FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5660, 508 aa 1>>>pF1KE5660 508 - 508 aa - 508 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.1798+/-0.000879; mu= 13.7138+/- 0.053 mean_var=81.6953+/-15.855, 0's: 0 Z-trim(107.7): 20 B-trim: 0 in 0/52 Lambda= 0.141898 statistics sampled from 9709 (9721) to 9709 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.669), E-opt: 0.2 (0.299), width: 16 Scan time: 2.480 The best scores are: opt bits E(32554) CCDS10267.1 EDC3 gene_id:80153|Hs108|chr15 ( 508) 3460 718.2 5.4e-207 >>CCDS10267.1 EDC3 gene_id:80153|Hs108|chr15 (508 aa) initn: 3460 init1: 3460 opt: 3460 Z-score: 3829.7 bits: 718.2 E(32554): 5.4e-207 Smith-Waterman score: 3460; 100.0% identity (100.0% similar) in 508 aa overlap (1-508:1-508) 10 20 30 40 50 60 pF1KE5 MATDWLGSIVSINCGDSLGVYQGRVSAVDQVSQTISLTRPFHNGVKCLVPEVTFRAGDIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 MATDWLGSIVSINCGDSLGVYQGRVSAVDQVSQTISLTRPFHNGVKCLVPEVTFRAGDIT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 ELKILEIPGPGDNQHFGDLHQTELGPSGAGCQVGINQNGTGKFVKKPASSSSAPQNIPKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 ELKILEIPGPGDNQHFGDLHQTELGPSGAGCQVGINQNGTGKFVKKPASSSSAPQNIPKR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 TDVKSQDVAVSPQQQQCSKSYVDRHMESLSQSKSFRRRHNSWSSSSRHPNQATPKKSGLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 TDVKSQDVAVSPQQQQCSKSYVDRHMESLSQSKSFRRRHNSWSSSSRHPNQATPKKSGLK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 NGQMKNKDDECFGDDIEEIPDTDFDFEGNLALFDKAAVFEEIDTYERRSGTRSRGIPNER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 NGQMKNKDDECFGDDIEEIPDTDFDFEGNLALFDKAAVFEEIDTYERRSGTRSRGIPNER 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 PTRYRHDENILESEPIVYRRIIVPHNVSKEFCTDSGLVVPSISYELHKKLLSVAEKHGLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 PTRYRHDENILESEPIVYRRIIVPHNVSKEFCTDSGLVVPSISYELHKKLLSVAEKHGLT 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 LERRLEMTGVCASQMALTLLGGPNRLNPKNVHQRPTVALLCGPHVKGAQGISCGRHLANH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 LERRLEMTGVCASQMALTLLGGPNRLNPKNVHQRPTVALLCGPHVKGAQGISCGRHLANH 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 DVQVILFLPNFVKMLESITNELSLFSKTQGQQVSSLKDLPTSPVDLVINCLDCPENVFLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 DVQVILFLPNFVKMLESITNELSLFSKTQGQQVSSLKDLPTSPVDLVINCLDCPENVFLR 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 DQPWYKAAVAWANQNRAPVLSIDPPVHEVEQGIDAKWSLALGLPLPLGEHAGRIYLCDIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 DQPWYKAAVAWANQNRAPVLSIDPPVHEVEQGIDAKWSLALGLPLPLGEHAGRIYLCDIG 430 440 450 460 470 480 490 500 pF1KE5 IPQQVFQEVGINYHSPFGCKFVIPLHSA :::::::::::::::::::::::::::: CCDS10 IPQQVFQEVGINYHSPFGCKFVIPLHSA 490 500 508 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 05:37:37 2016 done: Tue Nov 8 05:37:37 2016 Total Scan time: 2.480 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]