FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1703, 208 aa 1>>>pF1KE1703 208 - 208 aa - 208 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0913+/-0.000312; mu= 14.7590+/- 0.020 mean_var=63.9643+/-12.754, 0's: 0 Z-trim(116.6): 83 B-trim: 0 in 0/59 Lambda= 0.160363 statistics sampled from 27741 (27826) to 27741 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.713), E-opt: 0.2 (0.326), width: 16 Scan time: 6.260 The best scores are: opt bits E(85289) NP_002001 (OMIM: 600921,612961) fibroblast growth ( 208) 1417 336.0 2.7e-92 NP_062825 (OMIM: 605558,615721) fibroblast growth ( 211) 995 238.4 6.6e-63 NP_003859 (OMIM: 300827,309630) fibroblast growth ( 207) 992 237.7 1.1e-62 XP_011533298 (OMIM: 600921,612961) PREDICTED: fibr ( 158) 782 189.0 3.6e-48 NP_004456 (OMIM: 149730,180920,602115) fibroblast ( 208) 422 105.8 5.3e-23 XP_005248321 (OMIM: 149730,180920,602115) PREDICTE ( 208) 422 105.8 5.3e-23 NP_001308874 (OMIM: 601515,609307) fibroblast grow ( 213) 419 105.1 8.7e-23 NP_001308877 (OMIM: 601515,609307) fibroblast grow ( 213) 419 105.1 8.7e-23 NP_787125 (OMIM: 601515,609307) fibroblast growth ( 252) 419 105.1 1e-22 NP_001308876 (OMIM: 601515,609307) fibroblast grow ( 200) 412 103.5 2.6e-22 NP_001308870 (OMIM: 601515,609307) fibroblast grow ( 185) 411 103.2 2.8e-22 NP_001308861 (OMIM: 601515,609307) fibroblast grow ( 184) 410 103.0 3.3e-22 NP_001308865 (OMIM: 601515,609307) fibroblast grow ( 184) 410 103.0 3.3e-22 NP_001308873 (OMIM: 601515,609307) fibroblast grow ( 184) 410 103.0 3.3e-22 NP_001308869 (OMIM: 601515,609307) fibroblast grow ( 187) 410 103.0 3.3e-22 NP_001308862 (OMIM: 601515,609307) fibroblast grow ( 187) 410 103.0 3.3e-22 NP_001308867 (OMIM: 601515,609307) fibroblast grow ( 187) 410 103.0 3.3e-22 NP_004106 (OMIM: 601515,609307) fibroblast growth ( 247) 411 103.3 3.6e-22 NP_065688 (OMIM: 605831) fibroblast growth factor ( 170) 409 102.7 3.6e-22 NP_004455 (OMIM: 165190,190330) fibroblast growth ( 268) 402 101.2 1.6e-21 NP_378668 (OMIM: 300070) fibroblast growth factor ( 192) 391 98.6 7.2e-21 NP_001132970 (OMIM: 300070) fibroblast growth fact ( 199) 391 98.6 7.4e-21 XP_005247284 (OMIM: 601513,617166) PREDICTED: fibr ( 207) 391 98.6 7.6e-21 NP_001132974 (OMIM: 300070) fibroblast growth fact ( 226) 391 98.6 8.2e-21 NP_001132973 (OMIM: 300070) fibroblast growth fact ( 226) 391 98.6 8.2e-21 NP_004105 (OMIM: 300070) fibroblast