FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2410, 286 aa 1>>>pF1KE2410 286 - 286 aa - 286 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.4407+/-0.000718; mu= 14.6785+/- 0.043 mean_var=70.2408+/-14.163, 0's: 0 Z-trim(109.9): 12 B-trim: 642 in 1/51 Lambda= 0.153031 statistics sampled from 11193 (11200) to 11193 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.725), E-opt: 0.2 (0.344), width: 16 Scan time: 2.460 The best scores are: opt bits E(32554) CCDS7906.1 ALKBH3 gene_id:221120|Hs108|chr11 ( 286) 2009 452.2 2e-127 CCDS31897.1 ALKBH2 gene_id:121642|Hs108|chr12 ( 261) 377 91.9 5.4e-19 >>CCDS7906.1 ALKBH3 gene_id:221120|Hs108|chr11 (286 aa) initn: 2009 init1: 2009 opt: 2009 Z-score: 2401.2 bits: 452.2 E(32554): 2e-127 Smith-Waterman score: 2009; 99.7% identity (100.0% similar) in 286 aa overlap (1-286:1-286) 10 20 30 40 50 60 pF1KE2 MEEKRRRARVQGAWAAPVKSQAIAQPATTAKSHLHQKPGQTWKNKEHHLSDREFVFKEPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS79 MEEKRRRARVQGAWAAPVKSQAIAQPATTAKSHLHQKPGQTWKNKEHHLSDREFVFKEPQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 QVVRRAPEPRVIDREGVYEISLSPTGVSRVCLYPGFVDVKEADWILEQLCQDVPWKQRTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS79 QVVRRAPEPRVIDREGVYEISLSPTGVSRVCLYPGFVDVKEADWILEQLCQDVPWKQRTG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 IREDITYQQPRLTAWYGELPYTYSRITMEPNPHWHPVLRTLKNRIEENTGHTFNSLLCNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS79 IREDITYQQPRLTAWYGELPYTYSRITMEPNPHWHPVLRTLKNRIEENTGHTFNSLLCNL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 YRNEKDSVDWHSDDEPSLGRCPIIASLSFGATRTFEMRKKPPPEENGEYTYVERVKIPLD :::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::: CCDS79 YRNEKDSVDWHSDDEPSLGRCPIIASLSFGATRTFEMRKKPPPEENGDYTYVERVKIPLD 190 200 210 220 230 240 250 260 270 280 pF1KE2 HGTLLIMEGATQADWQHRVPKEYHSREPRVNLTFRTVYPDPRGAPW :::::::::::::::::::::::::::::::::::::::::::::: CCDS79 HGTLLIMEGATQADWQHRVPKEYHSREPRVNLTFRTVYPDPRGAPW 250 260 270 280 >>CCDS31897.1 ALKBH2 gene_id:121642|Hs108|chr12 (261 aa) initn: 339 init1: 163 opt: 377 Z-score: 454.5 bits: 91.9 E(32554): 5.4e-19 Smith-Waterman score: 377; 37.0% identity (60.9% similar) in 192 aa overlap (91-277:67-256) 70 80 90 100 110 120 pF1KE2 QVVRRAPEPRVIDREGVYEISLSPTGVSRVCLYPGFVDVKEADWILEQLCQDVPWKQRTG : : . ::: :...: ..: . . CCDS31 TRKRPRREAPGNGGHSAGPSWRHIRAEGLDCSYTVLFGKAEADEIFQELEKEVEYFTGAL 40 50 60 70 80 90 130 140 150 160 170 pF1KE2 IREDIT---YQQPRLTAWYGE--LPYTYSRITMEPNPHWHPVLRTLKNRIEENTGHTFNS : .. .. :: : ::. : ::.: .:. :.: : :::. ..... ::.::: CCDS31 ARVQVFGKWHSVPRKQATYGDAGLTYTFSGLTLSPKP-WIPVLERIRDHVSGVTGQTFNF 100 110 120 130 140 150 180 190 200 210 220 230 pF1KE2 LLCNLYRNEKDSVDWHSDDEPSLGRCPIIASLSFGATRTFEMRKKPPPEENGEYTYVERV .: : :.. : . : ::: :. :::.:::: : : .:.: . .. : : CCDS31 VLINRYKDGCDHIGEHRDDERELAPGSPIASVSFGACRDFVFRHKDS-RGKSPSRRVAVV 160 170 180 190 200 210 240 250 260 270 280 pF1KE2 KIPLDHGTLLIMEGATQADWQHRVPKEYHSREPRVNLTFRTVYPDPRGAPW ..:: ::.::.:. :.. : : .: . . :::::::: . CCDS31 RLPLAHGSLLMMNHPTNTHWYHSLPVRKKVLAPRVNLTFRKILLTKK 220 230 240 250 260 286 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 19:23:24 2016 done: Sat Nov 5 19:23:24 2016 Total Scan time: 2.460 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]