FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE9433, 515 aa 1>>>pF1KE9433 515 - 515 aa - 515 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.9785+/-0.00104; mu= 10.7446+/- 0.063 mean_var=127.9883+/-31.905, 0's: 0 Z-trim(107.4): 205 B-trim: 1202 in 2/48 Lambda= 0.113368 statistics sampled from 9309 (9577) to 9309 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.648), E-opt: 0.2 (0.294), width: 16 Scan time: 2.510 The best scores are: opt bits E(32554) CCDS10051.1 GPR176 gene_id:11245|Hs108|chr15 ( 515) 3370 562.9 3e-160 CCDS61589.1 GPR176 gene_id:11245|Hs108|chr15 ( 514) 3207 536.3 3.2e-152 CCDS61588.1 GPR176 gene_id:11245|Hs108|chr15 ( 470) 3010 504.0 1.5e-142 CCDS7606.1 PRLHR gene_id:2834|Hs108|chr10 ( 370) 366 71.5 1.9e-12 >>CCDS10051.1 GPR176 gene_id:11245|Hs108|chr15 (515 aa) initn: 3370 init1: 3370 opt: 3370 Z-score: 2990.3 bits: 562.9 E(32554): 3e-160 Smith-Waterman score: 3370; 100.0% identity (100.0% similar) in 515 aa overlap (1-515:1-515) 10 20 30 40 50 60 pF1KE9 MGHNGSWISPNASEPHNASGAEAAGVNRSALGEFGEAQLYRQFTTTVQVVIFIGSLLGNF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 MGHNGSWISPNASEPHNASGAEAAGVNRSALGEFGEAQLYRQFTTTVQVVIFIGSLLGNF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE9 MVLWSTCRTTVFKSVTNRFIKNLACSGICASLVCVPFDIILSTSPHCCWWIYTMLFCKVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 MVLWSTCRTTVFKSVTNRFIKNLACSGICASLVCVPFDIILSTSPHCCWWIYTMLFCKVV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE9 KFLHKVFCSVTILSFPAIALDRYYSVLYPLERKISDAKSRELVMYIWAHAVVASVPVFAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 KFLHKVFCSVTILSFPAIALDRYYSVLYPLERKISDAKSRELVMYIWAHAVVASVPVFAV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE9 TNVADIYATSTCTEVWSNSLGHLVYVLVYNITTVIVPVVVVFLFLILIRRALSASQKKKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 TNVADIYATSTCTEVWSNSLGHLVYVLVYNITTVIVPVVVVFLFLILIRRALSASQKKKV 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE9 IIAALRTPQNTISIPYASQREAELHATLLSMVMVFILCSVPYATLVVYQTVLNVPDTSVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 IIAALRTPQNTISIPYASQREAELHATLLSMVMVFILCSVPYATLVVYQTVLNVPDTSVF 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE9 LLLTAVWLPKVSLLANPVLFLTVNKSVRKCLIGTLVQLHHRYSRRNVVSTGSGMAEASLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 LLLTAVWLPKVSLLANPVLFLTVNKSVRKCLIGTLVQLHHRYSRRNVVSTGSGMAEASLE 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE9 PSIRSGSQLLEMFHIGQQQIFKPTEDEEESEAKYIGSADFQAKEIFSTCLEGEQGPQFAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 PSIRSGSQLLEMFHIGQQQIFKPTEDEEESEAKYIGSADFQAKEIFSTCLEGEQGPQFAP 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE9 SAPPLSTVDSVSQVAPAAPVEPETFPDKYSLQFGFGPFELPPQWLSETRNSKKRLLPPLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 SAPPLSTVDSVSQVAPAAPVEPETFPDKYSLQFGFGPFELPPQWLSETRNSKKRLLPPLG 430 440 450 460 470 480 490 500 510 pF1KE9 NTPEELIQTKVPKVGRVERKMSRNNKVSIFPKVDS ::::::::::::::::::::::::::::::::::: CCDS10 NTPEELIQTKVPKVGRVERKMSRNNKVSIFPKVDS 490 500 510 >>CCDS61589.1 GPR176 gene_id:11245|Hs108|chr15 (514 aa) initn: 3216 init1: 2858 opt: 