FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2014, 592 aa 1>>>pF1KE2014 592 - 592 aa - 592 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.7123+/-0.00137; mu= 4.3169+/- 0.081 mean_var=256.7524+/-52.524, 0's: 0 Z-trim(108.4): 30 B-trim: 0 in 0/51 Lambda= 0.080042 statistics sampled from 10142 (10156) to 10142 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.668), E-opt: 0.2 (0.312), width: 16 Scan time: 2.720 The best scores are: opt bits E(32554) CCDS9154.1 BRAP gene_id:8315|Hs108|chr12 ( 592) 3936 468.5 1e-131 >>CCDS9154.1 BRAP gene_id:8315|Hs108|chr12 (592 aa) initn: 3936 init1: 3936 opt: 3936 Z-score: 2478.1 bits: 468.5 E(32554): 1e-131 Smith-Waterman score: 3936; 100.0% identity (100.0% similar) in 592 aa overlap (1-592:1-592) 10 20 30 40 50 60 pF1KE2 MSVSLVVIRLELAEHSPVPAGFGFSAAAGEMSDEEIKKTTLASAVACLEGKSPGEKVAII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS91 MSVSLVVIRLELAEHSPVPAGFGFSAAAGEMSDEEIKKTTLASAVACLEGKSPGEKVAII 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 HQHLGRREMTDVIIETMKSNPDELKTTVEERKSSEASPTAQRSKDHSKECINAAPDSPSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS91 HQHLGRREMTDVIIETMKSNPDELKTTVEERKSSEASPTAQRSKDHSKECINAAPDSPSK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 QLPDQISFFSGNPSVEIVHGIMHLYKTNKMTSLKEDVRRSAMLCILTVPAAMTSHDLMKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS91 QLPDQISFFSGNPSVEIVHGIMHLYKTNKMTSLKEDVRRSAMLCILTVPAAMTSHDLMKF 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 VAPFNEVIEQMKIIRDSTPNQYMVLIKFRAQADADSFYMTCNGRQFNSIEDDVCQLVYVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS91 VAPFNEVIEQMKIIRDSTPNQYMVLIKFRAQADADSFYMTCNGRQFNSIEDDVCQLVYVE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 RAEVLKSEDGASLPVMDLTELPKCTVCLERMDESVNGILTTLCNHSFHSQCLQRWDDTTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS91 RAEVLKSEDGASLPVMDLTELPKCTVCLERMDESVNGILTTLCNHSFHSQCLQRWDDTTC 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 PVCRYCQTPEPVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS91 PVCRYCQTPEPVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 TNHRVWDYAGDNYVHRLVASKTDGKIVQYECEGDTCQEEKIDALQLEYSYLLTSQLESQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS91 TNHRVWDYAGDNYVHRLVASKTDGKIVQYECEGDTCQEEKIDALQLEYSYLLTSQLESQR 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 IYWENKIVRIEKDTAEEINNMKTKFKETIEKCDNLEHKLNDLLKEKQSVERKCTQLNTKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS91 IYWENKIVRIEKDTAEEINNMKTKFKETIEKCDNLEHKLNDLLKEKQSVERKCTQLNTKV 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 AKLTNELKEEQEMNKCLRANQVLLQNKLKEEERVLKETCDQKDLQITEIQEQLRDVMFYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS91 AKLTNELKEEQEMNKCLRANQVLLQNKLKEEERVLKETCDQKDLQITEIQEQLRDVMFYL 490 500 510 520 530 540 550 560 570 580 590 pF1KE2 ETQQKINHLPAETRQEIQEGQINIAMASASSPASSGGSGKLPSRKGRSKRGK :::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS91 ETQQKINHLPAETRQEIQEGQINIAMASASSPASSGGSGKLPSRKGRSKRGK 550 560 570 580 590 592 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 14:42:35 2016 done: Sun Nov 6 14:42:36 2016 Total Scan time: 2.720 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]