FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1660, 177 aa 1>>>pF1KE1660 177 - 177 aa - 177 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.4646+/-0.000577; mu= 13.2356+/- 0.035 mean_var=81.4845+/-15.787, 0's: 0 Z-trim(114.4): 8 B-trim: 0 in 0/53 Lambda= 0.142081 statistics sampled from 14942 (14950) to 14942 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.809), E-opt: 0.2 (0.459), width: 16 Scan time: 2.130 The best scores are: opt bits E(32554) CCDS9597.1 IL25 gene_id:64806|Hs108|chr14 ( 177) 1285 271.8 1.6e-73 CCDS45086.1 IL25 gene_id:64806|Hs108|chr14 ( 161) 1171 248.4 1.6e-66 >>CCDS9597.1 IL25 gene_id:64806|Hs108|chr14 (177 aa) initn: 1285 init1: 1285 opt: 1285 Z-score: 1433.6 bits: 271.8 E(32554): 1.6e-73 Smith-Waterman score: 1285; 100.0% identity (100.0% similar) in 177 aa overlap (1-177:1-177) 10 20 30 40 50 60 pF1KE1 MRERPRLGEDSSLISLFLQVVAFLAMVMGTHTYSHWPSCCPSKGQDTSEELLRWSTVPVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 MRERPRLGEDSSLISLFLQVVAFLAMVMGTHTYSHWPSCCPSKGQDTSEELLRWSTVPVP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 PLEPARPNRHPESCRASEDGPLNSRAISPWRYELDRDLNRLPQDLYHARCLCPHCVSLQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 PLEPARPNRHPESCRASEDGPLNSRAISPWRYELDRDLNRLPQDLYHARCLCPHCVSLQT 70 80 90 100 110 120 130 140 150 160 170 pF1KE1 GSHMDPRGNSELLYHNQTVFYRRPCHGEKGTHKGYCLERRLYRVSLACVCVRPRVMG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 GSHMDPRGNSELLYHNQTVFYRRPCHGEKGTHKGYCLERRLYRVSLACVCVRPRVMG 130 140 150 160 170 >>CCDS45086.1 IL25 gene_id:64806|Hs108|chr14 (161 aa) initn: 1171 init1: 1171 opt: 1171 Z-score: 1307.9 bits: 248.4 E(32554): 1.6e-66 Smith-Waterman score: 1171; 100.0% identity (100.0% similar) in 159 aa overlap (19-177:3-161) 10 20 30 40 50 60 pF1KE1 MRERPRLGEDSSLISLFLQVVAFLAMVMGTHTYSHWPSCCPSKGQDTSEELLRWSTVPVP :::::::::::::::::::::::::::::::::::::::::: CCDS45 MYQVVAFLAMVMGTHTYSHWPSCCPSKGQDTSEELLRWSTVPVP 10 20 30 40 70 80 90 100 110 120 pF1KE1 PLEPARPNRHPESCRASEDGPLNSRAISPWRYELDRDLNRLPQDLYHARCLCPHCVSLQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 PLEPARPNRHPESCRASEDGPLNSRAISPWRYELDRDLNRLPQDLYHARCLCPHCVSLQT 50 60 70 80 90 100 130 140 150 160 170 pF1KE1 GSHMDPRGNSELLYHNQTVFYRRPCHGEKGTHKGYCLERRLYRVSLACVCVRPRVMG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 GSHMDPRGNSELLYHNQTVFYRRPCHGEKGTHKGYCLERRLYRVSLACVCVRPRVMG 110 120 130 140 150 160 177 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 14:30:19 2016 done: Sun Nov 6 14:30:20 2016 Total Scan time: 2.130 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]