627 125.8 2e-28 NP_000106 (OMIM: 131244,277580,600155,600501) endo ( 442) 627 125.8 2e-28 NP_001188326 (OMIM: 131244,277580,600155,600501) e ( 532) 627 125.9 2.2e-28 NP_001948 (OMIM: 131243,157300,616367) endothelin- ( 427) 606 121.9 2.8e-27 NP_003982 (OMIM: 131244,277580,600155,600501) endo ( 436) 602 121.2 4.7e-27 NP_005152 (OMIM: 600052) apelin receptor [Homo sap ( 380) 521 106.4 1.2e-22 NP_004239 (OMIM: 600895) prolactin-releasing pepti ( 370) 520 106.2 1.3e-22 XP_011530312 (OMIM: 162641) PREDICTED: neuropeptid ( 384) 504 103.3 1e-21 XP_005263088 (OMIM: 162641) PREDICTED: neuropeptid ( 384) 504 103.3 1e-21 NP_000900 (OMIM: 162641) neuropeptide Y receptor t ( 384) 504 103.3 1e-21 NP_057624 (OMIM: 605569) probable G-protein couple ( 423) 488 100.4 8.2e-21 NP_000901 (OMIM: 162642) neuropeptide Y receptor t ( 381) 476 98.2 3.5e-20 XP_005263090 (OMIM: 162642) PREDICTED: neuropeptid ( 381) 476 98.2 3.5e-20 XP_005263091 (OMIM: 162642) PREDICTED: neuropeptid ( 381) 476 98.2 3.5e-20 NP_937822 (OMIM: 606925) pyroglutamylated RFamide ( 431) 474 97.9 4.8e-20 NP_001265723 (OMIM: 601790) neuropeptide Y recepto ( 375) 469 96.9 8.4e-20 XP_016871875 (OMIM: 601790) PREDICTED: neuropeptid ( 375) 469 96.9 8.4e-20 XP_016871876 (OMIM: 601790) PREDICTED: neuropeptid ( 375) 469 96.9 8.4e-20 XP_011538239 (OMIM: 601790) PREDICTED: neuropeptid ( 375) 469 96.9 8.4e-20 XP_011538238 (OMIM: 601790) PREDICTED: neuropeptid ( 375) 469 96.9 8.4e-20 NP_005963 (OMIM: 601790) neuropeptide Y receptor t ( 375) 469 96.9 8.4e-20 NP_071429 (OMIM: 607448) neuropeptide FF receptor ( 430) 444 92.4 2.1e-18 NP_056542 (OMIM: 162323) substance-P receptor isof ( 311) 436 90.8 4.8e-18 NP_001049 (OMIM: 162323) substance-P receptor isof ( 407) 436 90.9 5.6e-18 NP_444264 (OMIM: 607449) neuropeptide FF receptor ( 420) 433 90.4 8.4e-18 NP_001138228 (OMIM: 607449) neuropeptide FF recept ( 423) 433 90.4 8.4e-18 NP_004876 (OMIM: 607449) neuropeptide FF receptor ( 522) 433 90.5 9.5e-18 NP_005293 (OMIM: 602583) prosaposin receptor GPR37 ( 613) 431 90.3 1.3e-17 XP_016883135 (OMIM: 244200,607123) PREDICTED: prok ( 384) 427 89.3 1.7e-17 NP_658986 (OMIM: 244200,607123) prokineticin recep ( 384) 427 89.3 1.7e-17 NP_064552 (OMIM: 605108) neuromedin-U receptor 2 [ ( 415) 413 86.8 1e-16 XP_011527461 (OMIM: 