FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5157, 126 aa 1>>>pF1KE5157 126 - 126 aa - 126 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.1563+/-0.000544; mu= 12.2548+/- 0.033 mean_var=57.6178+/-11.228, 0's: 0 Z-trim(113.1): 6 B-trim: 0 in 0/51 Lambda= 0.168965 statistics sampled from 13762 (13765) to 13762 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.795), E-opt: 0.2 (0.423), width: 16 Scan time: 1.780 The best scores are: opt bits E(32554) CCDS8571.1 C12orf57 gene_id:113246|Hs108|chr12 ( 126) 809 204.2 1.8e-53 CCDS76516.1 C12orf57 gene_id:113246|Hs108|chr12 ( 91) 605 154.4 1.3e-38 CCDS76515.1 C12orf57 gene_id:113246|Hs108|chr12 ( 97) 337 89.1 6.2e-19 >>CCDS8571.1 C12orf57 gene_id:113246|Hs108|chr12 (126 aa) initn: 809 init1: 809 opt: 809 Z-score: 1073.5 bits: 204.2 E(32554): 1.8e-53 Smith-Waterman score: 809; 100.0% identity (100.0% similar) in 126 aa overlap (1-126:1-126) 10 20 30 40 50 60 pF1KE5 MASASTQPAALSAEQAKVVLAEVIQAFSAPENAVRMDEARDNACNDMGKMLQFVLPVATQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS85 MASASTQPAALSAEQAKVVLAEVIQAFSAPENAVRMDEARDNACNDMGKMLQFVLPVATQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 IQQEVIKAYGFSCDGEGVLKFARLVKSYEAQDPEIASLSGKLKALFLPPMTLPPHGPAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS85 IQQEVIKAYGFSCDGEGVLKFARLVKSYEAQDPEIASLSGKLKALFLPPMTLPPHGPAAG 70 80 90 100 110 120 pF1KE5 GSVAAS :::::: CCDS85 GSVAAS >>CCDS76516.1 C12orf57 gene_id:113246|Hs108|chr12 (91 aa) initn: 605 init1: 605 opt: 605 Z-score: 807.0 bits: 154.4 E(32554): 1.3e-38 Smith-Waterman score: 605; 100.0% identity (100.0% similar) in 91 aa overlap (36-126:1-91) 10 20 30 40 50 60 pF1KE5 TQPAALSAEQAKVVLAEVIQAFSAPENAVRMDEARDNACNDMGKMLQFVLPVATQIQQEV :::::::::::::::::::::::::::::: CCDS76 MDEARDNACNDMGKMLQFVLPVATQIQQEV 10 20 30 70 80 90 100 110 120 pF1KE5 IKAYGFSCDGEGVLKFARLVKSYEAQDPEIASLSGKLKALFLPPMTLPPHGPAAGGSVAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 IKAYGFSCDGEGVLKFARLVKSYEAQDPEIASLSGKLKALFLPPMTLPPHGPAAGGSVAA 40 50 60 70 80 90 pF1KE5 S : CCDS76 S >>CCDS76515.1 C12orf57 gene_id:113246|Hs108|chr12 (97 aa) initn: 337 init1: 337 opt: 337 Z-score: 453.5 bits: 89.1 E(32554): 6.2e-19 Smith-Waterman score: 548; 77.0% identity (77.0% similar) in 126 aa overlap (1-126:1-97) 10 20 30 40 50 60 pF1KE5 MASASTQPAALSAEQAKVVLAEVIQAFSAPENAVRMDEARDNACNDMGKMLQFVLPVATQ :::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 MASASTQPAALSAEQAKVVLAEVIQAFSAPENAVRMDEARDNACNDMG------------ 10 20 30 40 70 80 90 100 110 120 pF1KE5 IQQEVIKAYGFSCDGEGVLKFARLVKSYEAQDPEIASLSGKLKALFLPPMTLPPHGPAAG ::::::::::::::::::::::::::::::::::::::::::: CCDS76 -----------------VLKFARLVKSYEAQDPEIASLSGKLKALFLPPMTLPPHGPAAG 50 60 70 80 90 pF1KE5 GSVAAS :::::: CCDS76 GSVAAS 126 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 22:08:25 2016 done: Mon Nov 7 22:08:25 2016 Total Scan time: 1.780 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]