growth factor ( 245) 391 98.7 8.7e-21 XP_005262456 (OMIM: 300070) PREDICTED: fibroblast ( 255) 391 98.7 9e-21 NP_001132972 (OMIM: 300070) fibroblast growth fact ( 255) 391 98.7 9e-21 XP_006713601 (OMIM: 601513,617166) PREDICTED: fibr ( 178) 385 97.2 1.8e-20 NP_004104 (OMIM: 601513,617166) fibroblast growth ( 181) 385 97.2 1.8e-20 NP_066360 (OMIM: 601513,617166) fibroblast growth ( 243) 385 97.3 2.3e-20 NP_002000 (OMIM: 148180) fibroblast growth factor ( 194) 383 96.7 2.6e-20 NP_004103 (OMIM: 601514) fibroblast growth factor ( 225) 380 96.1 4.8e-20 NP_001290389 (OMIM: 601514) fibroblast growth fact ( 166) 364 92.3 4.8e-19 NP_066276 (OMIM: 134921) fibroblast growth factor ( 208) 350 89.1 5.5e-18 NP_001998 (OMIM: 164980) fibroblast growth factor ( 206) 346 88.2 1e-17 XP_016861368 (OMIM: 601513,617166) PREDICTED: fibr ( 157) 341 87.0 1.8e-17 NP_001308863 (OMIM: 601515,609307) fibroblast grow ( 163) 339 86.5 2.6e-17 NP_001308860 (OMIM: 601515,609307) fibroblast grow ( 163) 339 86.5 2.6e-17 NP_001308875 (OMIM: 601515,609307) fibroblast grow ( 163) 339 86.5 2.6e-17 NP_001308872 (OMIM: 601515,609307) fibroblast grow ( 163) 339 86.5 2.6e-17 NP_001308864 (OMIM: 601515,609307) fibroblast grow ( 163) 339 86.5 2.6e-17 NP_001308878 (OMIM: 601515,609307) fibroblast grow ( 163) 339 86.5 2.6e-17 NP_001308871 (OMIM: 601515,609307) fibroblast grow ( 163) 339 86.5 2.6e-17 NP_005238 (OMIM: 164950,610706) fibroblast growth ( 239) 332 85.0 1.1e-16 NP_001244139 (OMIM: 131220) fibroblast growth fact ( 155) 329 84.2 1.2e-16 NP_001138406 (OMIM: 131220) fibroblast growth fact ( 155) 329 84.2 1.2e-16 NP_001244137 (OMIM: 131220) fibroblast growth fact ( 155) 329 84.2 1.2e-16 NP_001138407 (OMIM: 131220) fibroblast growth fact ( 155) 329 84.2 1.2e-16 NP_001244138 (OMIM: 131220) fibroblast growth fact ( 155) 329 84.2 1.2e-16 >>NP_002001 (OMIM: 600921,612961) fibroblast growth fact (208 aa) initn: 1417 init1: 1417 opt: 1417 Z-score: 1778.0 bits: 336.0 E(85289): 2.7e-92 Smith-Waterman score: 1417; 100.0% identity (100.0% similar) in 208 aa overlap (1-208:1-208) 10 20 30 40 50 60 pF1KE1 MAPLGEVGNYFGVQDAVPFGNVPVLPVDSPVLLSDHLGQSEAGGLPRGPAVTDLDHLKGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 MAPLGEVGNYFGVQDAVPFGNVPVLPVDSPVLLSDHLGQSEAGGLPRGPAVTDLDHLKGI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 LRRRQLYCRTGFHLEIFPNGTIQGTRKDHSRFGILEFISIAVGLVSIRGVDSGLYLGMNE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 