FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE0089, 708 aa 1>>>pF1KE0089 708 - 708 aa - 708 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0513+/-0.000374; mu= 22.6295+/- 0.023 mean_var=84.0387+/-16.730, 0's: 0 Z-trim(114.9): 81 B-trim: 436 in 1/50 Lambda= 0.139905 statistics sampled from 24991 (25072) to 24991 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.662), E-opt: 0.2 (0.294), width: 16 Scan time: 9.670 The best scores are: opt bits E(85289) XP_005269983 (OMIM: 611749) PREDICTED: ubiquitin t ( 708) 4887 996.7 0 NP_060050 (OMIM: 611749) ubiquitin thioesterase ZR ( 708) 4887 996.7 0 XP_016871846 (OMIM: 611749) PREDICTED: ubiquitin t ( 708) 4887 996.7 0 XP_005269982 (OMIM: 611749) PREDICTED: ubiquitin t ( 734) 4887 996.7 0 XP_006717970 (OMIM: 611749) PREDICTED: ubiquitin t ( 734) 4887 996.7 0 XP_016871847 (OMIM: 611749) PREDICTED: ubiquitin t ( 382) 2618 538.4 1.9e-152 XP_011538189 (OMIM: 611749) PREDICTED: ubiquitin t ( 248) 1610 334.8 2.5e-91 XP_011534398 (OMIM: 191163,616744) PREDICTED: tumo ( 689) 267 64.2 2e-09 NP_001257437 (OMIM: 191163,616744) tumor necrosis ( 790) 267 64.2 2.2e-09 NP_006281 (OMIM: 191163,616744) tumor necrosis fac ( 790) 267 64.2 2.2e-09 XP_011534397 (OMIM: 191163,616744) PREDICTED: tumo ( 790) 267 64.2 2.2e-09 XP_005267176 (OMIM: 191163,616744) PREDICTED: tumo ( 790) 267 64.2 2.2e-09 NP_001257436 (OMIM: 191163,616744) tumor necrosis ( 790) 267 64.2 2.2e-09 XP_016857340 (OMIM: 611748) PREDICTED: OTU domain- ( 714) 244 59.5 5.2e-08 XP_016857339 (OMIM: 611748) PREDICTED: OTU domain- ( 764) 244 59.6 5.4e-08 XP_011508089 (OMIM: 611748) PREDICTED: OTU domain- ( 773) 244 59.6 5.5e-08 XP_011508088 (OMIM: 611748) PREDICTED: OTU domain- ( 773) 244 59.6 5.5e-08 XP_011508090 (OMIM: 611748) PREDICTED: OTU domain- ( 773) 244 59.6 5.5e-08 NP_064590 (OMIM: 611748) OTU domain-containing pro ( 843) 244 59.6 5.8e-08 XP_011508086 (OMIM: 611748) PREDICTED: OTU domain- ( 852) 244 59.6 5.9e-08 XP_011508084 (OMIM: 611748) PREDICTED: OTU domain- ( 852) 244 59.6 5.9e-08 XP_011508085 (OMIM: 611748) PREDICTED: OTU domain- ( 852) 244 59.6 5.9e-08 XP_011508087 (OMIM: 611748) PREDICTED: OTU domain- ( 852) 244 59.6 5.9e-08 NP_001316836 (OMIM: 612024) OTU domain-containing ( 425) 234 57.3 1.5e-07 NP_570971 (OMIM: 612024) OTU domain-containing pro ( 926) 234 57.6 2.5e-07 XP_016860112 (OMIM: 601181,608033) PREDICTED: E3 S (2807) 168 44.8 0.0057 XP_011509878 (OMIM: 601181,608033) PREDICTED: E3 S (3199) 168 44.8 0.0062 NP_006258 (OMIM: 601181,608033) E3 SUMO-protein li (3224) 168 44.8 0.0062 XP_005264061 (OMIM: 601181,608033) PREDICTED: E3 S (3232) 168 44.8 0.0063 XP_005264062 (OMIM: 601181,608033) PREDICTED: E3 S (3232) 168 44.8 0.0063 XP_005264060 (OMIM: 601181,608033) PREDICTED: E3 S (3250) 168 44.8 0.0063 XP_011509877 (OMIM: 601181,608033) PREDICTED: E3 S (3257) 168 44.8 0.0063 XP_005264059 (OMIM: 601181,608033) PREDICTED: E3 S (3258) 168 44.8 0.0063 >>XP_005269983 (OMIM: 611749) PREDICTED: ubiquitin thioe (708 