244200,607123) PREDICTED: prok ( 348) 410 86.1 1.4e-16 NP_115940 (OMIM: 176400,604161,614837) kiSS-1 rece ( 398) 406 85.5 2.5e-16 NP_620414 (OMIM: 607122) prokineticin receptor 1 [ ( 393) 400 84.4 5.2e-16 NP_001048 (OMIM: 162321) substance-K receptor [Hom ( 398) 396 83.6 8.7e-16 NP_940799 (OMIM: 601898) growth hormone secretagog ( 366) 385 81.6 3.3e-15 NP_150598 (OMIM: 606665) melanopsin isoform 1 [Hom ( 478) 382 81.2 5.6e-15 XP_016872445 (OMIM: 606665) PREDICTED: melanopsin ( 528) 382 81.3 5.9e-15 XP_011535972 (OMIM: 605108) PREDICTED: neuromedin- ( 321) 379 80.4 6.6e-15 NP_001517 (OMIM: 602393) orexin receptor type 2 [H ( 444) 377 80.2 1e-14 XP_016866287 (OMIM: 602393) PREDICTED: orexin rece ( 461) 377 80.3 1e-14 NP_000903 (OMIM: 165196) kappa-type opioid recepto ( 380) 374 79.6 1.4e-14 >>NP_005305 (OMIM: 305670) gastrin-releasing peptide rec (384 aa) initn: 2558 init1: 2558 opt: 2558 Z-score: 2531.4 bits: 477.1 E(85289): 2.9e-134 Smith-Waterman score: 2558; 100.0% identity (100.0% similar) in 384 aa overlap (1-384:1-384) 10 20 30 40 50 60 pF1KB6 MALNDCFLLNLEVDHFMHCNISSHSADLPVNDDWSHPGILYVIPAVYGVIILIGLIGNIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 MALNDCFLLNLEVDHFMHCNISSHSADLPVNDDWSHPGILYVIPAVYGVIILIGLIGNIT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB6 LIKIFCTVKSMRNVPNLFISSLALGDLLLLITCAPVDASRYLADRWLFGRIGCKLIPFIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 LIKIFCTVKSMRNVPNLFISSLALGDLLLLITCAPVDASRYLADRWLFGRIGCKLIPFIQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB6 LTSVGVSVFTLTALSADRYKAIVRPMDIQASHALMKICLKAAFIWIISMLLAIPEAVFSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 LTSVGVSVFTLTALSADRYKAIVRPMDIQASHALMKICLKAAFIWIISMLLAIPEAVFSD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB6 LHPFHEESTNQTFISCAPYPHSNELHPKIHSMASFLVFYVIPLSIISVYYYFIAKNLIQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 LHPFHEESTNQTFISCAPYPHSNELHPKIHSMASFLVFYVIPLSIISVYYYFIAKNLIQS 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB6 AYNLPVEGNIHVKKQIESRKRLAKTVLVFVGLFAFCWLPNHVIYLYRSYHYSEVDTSMLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 AYNLPVEGNIHVKKQIESRKRLAKTVLVFVGLFAFCWLPNHVIYLYRSYHYSEVDTSMLH 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB6 FVTSICARLLAFTNSCVNPFALYLLSKSFRKQFNTQLLCCQPGLIIRSHSTGRSTTCMTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 