3207 Z-score: 2846.3 bits: 536.3 E(32554): 3.2e-152 Smith-Waterman score: 3207; 96.1% identity (97.7% similar) in 517 aa overlap (1-515:1-514) 10 20 30 40 50 pF1KE9 MGHNGSWISPNASEPHNASGAEAAGVNRSALGEFGEAQLYRQFTTTVQVVIFIGSLL--G ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : CCDS61 MGHNGSWISPNASEPHNASGAEAAGVNRSALGEFGEAQLYRQFTTTVQVVIFIGSLLEFG 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE9 NFMVLWSTCRTTVFKSVTNRFIKNLACSGICASLVCVPFDIILSTSPHCCWWIYTMLFCK :. : . .. . .. .:::::::::::::::::::::::::::::::::::::::: CCDS61 NMEVTRKLDKSRL-PGI--KFIKNLACSGICASLVCVPFDIILSTSPHCCWWIYTMLFCK 70 80 90 100 110 120 130 140 150 160 170 pF1KE9 VVKFLHKVFCSVTILSFPAIALDRYYSVLYPLERKISDAKSRELVMYIWAHAVVASVPVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 VVKFLHKVFCSVTILSFPAIALDRYYSVLYPLERKISDAKSRELVMYIWAHAVVASVPVF 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE9 AVTNVADIYATSTCTEVWSNSLGHLVYVLVYNITTVIVPVVVVFLFLILIRRALSASQKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 AVTNVADIYATSTCTEVWSNSLGHLVYVLVYNITTVIVPVVVVFLFLILIRRALSASQKK 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE9 KVIIAALRTPQNTISIPYASQREAELHATLLSMVMVFILCSVPYATLVVYQTVLNVPDTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 KVIIAALRTPQNTISIPYASQREAELHATLLSMVMVFILCSVPYATLVVYQTVLNVPDTS 240 250 260 270 280 290 300 310 320 330 340 350 pF1KE9 VFLLLTAVWLPKVSLLANPVLFLTVNKSVRKCLIGTLVQLHHRYSRRNVVSTGSGMAEAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 VFLLLTAVWLPKVSLLANPVLFLTVNKSVRKCLIGTLVQLHHRYSRRNVVSTGSGMAEAS 300 310 320 330 340 350 360 370 380 390 400 410 pF1KE9 LEPSIRSGSQLLEMFHIGQQQIFKPTEDEEESEAKYIGSADFQAKEIFSTCLEGEQGPQF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 LEPSIRSGSQLLEMFHIGQQQIFKPTEDEEESEAKYIGSADFQAKEIFSTCLEGEQGPQF 360 370 380 390 400 410 420 430 440 450 460 470 pF1KE9 APSAPPLSTVDSVSQVAPAAPVEPETFPDKYSLQFGFGPFELPPQWLSETRNSKKRLLPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 APSAPPLSTVDSVSQVAPAAPVEPETFPDKYSLQFGFGPFELPPQWLSETRNSKKRLLPP 420 430 440 450 460 470 480 490 500 510 pF1KE9 LGNTPEELIQTKVPKVGRVERKMSRNNKVSIFPKVDS ::::::::::::::::::::::::::::::::::::: CCDS61 LGNTPEELIQTKVPKVGRVERKMSRNNKVSIFPKVDS 480 490 500 510 >>CCDS61588.1 GPR176 gene_id:11245|Hs108|chr15 (470 aa) initn: 3010 init1: 3010 opt: 3010 Z-score: 2672.7 bits: 504.0 E(32554): 1.5e-142 Smith-Waterman score: 3010; 98.7% identity (99.6% similar) in 466 aa overlap (50-515:5-470) 20 30 40 50 60 70 pF1KE9 GAEAAGVNRSALGEFGEAQLYRQFTTTVQVVIFIGSLLGNFMVLWSTCRTTVFKSVTNRF ...:. ::::::::::::::::::::::: CCDS61 MPAPLLLISRTLGNFMVLWSTCRTTVFKSVTNRF 10 20 30 80 90 100 110 120 130 pF1KE9 IKNLACSGICASLVCVPFDIILSTSPHCCWWIYTMLFCKVVKFLHKVFCSVTILSFPAIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 IKNLACSGICASLVCVPFDIILSTSPHCCWWIYTMLFCKVVKFLHKVFCSVTILSFPAIA 40 50 60 70 80 90 140 150 160 170 180 190 pF1KE9 LDRYYSVLYPLERKISDAKSRELVMYIWAHAVVASVPVFAVTNVADIYATSTCTEVWSNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 LDRYYSVLYPLERKISDAKSRELVMYIWAHAVVASVPVFAVTNVADIYATSTCTEVWSNS 100 110 120 130 140 150 200 210 220 230 240 250 pF1KE9 