FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4158, 532 aa 1>>>pF1KE4158 532 - 532 aa - 532 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.9566+/-0.000995; mu= 10.0513+/- 0.059 mean_var=109.4787+/-23.287, 0's: 0 Z-trim(106.1): 85 B-trim: 0 in 0/51 Lambda= 0.122577 statistics sampled from 8737 (8816) to 8737 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.637), E-opt: 0.2 (0.271), width: 16 Scan time: 3.120 The best scores are: opt bits E(32554) CCDS44988.1 FBXW8 gene_id:26259|Hs108|chr12 ( 532) 3614 650.4 1.5e-186 CCDS9182.1 FBXW8 gene_id:26259|Hs108|chr12 ( 598) 3344 602.7 3.8e-172 >>CCDS44988.1 FBXW8 gene_id:26259|Hs108|chr12 (532 aa) initn: 3614 init1: 3614 opt: 3614 Z-score: 3462.9 bits: 650.4 E(32554): 1.5e-186 Smith-Waterman score: 3614; 99.8% identity (100.0% similar) in 532 aa overlap (1-532:1-532) 10 20 30 40 50 60 pF1KE4 MDDYSLDEFRRRWQEELAQAQAPKKRRRPEAAERRARRPENEMNDVPFFDIQLPYELAIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 MDDYSLDEFRRRWQEELAQAQAPKKRRRPEAAERRARRPENEMNDVPFFDIQLPYELAIN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 IFQYLDRKELGRCAQVSKTWKVIAEDEVLWYRLCQQEGHLPDSSISDYSCWKLIFQECRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 IFQYLDRKELGRCAQVSKTWKVIAEDEVLWYRLCQQEGHLPDSSISDYSCWKLIFQECRA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 KEHMLQTNWKNRKGAVSELEHVPDTVLCDVHSHDGVVIAGYTSGDVRVWDTRTWDYVAPF :::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 KEHMLRTNWKNRKGAVSELEHVPDTVLCDVHSHDGVVIAGYTSGDVRVWDTRTWDYVAPF 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 LESEDEEDEPGMQPNVSFVRINSSLAVAAYEDGFLNIWDLRTGKYPVHRFEHDARIQALA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 LESEDEEDEPGMQPNVSFVRINSSLAVAAYEDGFLNIWDLRTGKYPVHRFEHDARIQALA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 LSQDDATVATASAFDVVMLSPNEEGYWQIAAEFEVPKLVQYLEIVPETRRYPVAVAAAGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 LSQDDATVATASAFDVVMLSPNEEGYWQIAAEFEVPKLVQYLEIVPETRRYPVAVAAAGD 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 LMYLLKAEDSARTLLYAHGPPVTCLDVSANQVAFGVQGLGWVYEGSKILVYSLEAGRRLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 LMYLLKAEDSARTLLYAHGPPVTCLDVSANQVAFGVQGLGWVYEGSKILVYSLEAGRRLL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 KLGNVLRDFTCVNLSDSPPNLMVSGNMDGRVRIHDLRSGNIALSLSAHQLRVSAVQMDDW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 KLGNVLRDFTCVNLSDSPPNLMVSGNMDGRVRIHDLRSGNIALSLSAHQLRVSAVQMDDW 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE4 KIVSGGEEGLVSVWDYRMNQKLWEVYSGHPVQHISFSSHSLITANVPYQTVMRNADLDSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 KIVSGGEEGLVSVWDYRMNQKLWEVYSGHPVQHISFSSHSLITANVPYQTVMRNADLDSF 430 440 450 460 470 480 490 500 510 520 530 pF1KE4 