FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2074, 737 aa 1>>>pF1KE2074 737 - 737 aa - 737 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.3515+/-0.000908; mu= 11.0153+/- 0.055 mean_var=120.6350+/-24.186, 0's: 0 Z-trim(109.3): 7 B-trim: 0 in 0/51 Lambda= 0.116772 statistics sampled from 10790 (10793) to 10790 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.68), E-opt: 0.2 (0.332), width: 16 Scan time: 3.860 The best scores are: opt bits E(32554) CCDS12747.1 GYS1 gene_id:2997|Hs108|chr19 ( 737) 5013 856.0 0 CCDS54292.1 GYS1 gene_id:2997|Hs108|chr19 ( 673) 3879 664.9 1.1e-190 CCDS8690.1 GYS2 gene_id:2998|Hs108|chr12 ( 703) 3543 608.3 1.3e-173 >>CCDS12747.1 GYS1 gene_id:2997|Hs108|chr19 (737 aa) initn: 5013 init1: 5013 opt: 5013 Z-score: 4568.5 bits: 856.0 E(32554): 0 Smith-Waterman score: 5013; 100.0% identity (100.0% similar) in 737 aa overlap (1-737:1-737) 10 20 30 40 50 60 pF1KE2 MPLNRTLSMSSLPGLEDWEDEFDLENAVLFEVAWEVANKVGGIYTVLQTKAKVTGDEWGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 MPLNRTLSMSSLPGLEDWEDEFDLENAVLFEVAWEVANKVGGIYTVLQTKAKVTGDEWGD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 NYFLVGPYTEQGVRTQVELLEAPTPALKRTLDSMNSKGCKVYFGRWLIEGGPLVVLLDVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 NYFLVGPYTEQGVRTQVELLEAPTPALKRTLDSMNSKGCKVYFGRWLIEGGPLVVLLDVG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 ASAWALERWKGELWDTCNIGVPWYDREANDAVLFGFLTTWFLGEFLAQSEEKPHVVAHFH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 ASAWALERWKGELWDTCNIGVPWYDREANDAVLFGFLTTWFLGEFLAQSEEKPHVVAHFH 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 EWLAGVGLCLCRARRLPVATIFTTHATLLGRYLCAGAVDFYNNLENFNVDKEAGERQIYH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 EWLAGVGLCLCRARRLPVATIFTTHATLLGRYLCAGAVDFYNNLENFNVDKEAGERQIYH 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 RYCMERAAAHCAHVFTTVSQITAIEAQHLLKRKPDIVTPNGLNVKKFSAMHEFQNLHAQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 RYCMERAAAHCAHVFTTVSQITAIEAQHLLKRKPDIVTPNGLNVKKFSAMHEFQNLHAQS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 KARIQEFVRGHFYGHLDFNLDKTLYFFIAGRYEFSNKGADVFLEALARLNYLLRVNGSEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 KARIQEFVRGHFYGHLDFNLDKTLYFFIAGRYEFSNKGADVFLEALARLNYLLRVNGSEQ 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 TVVAFFIMPARTNNFNVETLKGQAVRKQLWDTANTVKEKFGRKLYESLLVGSLPDMNKML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 TVVAFFIMPARTNNFNVETLKGQAVRKQLWDTANTVKEKFGRKLYESLLVGSLPDMNKML 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 DKEDFTMMKRAIFATQRQSFPPVCTHNMLDDSSDPILTTIRRIGLFNSSADRVKVIFHPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 DKEDFTMMKRAIFATQRQSFPPVCTHNMLDDSSDPILTTIRRIGLFNSSADRVKVIFHPE 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 FLSSTSPLLPVDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSISTNLSGFGCFMEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 FLSSTSPLLPVDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSISTNLSGFGCFMEE 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE2 HIADPSAYGIYILDRRFRSLDDSCSQLTSFLYSFCQQSRRQRIIQRNRTERLSDLLDWKY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 HIADPSAYGIYILDRRFRSLDDSCSQLTSFLYSFCQQSRRQRIIQRNRTERLSDLLDWKY 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE2 LGRYYMSARHMALSKAFPEHFTYEPNEADAAQGYRYPRPASVPPSPSLSRHSSPHQSEDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 