LRRRQLYCRTGFHLEIFPNGTIQGTRKDHSRFGILEFISIAVGLVSIRGVDSGLYLGMNE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 KGELYGSEKLTQECVFREQFEENWYNTYSSNLYKHVDTGRRYYVALNKDGTPREGTRTKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 KGELYGSEKLTQECVFREQFEENWYNTYSSNLYKHVDTGRRYYVALNKDGTPREGTRTKR 130 140 150 160 170 180 190 200 pF1KE1 HQKFTHFLPRPVDPDKVPELYKDILSQS :::::::::::::::::::::::::::: NP_002 HQKFTHFLPRPVDPDKVPELYKDILSQS 190 200 >>NP_062825 (OMIM: 605558,615721) fibroblast growth fact (211 aa) initn: 996 init1: 951 opt: 995 Z-score: 1250.3 bits: 238.4 E(85289): 6.6e-63 Smith-Waterman score: 995; 70.3% identity (89.5% similar) in 209 aa overlap (1-205:1-208) 10 20 30 40 50 pF1KE1 MAPLGEVGNYFGVQDAV--PFGNVPVLPV--DSPVLLSDHLGQSEAGGLPRGPAVTDLDH ::::.:::...: ... :. .:: . : ::... . .: .. ::....: : NP_062 MAPLAEVGGFLGGLEGLGQQVGSHFLLPPAGERPPLLGERRSAAERSARG-GPGAAQLAH 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 LKGILRRRQLYCRTGFHLEIFPNGTIQGTRKDHSRFGILEFISIAVGLVSIRGVDSGLYL :.::::::::::::::::.:.:.:..::::.::: ::::::::.:::::::::::::::: NP_062 LHGILRRRQLYCRTGFHLQILPDGSVQGTRQDHSLFGILEFISVAVGLVSIRGVDSGLYL 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE1 GMNEKGELYGSEKLTQECVFREQFEENWYNTYSSNLYKHVDTGRRYYVALNKDGTPREGT :::.:::::::::::.::.::::::::::::::::.::: ::::::.::::::::::.:. NP_062 GMNDKGELYGSEKLTSECIFREQFEENWYNTYSSNIYKHGDTGRRYFVALNKDGTPRDGA 120 130 140 150 160 170 180 190 200 pF1KE1 RTKRHQKFTHFLPRPVDPDKVPELYKDILSQS :.::::::::::::::::..:::::::.: NP_062 RSKRHQKFTHFLPRPVDPERVPELYKDLLMYT 180 190 200 210 >>NP_003859 (OMIM: 300827,309630) fibroblast growth fact (207 aa) initn: 969 init1: 915 opt: 992 Z-score: 1246.7 bits: 237.7 E(85289): 1.1e-62 Smith-Waterman score: 992; 71.6% identity (87.5% similar) in 208 aa overlap (4-205:1-204) 10 20 30 40 50 pF1KE1 MAPLGEVGNYFGVQD------AVPFGNVPVLPVDSPVLLSDHLGQSEAGGLPRGPAVTDL ..:::. :. : . .::::. .::: .:...::: : : : :: . ::. NP_003 MAEVGGVFASLDWDLHGFSSSLGNVPL--ADSPGFLNERLGQIE-GKLQRG-SPTDF 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 DHLKGILRRRQLYCRTGFHLEIFPNGTIQGTRKDHSRFGILEFISIAVGLVSIRGVDSGL ::::::::::::::::::::::::::..:::.::::::::::::.::::.::::::::: NP_003 AHLKGILRRRQLYCRTGFHLEIFPNGTVHGTRHDHSRFGILEFISLAVGLISIRGVDSGL 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE1 YLGMNEKGELYGSEKLTQECVFREQFEENWYNTYSSNLYKHVDTGRRYYVALNKDGTPRE ::::::.::::::.:::.::::::::::::::::.:.:::: :. :.:::::::::.::: NP_003 YLGMNERGELYGSKKLTRECVFREQFEENWYNTYASTLYKHSDSERQYYVALNKDGSPRE 120 130 140 150 160 170 180 190 200 pF1KE1 GTRTKRHQKFTHFLPRPVDPDKVPELYKDILSQS : ::::::::::::::::::.:.: . .:.. NP_003 GYRTKRHQKFTHFLPRPVDPSKLPSMSRDLFHYR 180 190 200 >>XP_011533298 (OMIM: 600921,612961) PREDICTED: fibrobla (158 aa) initn: 780 init1: 780 opt: 782 Z-score: 985.8 bits: 189.0 E(85289): 3.6e-48 Smith-Waterman score: 782; 89.0% identity (92.6% similar) in 136 aa overlap (78-208:23-158) 50 60 70 80 90 100 pF1KE1 GPAVTDLDHLKGILRRRQLYCRTGFHLEIFPNG---TIQGTRKDHS--RFGILEFISIAV : : ...: . :: .:::::::::: XP_011 MRTAAGYSGSIETVKQKARPLTPRGQRKVLSGKWHLHSLDALGILEFISIAV 10 20 30 40 50 110 120 130 140 150 160 pF1KE1 GLVSIRGVDSGLYLGMNEKGELYGSEKLTQECVFREQFEENWYNTYSSNLYKHVDTGRRY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 GLVSIRGVDSGLYLGMNEKGELYGSEKLTQECVFREQFEENWYNTYSSNLYKHVDTGRRY 60 70 80 90 100 110 170 180 190 200 pF1KE1 YVALNKDGTPREGTRTKRHQKFTHFLPRPVDPDKVPELYKDILSQS :::::::::::::::::::::::::::::::::::::::::::::: XP_011 YVALNKDGTPREGTRTKRHQKFTHFLPRPVDPDKVPELYKDILSQS 120 130 140 150 >>NP_004456 (OMIM: 149730,180920,602115) fibroblast grow (208 aa) initn: 419 init1: 311 opt: 422 Z-score: 533.9 bits: 105.8 E(85289): 5.3e-23 Smith-Waterman score: 422; 43.0% identity (79.6% similar) in 142 aa overlap (48-189:64-203) 20 30 40 50 60 70 pF1KE1 PFGNVPVLPVDSPVLLSDHLGQSEAGGLPRGPAVTDLDHLKGILRRRQLYCRTGFHLEIF : : . .::.: .: :.:. : . :.: NP_004 PVTCQALGQDMVSPEATNSSSSSFSSPSSAGRHVRSYNHLQGDVRWRKLFSFTKYFLKIE 40 50 60 70 80 90 80 90 100 110 120 130 pF1KE1 PNGTIQGTRKDHSRFGILEFISIAVGLVSIRGVDSGLYLGMNEKGELYGSEKLTQECVFR :: ..::.:.. ..:::. :. .:.:......:. ::.::.::.::::......: .. NP_004 KNGKVSGTKKENCPYSILEITSVEIGVVAVKAINSNYYLAMNKKGKLYGSKEFNNDCKLK 100 110 120 130 140 150 140 150 160 170 180 190 pF1KE1 EQFEENWYNTYSSNLYKHVDTGRRYYVALNKDGTPREGTRTKRHQKFTHFLPRPVDPDKV :..::: ::::.: ..: .::..::::: :.::.: .:.:.. .:::: NP_004 ERIEENGYNTYASFNWQH--NGRQMYVALNGKGAPRRGQKTRRKNTSAHFLPMVVHS 160 170 180 190 200 200 pF1KE1 PELYKDILSQS >>XP_005248321 (OMIM: 149730,180920,602115) PREDICTED: f (208 aa) initn: 419 init1: 311 opt: 422 Z-score: 533.9 bits: 105.8 E(85289): 5.3e-23 Smith-Waterman score: 422; 43.0% identity (79.6% similar) in 142 aa overlap (48-189:64-203) 20 30 40 50 60 70 pF1KE1 PFGNVPVLPVDSPVLLSDHLGQSEAGGLPRGPAVTDLDHLKGILRRRQLYCRTGFHLEIF : : . .::.: .: :.:. : . :.: XP_005 