LGHLVYVLVYNITTVIVPVVVVFLFLILIRRALSASQKKKVIIAALRTPQNTISIPYASQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 LGHLVYVLVYNITTVIVPVVVVFLFLILIRRALSASQKKKVIIAALRTPQNTISIPYASQ 160 170 180 190 200 210 260 270 280 290 300 310 pF1KE9 REAELHATLLSMVMVFILCSVPYATLVVYQTVLNVPDTSVFLLLTAVWLPKVSLLANPVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 REAELHATLLSMVMVFILCSVPYATLVVYQTVLNVPDTSVFLLLTAVWLPKVSLLANPVL 220 230 240 250 260 270 320 330 340 350 360 370 pF1KE9 FLTVNKSVRKCLIGTLVQLHHRYSRRNVVSTGSGMAEASLEPSIRSGSQLLEMFHIGQQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 FLTVNKSVRKCLIGTLVQLHHRYSRRNVVSTGSGMAEASLEPSIRSGSQLLEMFHIGQQQ 280 290 300 310 320 330 380 390 400 410 420 430 pF1KE9 IFKPTEDEEESEAKYIGSADFQAKEIFSTCLEGEQGPQFAPSAPPLSTVDSVSQVAPAAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 IFKPTEDEEESEAKYIGSADFQAKEIFSTCLEGEQGPQFAPSAPPLSTVDSVSQVAPAAP 340 350 360 370 380 390 440 450 460 470 480 490 pF1KE9 VEPETFPDKYSLQFGFGPFELPPQWLSETRNSKKRLLPPLGNTPEELIQTKVPKVGRVER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 VEPETFPDKYSLQFGFGPFELPPQWLSETRNSKKRLLPPLGNTPEELIQTKVPKVGRVER 400 410 420 430 440 450 500 510 pF1KE9 KMSRNNKVSIFPKVDS :::::::::::::::: CCDS61 KMSRNNKVSIFPKVDS 460 470 >>CCDS7606.1 PRLHR gene_id:2834|Hs108|chr10 (370 aa) initn: 255 init1: 131 opt: 366 Z-score: 337.1 bits: 71.5 E(32554): 1.9e-12 Smith-Waterman score: 366; 25.6% identity (56.5% similar) in 336 aa overlap (11-336:27-351) 10 20 30 40 pF1KE9 MGHNGSWISPNASEPHNASGAEAAGVNRSALGEFGEAQLYRQFT : : .:... .::.. :. : :: .:. CCDS76 MASSTTRGPRVSDLFSGLPPAVTTPANQSAEASAGNGSVAGADAPAVTPFQSLQLVHQLK 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE9 TTV----QVVIFIGSLLGNFMVLWSTCRTTVFKSVTNRFIKNLACSGICASLVCVPFDII . .::. .: :.:: ... :. ...::: .: ::: : . .:::. . CCDS76 GLIVLLYSVVVVVG-LVGNCLLVLVIARVRRLHNVTNFLIGNLALSDVLMCTACVPLTLA 70 80 90 100 110 110 120 130 140 150 160 pF1KE9 LSTSPHCCWWIYTMLFCKVVKFLHKVFCSVTILSFPAIALDRYYSVLYPLERKISDAKSR . :. :.. .:..: ::. : :..... .::.::: ...::.:.:: : CCDS76 YAFEPR--GWVFGGGLCHLVFFLQPVTVYVSVFTLTTIAVDRYVVLVHPLRRRISLRLSA 120 130 140 150 160 170 170 180 190 200 210 pF1KE9 ELVMYIWAHAVVASVPVFAVTNVADI--YATSTCTEVW-SNSLGHLVYVLVYNITTVIVP :. ::: ..: ..:. . : ... . . : : : :. . .:. ..: ..: CCDS76 YAVLAIWALSAVLALPAAVHTYHVELKPHDVRLCEEFWGSQERQRQLYAWGLLLVTYLLP 180 190 200 210 220 230 220 230 240 250 260 270 pF1KE9 VVVVFLFLILIRRALSASQKKKVIIAALRTPQNTISIPYASQREAELHATLLSMVMVFIL ..:..: . . :.. ...:. . . : . :. . :. .:.:: . CCDS76 LLVILLSYVRV----SVKLRNRVVPGCVTQSQA----DWDRARRRRTFCLLVVIVVVFAV 240 250 260 270 280 280 290 300 310 320 330 pF1KE9 CSVPYATLVVYQTVL-NVPDTSVFLLLTAV--WLPKVSLLANPVLFLTVNKSVRKCLIGT : .: .. . . . .. : .: :. . :: : :: .. .. : :. : CCDS76 CWLPLHVFNLLRDLDPHAIDPYAFGLVQLLCHWLAMSSACYNPFIYAWLHDSFREELRKL 290 300 310 320 330 340 340 350 360 370 380 390 pF1KE9 LVQLHHRYSRRNVVSTGSGMAEASLEPSIRSGSQLLEMFHIGQQQIFKPTEDEEESEAKY :: CCDS76 LVAWPRKIAPHGQNMTVSVVI 350 360 370 515 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 14:20:16 2016 done: Sun Nov 6 14:20:17 2016 Total Scan time: 2.510 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]