FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1899, 825 aa 1>>>pF1KE1899 825 - 825 aa - 825 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.7366+/-0.000873; mu= 7.1499+/- 0.053 mean_var=230.6349+/-46.877, 0's: 0 Z-trim(115.1): 19 B-trim: 151 in 1/53 Lambda= 0.084452 statistics sampled from 15591 (15608) to 15591 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.793), E-opt: 0.2 (0.479), width: 16 Scan time: 4.320 The best scores are: opt bits E(32554) CCDS10629.1 IL4R gene_id:3566|Hs108|chr16 ( 825) 5819 722.2 8.6e-208 CCDS58441.1 IL4R gene_id:3566|Hs108|chr16 ( 810) 5660 702.9 5.7e-202 >>CCDS10629.1 IL4R gene_id:3566|Hs108|chr16 (825 aa) initn: 5819 init1: 5819 opt: 5819 Z-score: 3844.0 bits: 722.2 E(32554): 8.6e-208 Smith-Waterman score: 5819; 99.9% identity (99.9% similar) in 825 aa overlap (1-825:1-825) 10 20 30 40 50 60 pF1KE1 MGWLCSGLLFPVSCLVLLQVASSGNMKVLQEPTCVSDYMSISTCEWKMNGPTNCSTELRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 MGWLCSGLLFPVSCLVLLQVASSGNMKVLQEPTCVSDYMSISTCEWKMNGPTNCSTELRL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 LYQLVFLLSEAHTCIPENNGGAGCVCHLLMDDVVSADNYTLDLWAGQQLLWKGSFKPSEH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 LYQLVFLLSEAHTCIPENNGGAGCVCHLLMDDVVSADNYTLDLWAGQQLLWKGSFKPSEH 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 VKPRAPGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFRIYNVTYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 VKPRAPGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFRIYNVTYL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 EPSLRIAASTLKSGISYRARVRAWAQCYNTTWSEWSPSTKWHNSYREPFEQHLLLGVSVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 EPSLRIAASTLKSGISYRARVRAWAQCYNTTWSEWSPSTKWHNSYREPFEQHLLLGVSVS 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 CIVILAVCLLCYVSITKIKKEWWDQIPNPARSRLVAIIIQDAQGSQWEKRSRGQEPAKCP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 CIVILAVCLLCYVSITKIKKEWWDQIPNPARSRLVAIIIQDAQGSQWEKRSRGQEPAKCP 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 HWKNCLTKLLPCFLEHNMKRDEDPHKAAKEMPFQGSGKSAWCPVEISKTVLWPESISVVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 HWKNCLTKLLPCFLEHNMKRDEDPHKAAKEMPFQGSGKSAWCPVEISKTVLWPESISVVR 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 CVELFEAPVECEEEEEVEEEKGSFCASPESSRDDFQEGRGGIVARLTESLFLDLLGEENG ::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::: CCDS10 CVELFEAPVECEEEEEVEEEKGSFCASPESSRDDFQEGREGIVARLTESLFLDLLGEENG 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE1 GFCQQDMGESCLLPPSGSTSAHMPWDEFPSAGPKEAPPWGKEQPLHLEPSPPASPTQSPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 GFCQQDMGESCLLPPSGSTSAHMPWDEFPSAGPKEAPPWGKEQPLHLEPSPPASPTQSPD 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE1 NLTCTETPLVIAGNPAYRSFSNSLSQSPCPRELGPDPLLARHLEEVEPEMPCVPQLSEPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 NLTCTETPLVIAGNPAYRSFSNSLSQSPCPRELGPDPLLARHLEEVEPEMPCVPQLSEPT 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE1 TVPQPEPETWEQILRRNVLQHGAAAAPVSAPTSGYQEFVHAVEQGGTQASAVVGLGPPGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 TVPQPEPETWEQILRRNVLQHGAAAAPVSAPTSGYQEFVHAVEQGGTQASAVVGLGPPGE 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE1 AGYKAFSSLLASSAVSPEKCGFGASSGEEGYKPFQDLIPGCPGDPAPVPVPLFTFGLDRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 AGYKAFSSLLASSAVSPEKCGFGASSGEEGYKPFQDLIPGCPGDPAPVPVPLFTFGLDRE 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE1 PPRSPQSSHLPSSSPEHLGLEPGEKVEDMPKPPLPQEQATDPLVDSLGSGIVYSALTCHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 PPRSPQSSHLPSSSPEHLGLEPGEKVEDMPKPPLPQEQATDPLVDSLGSGIVYSALTCHL 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE1 CGHLKQCHGQEDGGQTPVMASPCCGCCCGDRSSPPTTPLRAPDPSPGGVPLEASLCPASL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 CGHLKQCHGQEDGGQTPVMASPCCGCCCGDRSSPPTTPLRAPDPSPGGVPLEASLCPASL 