LGRYYMSARHMALSKAFPEHFTYEPNEADAAQGYRYPRPASVPPSPSLSRHSSPHQSEDE 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE2 EDPRNGPLEEDGERYDEDEEAAKDRRNIRAPEWPRRASCTSSTSGSKRNSVDTATSSSLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 EDPRNGPLEEDGERYDEDEEAAKDRRNIRAPEWPRRASCTSSTSGSKRNSVDTATSSSLS 670 680 690 700 710 720 730 pF1KE2 TPSEPLSPTSSLGEERN ::::::::::::::::: CCDS12 TPSEPLSPTSSLGEERN 730 >>CCDS54292.1 GYS1 gene_id:2997|Hs108|chr19 (673 aa) initn: 3879 init1: 3879 opt: 3879 Z-score: 3536.7 bits: 664.9 E(32554): 1.1e-190 Smith-Waterman score: 4407; 91.3% identity (91.3% similar) in 737 aa overlap (1-737:1-673) 10 20 30 40 50 60 pF1KE2 MPLNRTLSMSSLPGLEDWEDEFDLENAVLFEVAWEVANKVGGIYTVLQTKAKVTGDEWGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 MPLNRTLSMSSLPGLEDWEDEFDLENAVLFEVAWEVANKVGGIYTVLQTKAKVTGDEWGD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 NYFLVGPYTEQGVRTQVELLEAPTPALKRTLDSMNSKGCKVYFGRWLIEGGPLVVLLDVG :::::::::::::::::::::::::::::::::::::::: CCDS54 NYFLVGPYTEQGVRTQVELLEAPTPALKRTLDSMNSKGCK-------------------- 70 80 90 100 130 140 150 160 170 180 pF1KE2 ASAWALERWKGELWDTCNIGVPWYDREANDAVLFGFLTTWFLGEFLAQSEEKPHVVAHFH :::::::::::::::: CCDS54 --------------------------------------------FLAQSEEKPHVVAHFH 110 190 200 210 220 230 240 pF1KE2 EWLAGVGLCLCRARRLPVATIFTTHATLLGRYLCAGAVDFYNNLENFNVDKEAGERQIYH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 EWLAGVGLCLCRARRLPVATIFTTHATLLGRYLCAGAVDFYNNLENFNVDKEAGERQIYH 120 130 140 150 160 170 250 260 270 280 290 300 pF1KE2 RYCMERAAAHCAHVFTTVSQITAIEAQHLLKRKPDIVTPNGLNVKKFSAMHEFQNLHAQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 RYCMERAAAHCAHVFTTVSQITAIEAQHLLKRKPDIVTPNGLNVKKFSAMHEFQNLHAQS 180 190 200 210 220 230 310 320 330 340 350 360 pF1KE2 KARIQEFVRGHFYGHLDFNLDKTLYFFIAGRYEFSNKGADVFLEALARLNYLLRVNGSEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 KARIQEFVRGHFYGHLDFNLDKTLYFFIAGRYEFSNKGADVFLEALARLNYLLRVNGSEQ 240 250 260 270 280 290 370 380 390 400 410 420 pF1KE2 TVVAFFIMPARTNNFNVETLKGQAVRKQLWDTANTVKEKFGRKLYESLLVGSLPDMNKML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 TVVAFFIMPARTNNFNVETLKGQAVRKQLWDTANTVKEKFGRKLYESLLVGSLPDMNKML 300 310 320 330 340 350 430 440 450 460 470 480 pF1KE2 DKEDFTMMKRAIFATQRQSFPPVCTHNMLDDSSDPILTTIRRIGLFNSSADRVKVIFHPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 DKEDFTMMKRAIFATQRQSFPPVCTHNMLDDSSDPILTTIRRIGLFNSSADRVKVIFHPE 360 370 380 390 400 410 490 500 510 520 530 540 pF1KE2 FLSSTSPLLPVDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSISTNLSGFGCFMEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 FLSSTSPLLPVDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSISTNLSGFGCFMEE 420 430 440 450 460 470 550 560 570 580 590 600 pF1KE2 HIADPSAYGIYILDRRFRSLDDSCSQLTSFLYSFCQQSRRQRIIQRNRTERLSDLLDWKY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 HIADPSAYGIYILDRRFRSLDDSCSQLTSFLYSFCQQSRRQRIIQRNRTERLSDLLDWKY 480 490 500 510 520 530 610 620 630 640 650 660 pF1KE2 LGRYYMSARHMALSKAFPEHFTYEPNEADAAQGYRYPRPASVPPSPSLSRHSSPHQSEDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 LGRYYMSARHMALSKAFPEHFTYEPNEADAAQGYRYPRPASVPPSPSLSRHSSPHQSEDE 540 550 560 570 580 590 670 680 690 700 710 720 pF1KE2 EDPRNGPLEEDGERYDEDEEAAKDRRNIRAPEWPRRASCTSSTSGSKRNSVDTATSSSLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 EDPRNGPLEEDGERYDEDEEAAKDRRNIRAPEWPRRASCTSSTSGSKRNSVDTATSSSLS 600 610 620 630 640 650 730 pF1KE2 TPSEPLSPTSSLGEERN ::::::::::::::::: CCDS54 