FVTSICARLLAFTNSCVNPFALYLLSKSFRKQFNTQLLCCQPGLIIRSHSTGRSTTCMTS 310 320 330 340 350 360 370 380 pF1KB6 LKSTNPSVATFSLINGNICHERYV :::::::::::::::::::::::: NP_005 LKSTNPSVATFSLINGNICHERYV 370 380 >>NP_002502 (OMIM: 162341) neuromedin-B receptor isoform (390 aa) initn: 1371 init1: 686 opt: 1407 Z-score: 1399.1 bits: 267.6 E(85289): 3.4e-71 Smith-Waterman score: 1407; 59.3% identity (83.9% similar) in 354 aa overlap (28-377:30-382) 10 20 30 40 50 pF1KB6 MALNDCFLLNLEVDHFMHCNISSHSADLPVNDDWSHPGILY-VIPAVYGVIILIGLIG ::..: . .. :::..: .:: .::.: NP_002 MPSKSLSNLSVTTGANESGSVPEGWERDFLPASDGTTTELVIRCVIPSLYLLIITVGLLG 10 20 30 40 50 60 60 70 80 90 100 110 pF1KB6 NITLIKIFCTVKSMRNVPNLFISSLALGDLLLLITCAPVDASRYLADRWLFGRIGCKLIP :: :.::: : ..::.:::.:::.:: ::::::.::.:::::::. :.:.::..:::::: NP_002 NIMLVKIFITNSAMRSVPNIFISNLAAGDLLLLLTCVPVDASRYFFDEWMFGKVGCKLIP 70 80 90 100 110 120 120 130 140 150 160 170 pF1KB6 FIQLTSVGVSVFTLTALSADRYKAIVRPMDIQASHALMKICLKAAFIWIISMLLAIPEAV :::::::::::::::::::::.::: :::.:.: ::.. :.:: ::..:.:::.:::: NP_002 VIQLTSVGVSVFTLTALSADRYRAIVNPMDMQTSGALLRTCVKAMGIWVVSVLLAVPEAV 130 140 150 160 170 180 180 190 200 210 220 230 pF1KB6 FSDLHPFHEESTNQTFISCAPYPHSNELHPKIHSMASFLVFYVIPLSIISVYYYFIAKNL ::.. . . :..: .: :::...::::::::. :::...:::.:::.::: :::.: NP_002 FSEVARISSLD-NSSFTACIPYPQTDELHPKIHSVLIFLVYFLIPLAIISIYYYHIAKTL 190 200 210 220 230 240 250 260 270 280 290 pF1KB6 IQSAYNLPVEGNIHVKKQIESRKRLAKTVLVFVGLFAFCWLPNHVIYLYRSYHYSEVDTS :.::.::: : : :.:::.:.:::::: :::::: : :::.:::..:.:::..:.:.: : NP_002 IKSAHNLPGEYNEHTKKQMETRKRLAKIVLVFVGCFIFCWFPNHILYMYRSFNYNEIDPS 240 250 260 270 280 290 300 310 320 330 340 350 pF1KB6 MLHFVTSICARLLAFTNSCVNPFALYLLSKSFRKQFNTQLLCCQPGLIIR--SHSTGRST . :..... ::.:.: :::::::::::::.:::..::.:: : . . : :. . :. NP_002 LGHMIVTLVARVLSFGNSCVNPFALYLLSESFRRHFNSQLCCGRKSYQERGTSYLLSSSA 300 310 320 330 340 350 360 370 380 pF1KB6 TCMTSLKSTNPSVATFS-LINGNICHERYV . ::::::. ...: : :.::. NP_002 VRMTSLKSNAKNMVTNSVLLNGHSMKQEMAL 360 370 380 390 >>NP_001718 (OMIM: 300107) bombesin receptor subtype-3 [ (399 aa) initn: 1263 init1: 1047 opt: 1292 Z-score: 1285.8 bits: 246.7 E(85289): 7e-65 Smith-Waterman score: 1292; 58.6% identity (84.4% similar) in 326 aa overlap (22-341:24-349) 10 20 30 40 50 pF1KB6 MALNDCFLLNLEVDHFMHCNISSHSADLPVNDDWS---HPGI--LYVIPAVYGVIILI :: .. .: :: ::: : .: .:.::: . NP_001 MAQRQPHSPNQTLISITNDTESSSSVVSNDNTNKGWSGDNSPGIEALCAIYITYAVIISV 10 20 30 40 50 60 60 70 80 90 100 110 pF1KB6 GLIGNITLIKIFCTVKSMRNVPNLFISSLALGDLLLLITCAPVDASRYLADRWLFGRIGC :..:: :::.: .:::..:::.::.:::.::::::.::.::::..:::. :::::::: NP_001 GILGNAILIKVFFKTKSMQTVPNIFITSLAFGDLLLLLTCVPVDATHYLAEGWLFGRIGC 70 80 90 100 110 120 120 130 140 150 160 170 pF1KB6 KLIPFIQLTSVGVSVFTLTALSADRYKAIVRPMDIQASHALMKICLKAAFIWIISMLLAI :.. ::.:::::::::::: ::::::::.:.:.. : :.:..: :.::. .::.::..:. NP_001 KVLSFIRLTSVGVSVFTLTILSADRYKAVVKPLERQPSNAILKTCVKAGCVWIVSMIFAL 130 140 150 160 170 180 180 190 200 210 220 230 pF1KB6 PEAVFSDLHPFHEESTNQTFISCAPYPHSNELHPKIHSMASFLVFYVIPLSIISVYYYFI :::.::... :.. . :.:: ::. :: :..: .:::. :::::.:::::::::: .: NP_001 PEAIFSNVYTFRDPNKNMTFESCTSYPVSKKLLQEIHSLLCFLVFYIIPLSIISVYYSLI 190 200 210 220 230 240 240 250 260 270 280 290 pF1KB6 AKNLIQSAYNLPVEGNIHVKKQIESRKRLAKTVLVFVGLFAFCWLPNHVIYLYRSY-HYS :..: .:. :.:.: . :..::::::::.:.::::.:.:::.::::::..:::.:. . NP_001 ARTLYKSTLNIPTEEQSHARKQIESRKRIARTVLVLVALFALCWLPNHLLYLYHSFTSQT 250 260 270 280 290 300 300 310 320 330 340 350 pF1KB6 EVDTSMLHFVTSICARLLAFTNSCVNPFALYLLSKSFRKQFNTQLLCCQPGLIIRSHSTG :: : .::. .: .:.:::.:::::::::: :::::.:.:..::.::. NP_001 YVDPSAMHFIFTIFSRVLAFSNSCVNPFALYWLSKSFQKHFKAQLFCCKAERPEPPVADT 310 320 330 340 350 360 360 370 380 pF1KB6 RSTTCMTSLKSTNPSVATFSLINGNICHERYV NP_001 SLTTLAVMGTVPGTGSIQMSEISVTSFTGCSVKQAEDRF 370 380 390 >>XP_011534148 (OMIM: 162341) PREDICTED: neuromedin-B re (283 aa) initn: 899 init1: 686 opt: 927 Z-score: 928.3 bits: 180.1 E(85289): 5.7e-45 Smith-Waterman score: 927; 56.4% identity (82.7% similar) in 243 aa overlap (138-377:34-275) 110 120 130 140 150 160 pF1KB6 FGRIGCKLIPFIQLTSVGVSVFTLTALSADRYKAIVRPMDIQASHALMKICLKAAFIWII ::.::: :::.:.: ::.. :.:: ::.. XP_011 VESLACFETTGEIVNFWTPIFRLDCLIWFRRYRAIVNPMDMQTSGALLRTCVKAMGIWVV 10 20 30 40 50 60 170 180 190 200 210 220 pF1KB6 SMLLAIPEAVFSDLHPFHEESTNQTFISCAPYPHSNELHPKIHSMASFLVFYVIPLSIIS :.:::.::::::.. . . :..: .: :::...::::::::. :::...:::.::: XP_011 SVLLAVPEAVFSEVARISSLD-NSSFTACIPYPQTDELHPKIHSVLIFLVYFLIPLAIIS 70 80 90 100 110 120 230 240 250 260 270 280 pF1KB6 VYYYFIAKNLIQSAYNLPVEGNIHVKKQIESRKRLAKTVLVFVGLFAFCWLPNHVIYLYR .::: :::.::.::.::: : : :.:::.:.:::::: :::::: : :::.:::..:.:: XP_011 