FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE9507, 325 aa 1>>>pF1KE9507 325 - 325 aa - 325 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.5954+/-0.00113; mu= 14.2223+/- 0.066 mean_var=244.7591+/-105.257, 0's: 0 Z-trim(103.4): 273 B-trim: 881 in 2/44 Lambda= 0.081979 statistics sampled from 6959 (7417) to 6959 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.576), E-opt: 0.2 (0.228), width: 16 Scan time: 2.070 The best scores are: opt bits E(32554) CCDS11868.1 MC5R gene_id:4161|Hs108|chr18 ( 325) 2154 268.9 3.9e-72 CCDS13449.2 MC3R gene_id:4159|Hs108|chr20 ( 323) 1325 170.9 1.3e-42 CCDS11976.1 MC4R gene_id:4160|Hs108|chr18 ( 332) 1318 170.0 2.3e-42 CCDS11869.1 MC2R gene_id:4158|Hs108|chr18 ( 297) 942 125.5 5.3e-29 CCDS56011.1 MC1R gene_id:4157|Hs108|chr16 ( 317) 921 123.1 3e-28 >>CCDS11868.1 MC5R gene_id:4161|Hs108|chr18 (325 aa) initn: 2154 init1: 2154 opt: 2154 Z-score: 1408.6 bits: 268.9 E(32554): 3.9e-72 Smith-Waterman score: 2154; 100.0% identity (100.0% similar) in 325 aa overlap (1-325:1-325) 10 20 30 40 50 60 pF1KE9 MNSSFHLHFLDLNLNATEGNLSGPNVKNKSSPCEDMGIAVEVFLTLGVISLLENILVIGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 MNSSFHLHFLDLNLNATEGNLSGPNVKNKSSPCEDMGIAVEVFLTLGVISLLENILVIGA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE9 IVKNKNLHSPMYFFVCSLAVADMLVSMSSAWETITIYLLNNKHLVIADAFVRHIDNVFDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 IVKNKNLHSPMYFFVCSLAVADMLVSMSSAWETITIYLLNNKHLVIADAFVRHIDNVFDS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE9 MICISVVASMCSLLAIAVDRYVTIFYALRYHHIMTARRSGAIIAGIWAFCTGCGIVFILY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 MICISVVASMCSLLAIAVDRYVTIFYALRYHHIMTARRSGAIIAGIWAFCTGCGIVFILY 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE9 SESTYVILCLISMFFAMLFLLVSLYIHMFLLARTHVKRIAALPGASSARQRTSMQGAVTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 SESTYVILCLISMFFAMLFLLVSLYIHMFLLARTHVKRIAALPGASSARQRTSMQGAVTV 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE9 TMLLGVFTVCWAPFFLHLTLMLSCPQNLYCSRFMSHFNMYLILIMCNSVMDPLIYAFRSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 TMLLGVFTVCWAPFFLHLTLMLSCPQNLYCSRFMSHFNMYLILIMCNSVMDPLIYAFRSQ 250 260 270 280 290 300 310 320 pF1KE9 EMRKTFKEIICCRGFRIACSFPRRD ::::::::::::::::::::::::: CCDS11 EMRKTFKEIICCRGFRIACSFPRRD 310 320 >>CCDS13449.2 MC3R gene_id:4159|Hs108|chr20 (323 aa) initn: 1280 init1: 891 opt: 1325 Z-score: 878.7 bits: 170.9 E(32554): 1.3e-42 Smith-Waterman score: 1325; 61.2% identity (84.5% similar) in 322 aa overlap (1-317:1-322) 10 20 30 40 50 pF1KE9 MNSSFHLHFLDLNLNATEGNLSGPNVKNKSSP--CEDMGIAVEVFLTLGVISLLENILVI ::.: : .. .: .:..: .:.:: ::.. : ::::.::..::::::::: CCDS13 MNASCCLPSVQPTLPNGSEHLQAPFFSNQSSSAFCEQVFIKPEVFLSLGIVSLLENILVI 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE9 GAIVKNKNLHSPMYFFVCSLAVADMLVSMSSAWETITIYLLNNKHLVIADAFVRHIDNVF :.:.: :::::::::.:::::::::::.:.: ::: : .... .:.. : :..:.::.: CCDS13 LAVVRNGNLHSPMYFFLCSLAVADMLVSVSNALETIMIAIVHSDYLTFEDQFIQHMDNIF 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE9 DSMICISVVASMCSLLAIAVDRYVTIFYALRYHHIMTARRSGAIIAGIWAFCTGCGIVFI :::::::.:::.:.::::::::::::::::::: :::.:.. ..:..::. : ::.::: CCDS13 DSMICISLVASICNLLAIAVDRYVTIFYALRYHSIMTVRKALTLIVAIWVCCGVCGVVFI 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE9 LYSESTYVILCLISMFFAMLFLLVSLYIHMFLLARTHVKRIAALPGASSA--RQRTSMQG .:::: .::.:::.:::::..:. .::.::::.:: ::::::::: :... .:.. :.: CCDS13 VYSESKMVIVCLITMFFAMMLLMGTLYVHMFLFARLHVKRIAALPPADGVAPQQHSCMKG 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE9 AVTVTMLLGVFTVCWAPFFLHLTLMLSCPQNLYCSRFMSHFNMYLILIMCNSVMDPLIYA :::.:.::::: :::::::::.:...:: : :: . .::: ::.:::::::.:::::: CCDS13 AVTITILLGVFIFCWAPFFLHLVLIITCPTNPYCICYTAHFNTYLVLIMCNSVIDPLIYA 250 260 270 280 290 300 300 310 320 pF1KE9 FRSQEMRKTFKEIIC-CRGFRIACSFPRRD ::: :.:.::.::.: : :. . CCDS13 FRSLELRNTFREILCGCNGMNLG 310 320 >>CCDS11976.1 MC4R gene_id:4160|Hs108|chr18 (332 aa) initn: 1297 init1: 1010 opt: 1318 Z-score: 874.1 bits: 170.0 E(32554): 2.3e-42 Smith-Waterman score: 1318; 62.2% identity (84.5% similar) in 328 aa overlap (1-324:9-331) 10 20 30 40 pF1KE9 MNSSFHL---HFLDLNLNATEGNLSGPNVKNKSSPC-EDMGIAVEVFLTLGV :..:.:: :. ::.:. .: . .. : :.. .. :::.:::: CCDS11 MVNSTHRGMHTSLHLWNRSSYRLHSNASESLGKGYS----DGGCYEQLFVSPEVFVTLGV 10 20 30 40 50 50 60 70 80 90 100 pF1KE9 ISLLENILVIGAIVKNKNLHSPMYFFVCSLAVADMLVSMSSAWETITIYLLNNKHLVIAD :::::::::: ::.::::::::::::.:::::::::::.:.. :::.: :::. . :. CCDS11 ISLLENILVIVAIAKNKNLHSPMYFFICSLAVADMLVSVSNGSETIVITLLNSTD-TDAQ 60 70 80 90 100 110 110 120 130 140 150 160 pF1KE9 AFVRHIDNVFDSMICISVVASMCSLLAIAVDRYVTIFYALRYHHIMTARRSGAIIAGIWA .:. .::::.::.:: :..::.::::.:::::: ::::::.::.:::..: : ::. ::: CCDS11 SFTVNIDNVIDSVICSSLLASICSLLSIAVDRYFTIFYALQYHNIMTVKRVGIIISCIWA 120 130 140 150 160 170 170 180 190 200 210 220 pF1KE9 FCTGCGIVFILYSESTYVILCLISMFFAMLFLLVSLYIHMFLLARTHVKRIAALPGASSA :: ::.::.::.:. ::.:::.:::.:: :..:::.::::.:: :.::::.:::... CCDS11 ACTVSGILFIIYSDSSAVIICLITMFFTMLALMASLYVHMFLMARLHIKRIAVLPGTGAI 180 190 200 210 220 230 230 240 250 260 270 280 pF1KE9 RQRTSMQGAVTVTMLLGVFTVCWAPFFLHLTLMLSCPQNLYCSRFMSHFNMYLILIMCNS :: ..:.::.:.:.:.:::.:::::::::: ...::::: :: ::::::.::::::::: CCDS11 RQGANMKGAITLTILIGVFVVCWAPFFLHLIFYISCPQNPYCVCFMSHFNLYLILIMCNS 240 250 260 270 280 290 290 300 310 320 pF1KE9 VMDPLIYAFRSQEMRKTFKEIICCRGFRIACSFPRRD ..::::::.::::.:::::::::: . :.. : CCDS11 IIDPLIYALRSQELRKTFKEIICCYPLGGLCDLSSRY 300 310 320 330 >>CCDS11869.1 MC2R gene_id:4158|Hs108|chr18 (297 aa) initn: 930 init1: 559 opt: 942 Z-score: 634.2 bits: 125.5 E(32554): 5.3e-29 Smith-Waterman score: 942; 46.5% identity (77.8% similar) in 288 aa overlap (25-312:13-293) 10 20 30 40 50 60 pF1KE9 MNSSFHLHFLDLNLNATEGNLSGPNVKNKSSPCEDMGIAVEVFLTLGVISLLENILVIGA :. ..: : . . :.:.:......:::..:. : CCDS11 MKHIINSYENINNTARNNSDCPRVVLPEEIFFTISIVGVLENLIVLLA 10 20 30 40 70 80 90 100 110 120 pF1KE9 IVKNKNLHSPMYFFVCSLAVADMLVSMSSAWETITIYLLNNKHLVIADAFVRHIDNVFDS . :::::..:::::.::::..::: :. . :.: : : : .: .: :...:: CCDS11 VFKNKNLQAPMYFFICSLAISDMLGSLYKILENILIILRNMGYLKPRGSFETTADDIIDS 50 60 70 80 90 100 130 140 150 160 170 180 pF1KE9 MICISVVASMCSLLAIAVDRYVTIFYALRYHHIMTARRSGAIIAGIWAFCTGCGIVFILY .. .:...:. :: .::.:::.:::.::::: :.: ::. .... ::.:::: ::..... CCDS11 LFVLSLLGSIFSLSVIAADRYITIFHALRYHSIVTMRRTVVVLTVIWTFCTGTGITMVIF 110 120 130 140 150 160 190 200 210 220 230 240 pF1KE9 SESTYVILCLISMFFAMLFLLVSLYIHMFLLARTHVKRIAALPGASSARQRTSMQGAVTV :. . ... . :.: :: ... ::.:::::::.:...:..:: :..:.::.:. CCDS11 SHHVPTVITFTSLFPLMLVFILCLYVHMFLLARSHTRKISTLP-------RANMKGAITL 170 180 190 200 210 220 250 260 270 280 290 300 pF1KE9 TMLLGVFTVCWAPFFLHLTLMLSCPQNLYCSRFMSHFNMYLILIMCNSVMDPLIYAFRSQ :.::::: ::::: ::. :: ::.: ::. .:: :.. .:::::.:.::.:::::: CCDS11 TILLGVFIFCWAPFVLHVLLMTFCPSNPYCACYMSLFQVNGMLIMCNAVIDPFIYAFRSP 230 240 250 260 270 280 310 320 pF1KE9 EMRKTFKEIICCRGFRIACSFPRRD :.: .::..: : CCDS11 ELRDAFKKMIFCSRYW 290 >>CCDS56011.1 MC1R gene_id:4157|Hs108|chr16 (317 aa) initn: 904 init1: 563 opt: 921 Z-score: 620.5 bits: 123.1 E(32554): 3e-28 Smith-Waterman score: 921; 45.9% identity (76.9% similar) in 303 aa overlap (13-312:13-315) 10 20 30 40 50 pF1KE9 MNSSFHLHFLDLNLNATEGNLS--GPNVKNKSSPCEDMGIAVEVFLTLGVISLLENILVI .::.: . : ... .. : ...:. .::.::..::.:: ::. CCDS56 MAVQGSQRRLLGSLNSTPTAIPQLGLAANQTGARCLEVSISDGLFLSLGLVSLVENALVV 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE9 GAIVKNKNLHSPMYFFVCSLAVADMLVSMSSAWETITIYLLNNKHLVIADAFVRHIDNVF ..:.::.::::::: :.: ::..:.::: :.. :: .: ::. :: : ....:::. CCDS56 ATIAKNRNLHSPMYCFICCLALSDLLVSGSNVLETAVILLLEAGALVARAAVLQQLDNVI 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE9 DSMICISVVASMCSLLAIAVDRYVTIFYALRYHHIMTARRSGAIIAGIWAFCTGCGIVFI : . : :...:.: : :::::::..:::::::: :.: :. .:.::. . . .:: CCDS56 DVITCSSMLSSLCFLGAIAVDRYISIFYALRYHSIVTLPRARRAVAAIWVASVVFSTLFI 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE9 LYSESTYVILCLISMFFAMLFLLVSLYIHMFLLARTHVKRIAALPGASS-ARQRTSMQGA : . . :.:::. .:.::: :.. ::.::. : :.. :: : . ..: ...:: CCDS56 AYYDHVAVLLCLVVFFLAMLVLMAVLYVHMLARACQHAQGIARLHKRQRPVHQGFGLKGA 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE9 VTVTMLLGVFTVCWAPFFLHLTLMLSCPQNLYCSRFMSHFNMYLILIMCNSVMDPLIYAF ::.:.:::.: .::.::::::::.. ::.. :. ....::..: ::.::...::::::: CCDS56 VTLTILLGIFFLCWGPFFLHLTLIVLCPEHPTCGCIFKNFNLFLALIICNAIIDPLIYAF 250 260 270 280 290 300 300 310 320 pF1KE9 RSQEMRKTFKEIICCRGFRIACSFPRRD .:::.:.:.::.. : CCDS56 HSQELRRTLKEVLTCSW 310 325 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 13:44:10 2016 done: Sun Nov 6 13:44:10 2016 Total Scan time: 2.070 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]