TPSEPLSPTSSLGEERN 660 670 >>CCDS8690.1 GYS2 gene_id:2998|Hs108|chr12 (703 aa) initn: 3534 init1: 2723 opt: 3543 Z-score: 3230.5 bits: 608.3 E(32554): 1.3e-173 Smith-Waterman score: 3543; 72.4% identity (91.7% similar) in 688 aa overlap (5-691:5-684) 10 20 30 40 50 pF1KE2 MPLNRTLSMSSLPGLEDWE-DEFDLENAVLFEVAWEVANKVGGIYTVLQTKAKVTGDEWG :.::..:: :: .:: .:. .:. .::::::::.:::::::::.:::::.:.:::: CCDS86 MLRGRSLSVTSLGGLPQWEVEELPVEELLLFEVAWEVTNKVGGIYTVIQTKAKTTADEWG 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE2 DNYFLVGPYTEQGVRTQVELLEAPTPALKRTLDSMNSKGCKVYFGRWLIEGGPLVVLLDV .::::.::: :....:::: : . :..:..:.::..::.:.::::::::.: :::.:. CCDS86 ENYFLIGPYFEHNMKTQVEQCEPVNDAVRRAVDAMNKHGCQVHFGRWLIEGSPYVVLFDI 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE2 GASAWALERWKGELWDTCNIGVPWYDREANDAVLFGFLTTWFLGEFLAQSEEKPHVVAHF : ::: :.::::.::..:..:.:..:::::: ..:: ::.::: : ... : .:::.: CCDS86 GYSAWNLDRWKGDLWEACSVGIPYHDREANDMLIFGSLTAWFLKEVTDHADGK-YVVAQF 130 140 150 160 170 180 190 200 210 220 230 pF1KE2 HEWLAGVGLCLCRARRLPVATIFTTHATLLGRYLCAGAVDFYNNLENFNVDKEAGERQIY ::: ::.:: : :::.::.:::::::::::::::::. .::::.:..::.:::::::::: CCDS86 HEWQAGIGLILSRARKLPIATIFTTHATLLGRYLCAANIDFYNHLDKFNIDKEAGERQIY 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE2 HRYCMERAAAHCAHVFTTVSQITAIEAQHLLKRKPDIVTPNGLNVKKFSAMHEFQNLHAQ ::::::::..::::::::::.::::::.:.::::::.:::::::::::::.::::::::. CCDS86 HRYCMERASVHCAHVFTTVSEITAIEAEHMLKRKPDVVTPNGLNVKKFSAVHEFQNLHAM 240 250 260 270 280 290 300 310 320 330 340 350 pF1KE2 SKARIQEFVRGHFYGHLDFNLDKTLYFFIAGRYEFSNKGADVFLEALARLNYLLRVNGSE :::::.::::::::::::.:.:::..::::::::::::::.:::.:.:::.:::.. :. CCDS86 YKARIQDFVRGHFYGHLDFDLEKTLFLFIAGRYEFSNKGADIFLESLSRLNFLLRMHKSD 300 310 320 330 340 350 360 370 380 390 400 410 pF1KE2 QTVVAFFIMPARTNNFNVETLKGQAVRKQLWDTANTVKEKFGRKLYESLLVGSLPDMNKM ::..::::::.::::::::::::::::::::.:..::::::.:::..:: : .::.: . CCDS86 ITVMVFFIMPAKTNNFNVETLKGQAVRKQLWDVAHSVKEKFGKKLYDALLRGEIPDLNDI 360 370 380 390 400 410 420 430 440 450 460 470 pF1KE2 LDKEDFTMMKRAIFATQRQSFPPVCTHNMLDDSSDPILTTIRRIGLFNSSADRVKVIFHP ::..:.:.::::::.:::::.::: ::::.:::.::::.:::::::::. .::::::.:: CCDS86 LDRDDLTIMKRAIFSTQRQSLPPVTTHNMIDDSTDPILSTIRRIGLFNNRTDRVKVILHP 420 430 440 450 460 470 480 490 500 510 520 530 pF1KE2 EFLSSTSPLLPVDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSISTNLSGFGCFME :::::::::::.:::::::::::::::::::::::::::::::::::..::::::::::. CCDS86 EFLSSTSPLLPMDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMQ 480 490 500 510 520 530 540 550 560 570 580 590 pF1KE2 EHIADPSAYGIYILDRRFRSLDDSCSQLTSFLYSFCQQSRRQRIIQRNRTERLSDLLDWK ::.:::.::::::.:::::: ::::.:::.:::.::.::::::::::::::::::::::. CCDS86 EHVADPTAYGIYIVDRRFRSPDDSCNQLTKFLYGFCKQSRRQRIIQRNRTERLSDLLDWR 540 550 560 570 580 590 600 610 620 630 640 650 pF1KE2 YLGRYYMSARHMALSKAFPEHFTYEPNEADAAQGYRYPRPASVPPSPSLSRHSSPHQSED ::::::. :::..::.:::..: : . ...:..::::.::::::: :. ::: :: : CCDS86 YLGRYYQHARHLTLSRAFPDKFHVELTSPPTTEGFKYPRPSSVPPSPSGSQASSP-QSSD 600 610 620 630 640 650 660 670 680 690 700 710 pF1KE2 EEDPRNGPLEEDGERYDEDEEAAKDRRNIRAPEWPRRASCTSSTSGSKRNSVDTATSSSL :: : . :::::.::: .:: ::..: CCDS86 VED------EVEDERYDEEEEAERDRLNIKSPFSLSHVPHGKKKLHGEYKN 660 670 680 690 700 720 730 pF1KE2 STPSEPLSPTSSLGEERN 737 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 13:17:14 2016 done: Sun Nov 6 13:17:15 2016 Total Scan time: 3.860 Total Display time: 0.060 Function used was FASTA [36.3.4 Apr, 2011]