IYYYHIAKTLIKSAHNLPGEYNEHTKKQMETRKRLAKIVLVFVGCFIFCWFPNHILYMYR 130 140 150 160 170 180 290 300 310 320 330 340 pF1KB6 SYHYSEVDTSMLHFVTSICARLLAFTNSCVNPFALYLLSKSFRKQFNTQLLCCQPGLIIR :..:.:.: :. :..... ::.:.: :::::::::::::.:::..::.:: : . . : XP_011 SFNYNEIDPSLGHMIVTLVARVLSFGNSCVNPFALYLLSESFRRHFNSQLCCGRKSYQER 190 200 210 220 230 240 350 360 370 380 pF1KB6 --SHSTGRSTTCMTSLKSTNPSVATFS-LINGNICHERYV :. . :.. ::::::. ...: : :.::. XP_011 GTSYLLSSSAVRMTSLKSNAKNMVTNSVLLNGHSMKQEMAL 250 260 270 280 >>XP_016866390 (OMIM: 162341) PREDICTED: neuromedin-B re (301 aa) initn: 892 init1: 686 opt: 920 Z-score: 921.1 bits: 178.8 E(85289): 1.4e-44 Smith-Waterman score: 920; 56.2% identity (82.6% similar) in 242 aa overlap (139-377:53-293) 110 120 130 140 150 160 pF1KB6 GRIGCKLIPFIQLTSVGVSVFTLTALSADRYKAIVRPMDIQASHALMKICLKAAFIWIIS :.::: :::.:.: ::.. :.:: ::..: XP_016 QGAWLSAVRTHRRPEHFGAYAAHGASALCWYRAIVNPMDMQTSGALLRTCVKAMGIWVVS 30 40 50 60 70 80 170 180 190 200 210 220 pF1KB6 MLLAIPEAVFSDLHPFHEESTNQTFISCAPYPHSNELHPKIHSMASFLVFYVIPLSIISV .:::.::::::.. . . :..: .: :::...::::::::. :::...:::.:::. XP_016 VLLAVPEAVFSEVARISSLD-NSSFTACIPYPQTDELHPKIHSVLIFLVYFLIPLAIISI 90 100 110 120 130 140 230 240 250 260 270 280 pF1KB6 YYYFIAKNLIQSAYNLPVEGNIHVKKQIESRKRLAKTVLVFVGLFAFCWLPNHVIYLYRS ::: :::.::.::.::: : : :.:::.:.:::::: :::::: : :::.:::..:.::: XP_016 YYYHIAKTLIKSAHNLPGEYNEHTKKQMETRKRLAKIVLVFVGCFIFCWFPNHILYMYRS 150 160 170 180 190 200 290 300 310 320 330 340 pF1KB6 YHYSEVDTSMLHFVTSICARLLAFTNSCVNPFALYLLSKSFRKQFNTQLLCCQPGLIIR- ..:.:.: :. :..... ::.:.: :::::::::::::.:::..::.:: : . . : XP_016 FNYNEIDPSLGHMIVTLVARVLSFGNSCVNPFALYLLSESFRRHFNSQLCCGRKSYQERG 210 220 230 240 250 260 350 360 370 380 pF1KB6 -SHSTGRSTTCMTSLKSTNPSVATFS-LINGNICHERYV :. . :.. ::::::. ...: : :.::. XP_016 TSYLLSSSAVRMTSLKSNAKNMVTNSVLLNGHSMKQEMAL 270 280 290 300 >>NP_001311237 (OMIM: 162341) neuromedin-B receptor isof (242 aa) initn: 857 init1: 686 opt: 885 Z-score: 887.7 bits: 172.3 E(85289): 1.1e-42 Smith-Waterman score: 885; 55.7% identity (82.6% similar) in 235 aa overlap (146-377:1-234) 120 130 140 150 160 170 pF1KB6 IPFIQLTSVGVSVFTLTALSADRYKAIVRPMDIQASHALMKICLKAAFIWIISMLLAIPE ::.:.: ::.. :.:: ::..:.:::.:: NP_001 MDMQTSGALLRTCVKAMGIWVVSVLLAVPE 10 20 30 180 190 200 210 220 230 pF1KB6 