FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6256, 209 aa 1>>>pF1KE6256 209 - 209 aa - 209 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3001+/-0.00085; mu= 13.1587+/- 0.051 mean_var=56.1562+/-11.370, 0's: 0 Z-trim(105.3): 14 B-trim: 171 in 1/48 Lambda= 0.171149 statistics sampled from 8319 (8327) to 8319 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.655), E-opt: 0.2 (0.256), width: 16 Scan time: 1.260 The best scores are: opt bits E(32554) CCDS9136.1 GLTP gene_id:51228|Hs108|chr12 ( 209) 1379 348.5 1.8e-96 CCDS56473.1 PLEKHA8 gene_id:84725|Hs108|chr7 ( 519) 364 98.0 1.1e-20 CCDS75574.1 PLEKHA8 gene_id:84725|Hs108|chr7 ( 459) 309 84.4 1.2e-16 CCDS5424.1 PLEKHA8 gene_id:84725|Hs108|chr7 ( 440) 255 71.0 1.2e-12 >>CCDS9136.1 GLTP gene_id:51228|Hs108|chr12 (209 aa) initn: 1379 init1: 1379 opt: 1379 Z-score: 1845.5 bits: 348.5 E(32554): 1.8e-96 Smith-Waterman score: 1379; 100.0% identity (100.0% similar) in 209 aa overlap (1-209:1-209) 10 20 30 40 50 60 pF1KE6 MALLAEHLLKPLPADKQIETGPFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKAVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS91 MALLAEHLLKPLPADKQIETGPFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKAVY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 DTNPAKFRTLQNILEVEKEMYGAEWPKVGATLALMWLKRGLRFIQVFLQSICDGERDENH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS91 DTNPAKFRTLQNILEVEKEMYGAEWPKVGATLALMWLKRGLRFIQVFLQSICDGERDENH 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 PNLIRVNATKAYEMALKKYHGWIVQKIFQAALYAAPYKSDFLKALSKGQNVTEEECLEKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS91 PNLIRVNATKAYEMALKKYHGWIVQKIFQAALYAAPYKSDFLKALSKGQNVTEEECLEKI 130 140 150 160 170 180 190 200 pF1KE6 RLFLVNYTATIDVIYEMYTQMNAELNYKV ::::::::::::::::::::::::::::: CCDS91 RLFLVNYTATIDVIYEMYTQMNAELNYKV 190 200 >>CCDS56473.1 PLEKHA8 gene_id:84725|Hs108|chr7 (519 aa) initn: 352 init1: 142 opt: 364 Z-score: 484.6 bits: 98.0 E(32554): 1.1e-20 Smith-Waterman score: 364; 36.5% identity (62.0% similar) in 192 aa overlap (15-198:327-511) 10 20 30 40 pF1KE6 MALLAEHLLKPLPADKQIETGPFLEAVSHLPPFFDCLGSPVFTP :. : : :: . . : .: :: ::.: CCDS56 PECLWEEGKEVIPTFFSTMNTSFSDIELLEDSGIPTEAFLASCYAVVPVLDKLGPTVFAP 300 310 320 330 340 350 50 60 70 80 90 100 pF1KE6 IKADISGNITKIKAVYDTNPAKFRTLQNILEVEKEMYGAEWPKVGATLALMWLKRGLRFI .: :. ::: :.. : :: .: :::.:. : : :. . .:: ::.::::::.:. CCDS56 VKMDLVGNIKKVNQKYITNKEEFTTLQKIVLHEVEADVAQV-RNSATEALLWLKRGLKFL 360 370 380 390 400 410 110 120 130 140 150 160 pF1KE6 QVFLQSICDGERDENHPNLIRVNATKAYEMALKKYHGWIVQKIFQAALYAAPYKSDFLKA . :: . .::.: :.. ..:: .:...:::.:. .: :: ::: ::. : CCDS56 KGFLTEVKNGEKD------IQTALNNAYGKTLRQHHGWVVRGVFALALRAAPSYEDFVAA 420 430 440 450 460 170 180 190 200 pF1KE6 LSKGQNVTEEECL-----EKIRLFLVNYT---ATIDVIYEMYTQMNAELNYKV :. .. ..: . . . :.: . : .:..::.. CCDS56 LTVKEGDHQKEAFSIGMQRDLSLYLPAMEKQLAILDTLYEVHGLESDEVV 470 480 490 500 510 >>CCDS75574.1 PLEKHA8 gene_id:84725|Hs108|chr7 (459 aa) initn: 303 init1: 142 opt: 309 Z-score: 412.1 bits: 84.4 E(32554): 1.2e-16 Smith-Waterman score: 309; 40.3% identity (64.9% similar) in 134 aa overlap (15-148:327-453) 10 20 30 40 pF1KE6 MALLAEHLLKPLPADKQIETGPFLEAVSHLPPFFDCLGSPVFTP :. : : :: . . : .: :: ::.: CCDS75 PECLWEEGKEVIPTFFSTMNTSFSDIELLEDSGIPTEAFLASCYAVVPVLDKLGPTVFAP 300 310 320 330 340 350 50 60 70 80 90 100 pF1KE6 IKADISGNITKIKAVYDTNPAKFRTLQNILEVEKEMYGAEWPKVGATLALMWLKRGLRFI .: :. ::: :.. : :: .: :::.:. : : :. . .:: ::.::::::.:. CCDS75 VKMDLVGNIKKVNQKYITNKEEFTTLQKIVLHEVEADVAQV-RNSATEALLWLKRGLKFL 360 370 380 390 400 410 110 120 130 140 150 160 pF1KE6 QVFLQSICDGERDENHPNLIRVNATKAYEMALKKYHGWIVQKIFQAALYAAPYKSDFLKA . :: . .::.: :.. ..:: .:...:::.:. .: CCDS75 KGFLTEVKNGEKD------IQTALNNAYGKTLRQHHGWVVRGVFAGHTNV 420 430 440 450 170 180 190 200 pF1KE6 LSKGQNVTEEECLEKIRLFLVNYTATIDVIYEMYTQMNAELNYKV >>CCDS5424.1 PLEKHA8 gene_id:84725|Hs108|chr7 (440 aa) initn: 244 init1: 142 opt: 255 Z-score: 340.3 bits: 71.0 E(32554): 1.2e-12 Smith-Waterman score: 255; 43.7% identity (65.0% similar) in 103 aa overlap (15-117:327-428) 10 20 30 40 pF1KE6 MALLAEHLLKPLPADKQIETGPFLEAVSHLPPFFDCLGSPVFTP :. : : :: . . : .: :: ::.: CCDS54 PECLWEEGKEVIPTFFSTMNTSFSDIELLEDSGIPTEAFLASCYAVVPVLDKLGPTVFAP 300 310 320 330 340 350 50 60 70 80 90 100 pF1KE6 IKADISGNITKIKAVYDTNPAKFRTLQNILEVEKEMYGAEWPKVGATLALMWLKRGLRFI .: :. ::: :.. : :: .: :::.:. : : :. . .:: ::.::::::.:. CCDS54 VKMDLVGNIKKVNQKYITNKEEFTTLQKIVLHEVEADVAQV-RNSATEALLWLKRGLKFL 360 370 380 390 400 410 110 120 130 140 150 160 pF1KE6 QVFLQSICDGERDENHPNLIRVNATKAYEMALKKYHGWIVQKIFQAALYAAPYKSDFLKA . :: . .::.: CCDS54 KGFLTEVKNGEKDIQTALRNPTENT 420 430 440 209 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 11:31:52 2016 done: Tue Nov 8 11:31:52 2016 Total Scan time: 1.260 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]