PVTCQALGQDMVSPEATNSSSSSFSSPSSAGRHVRSYNHLQGDVRWRKLFSFTKYFLKIE 40 50 60 70 80 90 80 90 100 110 120 130 pF1KE1 PNGTIQGTRKDHSRFGILEFISIAVGLVSIRGVDSGLYLGMNEKGELYGSEKLTQECVFR :: ..::.:.. ..:::. :. .:.:......:. ::.::.::.::::......: .. XP_005 KNGKVSGTKKENCPYSILEITSVEIGVVAVKAINSNYYLAMNKKGKLYGSKEFNNDCKLK 100 110 120 130 140 150 140 150 160 170 180 190 pF1KE1 EQFEENWYNTYSSNLYKHVDTGRRYYVALNKDGTPREGTRTKRHQKFTHFLPRPVDPDKV :..::: ::::.: ..: .::..::::: :.::.: .:.:.. .:::: XP_005 ERIEENGYNTYASFNWQH--NGRQMYVALNGKGAPRRGQKTRRKNTSAHFLPMVVHS 160 170 180 190 200 200 pF1KE1 PELYKDILSQS >>NP_001308874 (OMIM: 601515,609307) fibroblast growth f (213 aa) initn: 430 init1: 392 opt: 419 Z-score: 530.0 bits: 105.1 E(85289): 8.7e-23 Smith-Waterman score: 419; 40.3% identity (73.0% similar) in 159 aa overlap (36-193:13-168) 10 20 30 40 50 60 pF1KE1 EVGNYFGVQDAVPFGNVPVLPVDSPVLLSDHLGQSEAG-GLPRGPAVTDLDHLKGILRRR :. : : .: .. :: .::::. : NP_001 MWFLWNIFSKGTHMLQCLCGKSLKKNKNPTD-PQLKGIVTR- 10 20 30 40 70 80 90 100 110 120 pF1KE1 QLYCRTGFHLEIFPNGTIQGTRKDHSRFGILEFISIAVGLVSIRGVDSGLYLGMNEKGEL :::: :..:.. :.:...::. : . ....: ... .:.:.:: .:::..:: .: : NP_001 -LYCRQGYYLQMHPDGALDGTKDDSTNSTLFNLIPVGLRVVAIQGVKTGLYIAMNGEGYL 50 60 70 80 90 130 140 150 160 170 180 pF1KE1 YGSEKLTQECVFREQFEENWYNTYSSNLYKHVDTGRRYYVALNKDGTPREGTRTKRHQKF : :: .: :: :.:. ::.: ::: ::.. ..:: ....:::.: .:.:.:. . NP_001 YPSELFTPECKFKESVFENYYVIYSSMLYRQQESGRAWFLGLNKEGQAMKGNRVKKTKPA 100 110 120 130 140 150 190 200 pF1KE1 THFLPRPVDPDKVPELYKDILSQS .::::.:.. NP_001 AHFLPKPLEVAMYREPSLHDVGETVPKPGVTPSKSTSASAIMNGGKPVNKSKTT 160 170 180 190 200 210 >>NP_001308877 (OMIM: 601515,609307) fibroblast growth f (213 aa) initn: 430 init1: 392 opt: 419 Z-score: 530.0 bits: 105.1 E(85289): 8.7e-23 Smith-Waterman score: 419; 40.3% identity (73.0% similar) in 159 aa overlap (36-193:13-168) 10 20 30 40 50 60 pF1KE1 EVGNYFGVQDAVPFGNVPVLPVDSPVLLSDHLGQSEAG-GLPRGPAVTDLDHLKGILRRR :. : : .: .. :: .::::. : NP_001 MWFLWNIFSKGTHMLQCLCGKSLKKNKNPTD-PQLKGIVTR- 10 20 30 40 70 80 90 100 110 120 pF1KE1 QLYCRTGFHLEIFPNGTIQGTRKDHSRFGILEFISIAVGLVSIRGVDSGLYLGMNEKGEL :::: :..:.. :.:...::. : . ....: ... .:.:.:: .:::..:: .: : NP_001 -LYCRQGYYLQMHPDGALDGTKDDSTNSTLFNLIPVGLRVVAIQGVKTGLYIAMNGEGYL 50 60 70 80 90 130 140 150 160 170 180 pF1KE1 YGSEKLTQECVFREQFEENWYNTYSSNLYKHVDTGRRYYVALNKDGTPREGTRTKRHQKF : :: .: :: :.:. ::.: ::: ::.. ..:: ....:::.: .:.:.:. . NP_001 