AVFSDLHPFHEESTNQTFISCAPYPHSNELHPKIHSMASFLVFYVIPLSIISVYYYFIAK ::::.. . . :..: .: :::...::::::::. :::...:::.:::.::: ::: NP_001 AVFSEVARISSLD-NSSFTACIPYPQTDELHPKIHSVLIFLVYFLIPLAIISIYYYHIAK 40 50 60 70 80 240 250 260 270 280 290 pF1KB6 NLIQSAYNLPVEGNIHVKKQIESRKRLAKTVLVFVGLFAFCWLPNHVIYLYRSYHYSEVD .::.::.::: : : :.:::.:.:::::: :::::: : :::.:::..:.:::..:.:.: NP_001 TLIKSAHNLPGEYNEHTKKQMETRKRLAKIVLVFVGCFIFCWFPNHILYMYRSFNYNEID 90 100 110 120 130 140 300 310 320 330 340 350 pF1KB6 TSMLHFVTSICARLLAFTNSCVNPFALYLLSKSFRKQFNTQLLCCQPGLIIR--SHSTGR :. :..... ::.:.: :::::::::::::.:::..::.:: : . . : :. . NP_001 PSLGHMIVTLVARVLSFGNSCVNPFALYLLSESFRRHFNSQLCCGRKSYQERGTSYLLSS 150 160 170 180 190 200 360 370 380 pF1KB6 STTCMTSLKSTNPSVATFS-LINGNICHERYV :.. ::::::. ...: : :.::. NP_001 SAVRMTSLKSNAKNMVTNSVLLNGHSMKQEMAL 210 220 230 240 >>XP_016866391 (OMIM: 162341) PREDICTED: neuromedin-B re (242 aa) initn: 857 init1: 686 opt: 885 Z-score: 887.7 bits: 172.3 E(85289): 1.1e-42 Smith-Waterman score: 885; 55.7% identity (82.6% similar) in 235 aa overlap (146-377:1-234) 120 130 140 150 160 170 pF1KB6 IPFIQLTSVGVSVFTLTALSADRYKAIVRPMDIQASHALMKICLKAAFIWIISMLLAIPE ::.:.: ::.. :.:: ::..:.:::.:: XP_016 MDMQTSGALLRTCVKAMGIWVVSVLLAVPE 10 20 30 180 190 200 210 220 230 pF1KB6 AVFSDLHPFHEESTNQTFISCAPYPHSNELHPKIHSMASFLVFYVIPLSIISVYYYFIAK ::::.. . . :..: .: :::...::::::::. :::...:::.:::.::: ::: XP_016 AVFSEVARISSLD-NSSFTACIPYPQTDELHPKIHSVLIFLVYFLIPLAIISIYYYHIAK 40 50 60 70 80 240 250 260 270 280 290 pF1KB6 NLIQSAYNLPVEGNIHVKKQIESRKRLAKTVLVFVGLFAFCWLPNHVIYLYRSYHYSEVD .::.::.::: : : :.:::.:.:::::: :::::: : :::.:::..:.:::..:.:.: XP_016 TLIKSAHNLPGEYNEHTKKQMETRKRLAKIVLVFVGCFIFCWFPNHILYMYRSFNYNEID 90 100 110 120 130 140 300 310 320 330 340 350 pF1KB6 TSMLHFVTSICARLLAFTNSCVNPFALYLLSKSFRKQFNTQLLCCQPGLIIR--SHSTGR :. :..... ::.:.: :::::::::::::.:::..::.:: : . . : :. . XP_016 PSLGHMIVTLVARVLSFGNSCVNPFALYLLSESFRRHFNSQLCCGRKSYQERGTSYLLSS 150 160 170 180 190 200 360 370 380 pF1KB6 STTCMTSLKSTNPSVATFS-LINGNICHERYV :.. ::::::. ...: : :.::. XP_016 SAVRMTSLKSNAKNMVTNSVLLNGHSMKQEMAL 210 220 230 240 >>NP_001311236 (OMIM: 162341) neuromedin-B receptor isof (242 aa) initn: 857 init1: 686 opt: 885 Z-score: 887.7 bits: 172.3 E(85289): 1.1e-42 Smith-Waterman score: 885; 55.7% identity (82.6% similar) in 235 aa overlap (146-377:1-234) 