TTHRRHRGLIRAYEFAVDQLAFQSPLPVCRSSCDAMATHYYDLALAFPYNHV :::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 TTHRRHRGLIRAYEFAVDQLAFQSPLPVCRSSCDAMATHYYDLALAFPYNHV 490 500 510 520 530 >>CCDS9182.1 FBXW8 gene_id:26259|Hs108|chr12 (598 aa) initn: 3341 init1: 3341 opt: 3344 Z-score: 3204.0 bits: 602.7 E(32554): 3.8e-172 Smith-Waterman score: 3344; 94.5% identity (97.0% similar) in 526 aa overlap (10-532:73-598) 10 20 30 pF1KE4 MDDYSLDEFRRRWQEELAQAQAPKKRRRPEAAERRAR-- : . :. .....: :. ..:. . CCDS91 SGRGEQASGDPALAQRLLEGAGRPPAARATRAEGQDVASRSRSPLAREGAGGGEQLVDQL 50 60 70 80 90 100 40 50 60 70 80 90 pF1KE4 -RPENEMNDVPFFDIQLPYELAINIFQYLDRKELGRCAQVSKTWKVIAEDEVLWYRLCQQ : :::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS91 IRDLNEMNDVPFFDIQLPYELAINIFQYLDRKELGRCAQVSKTWKVIAEDEVLWYRLCQQ 110 120 130 140 150 160 100 110 120 130 140 150 pF1KE4 EGHLPDSSISDYSCWKLIFQECRAKEHMLQTNWKNRKGAVSELEHVPDTVLCDVHSHDGV :::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::: CCDS91 EGHLPDSSISDYSCWKLIFQECRAKEHMLRTNWKNRKGAVSELEHVPDTVLCDVHSHDGV 170 180 190 200 210 220 160 170 180 190 200 210 pF1KE4 VIAGYTSGDVRVWDTRTWDYVAPFLESEDEEDEPGMQPNVSFVRINSSLAVAAYEDGFLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS91 VIAGYTSGDVRVWDTRTWDYVAPFLESEDEEDEPGMQPNVSFVRINSSLAVAAYEDGFLN 230 240 250 260 270 280 220 230 240 250 260 270 pF1KE4 IWDLRTGKYPVHRFEHDARIQALALSQDDATVATASAFDVVMLSPNEEGYWQIAAEFEVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS91 IWDLRTGKYPVHRFEHDARIQALALSQDDATVATASAFDVVMLSPNEEGYWQIAAEFEVP 290 300 310 320 330 340 280 290 300 310 320 330 pF1KE4 KLVQYLEIVPETRRYPVAVAAAGDLMYLLKAEDSARTLLYAHGPPVTCLDVSANQVAFGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS91 KLVQYLEIVPETRRYPVAVAAAGDLMYLLKAEDSARTLLYAHGPPVTCLDVSANQVAFGV 350 360 370 380 390 400 340 350 360 370 380 390 pF1KE4 QGLGWVYEGSKILVYSLEAGRRLLKLGNVLRDFTCVNLSDSPPNLMVSGNMDGRVRIHDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS91 QGLGWVYEGSKILVYSLEAGRRLLKLGNVLRDFTCVNLSDSPPNLMVSGNMDGRVRIHDL 410 420 430 440 450 460 400 410 420 430 440 450 pF1KE4 RSGNIALSLSAHQLRVSAVQMDDWKIVSGGEEGLVSVWDYRMNQKLWEVYSGHPVQHISF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS91 RSGNIALSLSAHQLRVSAVQMDDWKIVSGGEEGLVSVWDYRMNQKLWEVYSGHPVQHISF 470 480 490 500 510 520 460 470 480 490 500 510 pF1KE4 SSHSLITANVPYQTVMRNADLDSFTTHRRHRGLIRAYEFAVDQLAFQSPLPVCRSSCDAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS91 SSHSLITANVPYQTVMRNADLDSFTTHRRHRGLIRAYEFAVDQLAFQSPLPVCRSSCDAM 530 540 550 560 570 580 520 530 pF1KE4 ATHYYDLALAFPYNHV :::::::::::::::: CCDS91 ATHYYDLALAFPYNHV 590 532 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 01:48:31 2016 done: Sun Nov 6 01:48:31 2016 Total Scan time: 3.120 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]