730 740 750 760 770 780 790 800 810 820 pF1KE1 APSGISEKSKSSSSFHPAPGNAQSSSQTPKIVNFVSVGPTYMRVS ::::::::::::::::::::::::::::::::::::::::::::: CCDS10 APSGISEKSKSSSSFHPAPGNAQSSSQTPKIVNFVSVGPTYMRVS 790 800 810 820 >>CCDS58441.1 IL4R gene_id:3566|Hs108|chr16 (810 aa) initn: 5660 init1: 5660 opt: 5660 Z-score: 3739.4 bits: 702.9 E(32554): 5.7e-202 Smith-Waterman score: 5660; 99.9% identity (99.9% similar) in 802 aa overlap (24-825:9-810) 10 20 30 40 50 60 pF1KE1 MGWLCSGLLFPVSCLVLLQVASSGNMKVLQEPTCVSDYMSISTCEWKMNGPTNCSTELRL ::::::::::::::::::::::::::::::::::::: CCDS58 MQKDARREGNMKVLQEPTCVSDYMSISTCEWKMNGPTNCSTELRL 10 20 30 40 70 80 90 100 110 120 pF1KE1 LYQLVFLLSEAHTCIPENNGGAGCVCHLLMDDVVSADNYTLDLWAGQQLLWKGSFKPSEH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 LYQLVFLLSEAHTCIPENNGGAGCVCHLLMDDVVSADNYTLDLWAGQQLLWKGSFKPSEH 50 60 70 80 90 100 130 140 150 160 170 180 pF1KE1 VKPRAPGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFRIYNVTYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 VKPRAPGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFRIYNVTYL 110 120 130 140 150 160 190 200 210 220 230 240 pF1KE1 EPSLRIAASTLKSGISYRARVRAWAQCYNTTWSEWSPSTKWHNSYREPFEQHLLLGVSVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 EPSLRIAASTLKSGISYRARVRAWAQCYNTTWSEWSPSTKWHNSYREPFEQHLLLGVSVS 170 180 190 200 210 220 250 260 270 280 290 300 pF1KE1 CIVILAVCLLCYVSITKIKKEWWDQIPNPARSRLVAIIIQDAQGSQWEKRSRGQEPAKCP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 CIVILAVCLLCYVSITKIKKEWWDQIPNPARSRLVAIIIQDAQGSQWEKRSRGQEPAKCP 230 240 250 260 270 280 310 320 330 340 350 360 pF1KE1 HWKNCLTKLLPCFLEHNMKRDEDPHKAAKEMPFQGSGKSAWCPVEISKTVLWPESISVVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 HWKNCLTKLLPCFLEHNMKRDEDPHKAAKEMPFQGSGKSAWCPVEISKTVLWPESISVVR 290 300 310 320 330 340 370 380 390 400 410 420 pF1KE1 CVELFEAPVECEEEEEVEEEKGSFCASPESSRDDFQEGRGGIVARLTESLFLDLLGEENG ::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::: CCDS58 CVELFEAPVECEEEEEVEEEKGSFCASPESSRDDFQEGREGIVARLTESLFLDLLGEENG 350 360 370 380 390 400 430 440 450 460 470 480 pF1KE1 GFCQQDMGESCLLPPSGSTSAHMPWDEFPSAGPKEAPPWGKEQPLHLEPSPPASPTQSPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 GFCQQDMGESCLLPPSGSTSAHMPWDEFPSAGPKEAPPWGKEQPLHLEPSPPASPTQSPD 410 420 430 440 450 460 490 500 510 520 530 540 pF1KE1 NLTCTETPLVIAGNPAYRSFSNSLSQSPCPRELGPDPLLARHLEEVEPEMPCVPQLSEPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 NLTCTETPLVIAGNPAYRSFSNSLSQSPCPRELGPDPLLARHLEEVEPEMPCVPQLSEPT 470 480 490 500 510 520 550 560 570 580 590 600 pF1KE1 TVPQPEPETWEQILRRNVLQHGAAAAPVSAPTSGYQEFVHAVEQGGTQASAVVGLGPPGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 TVPQPEPETWEQILRRNVLQHGAAAAPVSAPTSGYQEFVHAVEQGGTQASAVVGLGPPGE 530 540 550 560 570 580 610 620 630 640 650 660 pF1KE1 AGYKAFSSLLASSAVSPEKCGFGASSGEEGYKPFQDLIPGCPGDPAPVPVPLFTFGLDRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 AGYKAFSSLLASSAVSPEKCGFGASSGEEGYKPFQDLIPGCPGDPAPVPVPLFTFGLDRE 590 600 610 620 630 640 670 680 690 700 710 720 pF1KE1 PPRSPQSSHLPSSSPEHLGLEPGEKVEDMPKPPLPQEQATDPLVDSLGSGIVYSALTCHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 PPRSPQSSHLPSSSPEHLGLEPGEKVEDMPKPPLPQEQATDPLVDSLGSGIVYSALTCHL 650 660 670 680 690 700 730 740 750 760 770 780 pF1KE1 CGHLKQCHGQEDGGQTPVMASPCCGCCCGDRSSPPTTPLRAPDPSPGGVPLEASLCPASL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 CGHLKQCHGQEDGGQTPVMASPCCGCCCGDRSSPPTTPLRAPDPSPGGVPLEASLCPASL 710 720 730 740 750 760 790 800 810 820 pF1KE1 APSGISEKSKSSSSFHPAPGNAQSSSQTPKIVNFVSVGPTYMRVS ::::::::::::::::::::::::::::::::::::::::::::: CCDS58 APSGISEKSKSSSSFHPAPGNAQSSSQTPKIVNFVSVGPTYMRVS 770 780 790 800 810 825 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 14:06:24 2016 done: Sun Nov 6 14:06:25 2016 Total Scan time: 4.320 Total Display time: 0.030 Function used was FASTA [36.3.4 Apr, 2011]