FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6194, 69 aa 1>>>pF1KE6194 69 - 69 aa - 69 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.5259+/-0.00043; mu= 10.9505+/- 0.026 mean_var=48.3410+/- 9.638, 0's: 0 Z-trim(116.6): 4 B-trim: 0 in 0/52 Lambda= 0.184466 statistics sampled from 17224 (17227) to 17224 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.885), E-opt: 0.2 (0.529), width: 16 Scan time: 1.130 The best scores are: opt bits E(32554) CCDS8054.1 COX8A gene_id:1351|Hs108|chr11 ( 69) 457 127.6 6.1e-31 >>CCDS8054.1 COX8A gene_id:1351|Hs108|chr11 (69 aa) initn: 457 init1: 457 opt: 457 Z-score: 668.9 bits: 127.6 E(32554): 6.1e-31 Smith-Waterman score: 457; 100.0% identity (100.0% similar) in 69 aa overlap (1-69:1-69) 10 20 30 40 50 60 pF1KE6 MSVLTPLLLRGLTGSARRLPVPRAKIHSLPPEGKLGIMELAVGLTSCFVTFLLPAGWILS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS80 MSVLTPLLLRGLTGSARRLPVPRAKIHSLPPEGKLGIMELAVGLTSCFVTFLLPAGWILS 10 20 30 40 50 60 pF1KE6 HLETYRRPE ::::::::: CCDS80 HLETYRRPE 69 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 10:14:34 2016 done: Tue Nov 8 10:14:34 2016 Total Scan time: 1.130 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]