YPSELFTPECKFKESVFENYYVIYSSMLYRQQESGRAWFLGLNKEGQAMKGNRVKKTKPA 100 110 120 130 140 150 190 200 pF1KE1 THFLPRPVDPDKVPELYKDILSQS .::::.:.. NP_001 AHFLPKPLEVAMYREPSLHDVGETVPKPGVTPSKSTSASAIMNGGKPVNKSKTT 160 170 180 190 200 210 >>NP_787125 (OMIM: 601515,609307) fibroblast growth fact (252 aa) initn: 430 init1: 392 opt: 419 Z-score: 529.0 bits: 105.1 E(85289): 1e-22 Smith-Waterman score: 419; 40.3% identity (73.0% similar) in 159 aa overlap (36-193:52-207) 10 20 30 40 50 60 pF1KE1 EVGNYFGVQDAVPFGNVPVLPVDSPVLLSDHLGQSEAG-GLPRGPAVTDLDHLKGILRRR :. : : .: .. :: .::::. : NP_787 DLFFLRVSKLLDCFSPKSMWFLWNIFSKGTHMLQCLCGKSLKKNKNPTD-PQLKGIVTR- 30 40 50 60 70 70 80 90 100 110 120 pF1KE1 QLYCRTGFHLEIFPNGTIQGTRKDHSRFGILEFISIAVGLVSIRGVDSGLYLGMNEKGEL :::: :..:.. :.:...::. : . ....: ... .:.:.:: .:::..:: .: : NP_787 -LYCRQGYYLQMHPDGALDGTKDDSTNSTLFNLIPVGLRVVAIQGVKTGLYIAMNGEGYL 80 90 100 110 120 130 130 140 150 160 170 180 pF1KE1 YGSEKLTQECVFREQFEENWYNTYSSNLYKHVDTGRRYYVALNKDGTPREGTRTKRHQKF : :: .: :: :.:. ::.: ::: ::.. ..:: ....:::.: .:.:.:. . NP_787 YPSELFTPECKFKESVFENYYVIYSSMLYRQQESGRAWFLGLNKEGQAMKGNRVKKTKPA 140 150 160 170 180 190 190 200 pF1KE1 THFLPRPVDPDKVPELYKDILSQS .::::.:.. NP_787 AHFLPKPLEVAMYREPSLHDVGETVPKPGVTPSKSTSASAIMNGGKPVNKSKTT 200 210 220 230 240 250 >>NP_001308876 (OMIM: 601515,609307) fibroblast growth f (200 aa) initn: 430 init1: 392 opt: 412 Z-score: 521.7 bits: 103.5 E(85289): 2.6e-22 Smith-Waterman score: 412; 40.9% identity (74.5% similar) in 149 aa overlap (45-193:10-155) 20 30 40 50 60 70 pF1KE1 DAVPFGNVPVLPVDSPVLLSDHLGQSEAGGLPRGPAVTDLDHLKGILRRRQLYCRTGFHL : .. :: .::::. : :::: :..: NP_001 MLQCLCGKSLKKNKNPTD-PQLKGIVTR--LYCRQGYYL 10 20 30 80 90 100 110 120 130 pF1KE1 EIFPNGTIQGTRKDHSRFGILEFISIAVGLVSIRGVDSGLYLGMNEKGELYGSEKLTQEC .. :.:...::. : . ....: ... .:.:.:: .:::..:: .: :: :: .: :: NP_001 QMHPDGALDGTKDDSTNSTLFNLIPVGLRVVAIQGVKTGLYIAMNGEGYLYPSELFTPEC 40 50 60 70 80 90 140 150 160 170 180 190 pF1KE1 VFREQFEENWYNTYSSNLYKHVDTGRRYYVALNKDGTPREGTRTKRHQKFTHFLPRPVDP :.:. ::.: ::: ::.. ..:: ....:::.: .:.:.:. . .::::.:.. NP_001 KFKESVFENYYVIYSSMLYRQQESGRAWFLGLNKEGQAMKGNRVKKTKPAAHFLPKPLEV 100 110 120 130 140 150 200 pF1KE1 DKVPELYKDILSQS NP_001 AMYREPSLHDVGETVPKPGVTPSKSTSASAIMNGGKPVNKSKTT 160 170 180 190 200 208 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 14:40:16 2016 done: Sun Nov 6 14:40:17 2016 Total Scan time: 6.260 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]