120 130 140 150 160 170 pF1KB6 IPFIQLTSVGVSVFTLTALSADRYKAIVRPMDIQASHALMKICLKAAFIWIISMLLAIPE ::.:.: ::.. :.:: ::..:.:::.:: NP_001 MDMQTSGALLRTCVKAMGIWVVSVLLAVPE 10 20 30 180 190 200 210 220 230 pF1KB6 AVFSDLHPFHEESTNQTFISCAPYPHSNELHPKIHSMASFLVFYVIPLSIISVYYYFIAK ::::.. . . :..: .: :::...::::::::. :::...:::.:::.::: ::: NP_001 AVFSEVARISSLD-NSSFTACIPYPQTDELHPKIHSVLIFLVYFLIPLAIISIYYYHIAK 40 50 60 70 80 240 250 260 270 280 290 pF1KB6 NLIQSAYNLPVEGNIHVKKQIESRKRLAKTVLVFVGLFAFCWLPNHVIYLYRSYHYSEVD .::.::.::: : : :.:::.:.:::::: :::::: : :::.:::..:.:::..:.:.: NP_001 TLIKSAHNLPGEYNEHTKKQMETRKRLAKIVLVFVGCFIFCWFPNHILYMYRSFNYNEID 90 100 110 120 130 140 300 310 320 330 340 350 pF1KB6 TSMLHFVTSICARLLAFTNSCVNPFALYLLSKSFRKQFNTQLLCCQPGLIIR--SHSTGR :. :..... ::.:.: :::::::::::::.:::..::.:: : . . : :. . NP_001 PSLGHMIVTLVARVLSFGNSCVNPFALYLLSESFRRHFNSQLCCGRKSYQERGTSYLLSS 150 160 170 180 190 200 360 370 380 pF1KB6 STTCMTSLKSTNPSVATFS-LINGNICHERYV :.. ::::::. ...: : :.::. NP_001 SAVRMTSLKSNAKNMVTNSVLLNGHSMKQEMAL 210 220 230 240 >>NP_001116131 (OMIM: 131244,277580,600155,600501) endot (442 aa) initn: 555 init1: 384 opt: 627 Z-score: 631.2 bits: 125.8 E(85289): 2e-28 Smith-Waterman score: 627; 32.1% identity (65.9% similar) in 340 aa overlap (41-371:102-433) 20 30 40 50 60 70 pF1KB6 LEVDHFMHCNISSHSADLPVNDDWSHPGILYVIPAVYGVIILIGLIGNITLIKIFCTVKS :. .: .....:.::: ::..:. : NP_001 PKGDRTAGSPPRTISPPPCQGPIEIKETFKYINTVVSCLVFVLGIIGNSTLLRIIYKNKC 80 90 100 110 120 130 80 90 100 110 120 130 pF1KB6 MRNVPNLFISSLALGDLLLLITCAPVDASRYLADRWLFGRIGCKLIPFIQLTSVGVSVFT ::: ::..:.:::::::: .. :... . ::. : :: :::.:::: .:::..:.. NP_001 MRNGPNILIASLALGDLLHIVIDIPINVYKLLAEDWPFGAEMCKLVPFIQKASVGITVLS 140 150 160 170 180 190 140 150 160 170 180 190 pF1KB6 LTALSADRYKAIVRPMDIQASHALMKICLKAAFIWIISMLLAIPEAVFSDLHPFHEESTN : ::: :::.:.. :.. . .. ..::..:..::.:::. :. . ... NP_001 LCALSIDRYRAVASWSRIKGIGVPKWTAVEIVLIWVVSVVLAVPEAIGFDIITMDYKGSY 200 210 220 230 240 250 200 210 220 230 240 pF1KB6 QTFISCAPYPHSNELHPKIHSMAS----FLVFYVIPLSIISVYYYFIAKNLIQSAYNLPV . : .: .. .... :. : .. .::.: . .: ... ..... .. . NP_001 LRI--CLLHPVQKTAFMQFYKTAKDWWLFSFYFCLPLAITAFFYTLMTCEMLRKKSGMQI 260 270 280 290 300 250 260 270 280 290 300 pF1KB6 EGNIHVKKQIESRKRLAKTVLVFVGLFAFCWLPNHVIYLYRSYHYSEVDTS---MLHF-- : :.:. :...::::. .: .::.:::: :. . . :.. : . .: : NP_001 ALNDHLKQ----RREVAKTVFCLVLVFALCWLPLHLSRILKLTLYNQNDPNRCELLSFLL 310 320 330 340 350 360 310 320 330 340 350 360 pF1KB6 VTSICARLLAFTNSCVNPFALYLLSKSFRKQFNTQLLCCQPGLIIRSHSTGRSTTCMTSL : . . .: :::.::.::::.:: :.. :.. ::: . ...: .. .:. .. NP_001 VLDYIGINMASLNSCINPIALYLVSKRFKNCFKS-CLCCWCQSFEEKQSLEEKQSCL-KF 370 380 390 400 410 420 370 380 pF1KB6 KSTNPSVATFSLINGNICHERYV :... . .: NP_001 KANDHGYDNFRSSNKYSSS 430 440 >>NP_000106 (OMIM: 131244,277580,600155,600501) endothel (442 aa) initn: 555 init1: 384 opt: 627 Z-score: 631.2 bits: 125.8 E(85289): 2e-28 Smith-Waterman score: 627; 32.1% identity (65.9% similar) in 340 aa overlap (41-371:102-433) 20 30 40 50 60 70 pF1KB6 LEVDHFMHCNISSHSADLPVNDDWSHPGILYVIPAVYGVIILIGLIGNITLIKIFCTVKS :. .: .....:.::: ::..:. : NP_000 PKGDRTAGSPPRTISPPPCQGPIEIKETFKYINTVVSCLVFVLGIIGNSTLLRIIYKNKC 80 90 100 110 120 130 80 90 100 110 120 130 pF1KB6 MRNVPNLFISSLALGDLLLLITCAPVDASRYLADRWLFGRIGCKLIPFIQLTSVGVSVFT ::: ::..:.:::::::: .. :... . ::. : :: :::.:::: .:::..:.. NP_000 MRNGPNILIASLALGDLLHIVIDIPINVYKLLAEDWPFGAEMCKLVPFIQKASVGITVLS 140 150 160 170 180 190 140 150 160 170 180 190 pF1KB6 LTALSADRYKAIVRPMDIQASHALMKICLKAAFIWIISMLLAIPEAVFSDLHPFHEESTN : ::: :::.:.. :.. . .. ..::..:..::.:::. :. . ... NP_000 LCALSIDRYRAVASWSRIKGIGVPKWTAVEIVLIWVVSVVLAVPEAIGFDIITMDYKGSY 200 210 220 230 240 250 200 210 220 230 240 pF1KB6 QTFISCAPYPHSNELHPKIHSMAS----FLVFYVIPLSIISVYYYFIAKNLIQSAYNLPV . : .: .. .... :. : .. .::.: . .: ... ..... .. . NP_000 LRI--CLLHPVQKTAFMQFYKTAKDWWLFSFYFCLPLAITAFFYTLMTCEMLRKKSGMQI 260 270 280 290 300 250 260 270 280 290 300 pF1KB6 EGNIHVKKQIESRKRLAKTVLVFVGLFAFCWLPNHVIYLYRSYHYSEVDTS---MLHF-- : :.:. :...::::. .: .::.:::: :. . . :.. : . .: : NP_000 ALNDHLKQ----RREVAKTVFCLVLVFALCWLPLHLSRILKLTLYNQNDPNRCELLSFLL 310 320 330 340 350 360 310 320 330 340 350 360 pF1KB6 VTSICARLLAFTNSCVNPFALYLLSKSFRKQFNTQLLCCQPGLIIRSHSTGRSTTCMTSL : . . .: :::.::.::::.:: :.. :.. ::: . ...: .. .:. .. NP_000 VLDYIGINMASLNSCINPIALYLVSKRFKNCFKS-CLCCWCQSFEEKQSLEEKQSCL-KF 370 380 390 400 410 420 370 380 pF1KB6 KSTNPSVATFSLINGNICHERYV :... . .: NP_000 KANDHGYDNFRSSNKYSSS 430 440 384 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 12:51:34 2016 done: Sun Nov 6 12:51:35 2016 Total Scan time: 6.510 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]