aa) initn: 4887 init1: 4887 opt: 4887 Z-score: 5329.6 bits: 996.7 E(85289): 0 Smith-Waterman score: 4887; 100.0% identity (100.0% similar) in 708 aa overlap (1-708:1-708) 10 20 30 40 50 60 pF1KE0 MSERGIKWACEYCTYENWPSAIKCTMCRAQRPSGTIITEDPFKSGSSDVGRDWDPSSTEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MSERGIKWACEYCTYENWPSAIKCTMCRAQRPSGTIITEDPFKSGSSDVGRDWDPSSTEG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 GSSPLICPDSSARPRVKSSYSMENANKWSCHMCTYLNWPRAIRCTQCLSQRRTRSPTESP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 GSSPLICPDSSARPRVKSSYSMENANKWSCHMCTYLNWPRAIRCTQCLSQRRTRSPTESP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 QSSGSGSRPVAFSVDPCEEYNDRNKLNTRTQHWTCSVCTYENWAKAKRCVVCDHPRPNNI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 QSSGSGSRPVAFSVDPCEEYNDRNKLNTRTQHWTCSVCTYENWAKAKRCVVCDHPRPNNI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE0 EAIELAETEEASSIINEQDRARWRGSCSSGNSQRRSPPATKRDSEVKMDFQRIELAGAVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 EAIELAETEEASSIINEQDRARWRGSCSSGNSQRRSPPATKRDSEVKMDFQRIELAGAVG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE0 SKEELEVDFKKLKQIKNRMKKTDWLFLNACVGVVEGDLAAIEAYKSSGGDIARQLTADEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 SKEELEVDFKKLKQIKNRMKKTDWLFLNACVGVVEGDLAAIEAYKSSGGDIARQLTADEV 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE0 RLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTEVSQQAAKCIPAMVCPELTEQIRREIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 RLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTEVSQQAAKCIPAMVCPELTEQIRREIA 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE0 ASLHQRKGDFACYFLTDLVTFTLPADIEDLPPTVQEKLFDEVLDRDVQKELEEESPIINW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 ASLHQRKGDFACYFLTDLVTFTLPADIEDLPPTVQEKLFDEVLDRDVQKELEEESPIINW 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE0 SLELATRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKDSVLRKALHDSLHDCSHWFYTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 SLELATRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKDSVLRKALHDSLHDCSHWFYTR 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE0 WKDWESWYSQSFGLHFSLREEQWQEDWAFILSLASQPGASLEQTHIFVLAHILRRPIIVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 WKDWESWYSQSFGLHFSLREEQWQEDWAFILSLASQPGASLEQTHIFVLAHILRRPIIVY 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE0 GVKYYKSFRGETLGYTRFQGVYLPLLWEQSFCWKSPIALGYTRGHFSALVAMENDGYGNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 GVKYYKSFRGETLGYTRFQGVYLPLLWEQSFCWKSPIALGYTRGHFSALVAMENDGYGNR 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE0 GAGANLNTDDDVTITFLPLVDSERKLLHVHFLSAQELGNEEQQEKLLREWLDCCVTEGGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 GAGANLNTDDDVTITFLPLVDSERKLLHVHFLSAQELGNEEQQEKLLREWLDCCVTEGGV 610 620 630 640 650 660 670 680 690 700 pF1KE0 LVAMQKSSRRRNHPLVTQMVEKWLDRYRQIRPCTSLSDGEEDEDDEDE :::::::::::::::::::::::::::::::::::::::::::::::: XP_005 LVAMQKSSRRRNHPLVTQMVEKWLDRYRQIRPCTSLSDGEEDEDDEDE 670 680 690 700 >>NP_060050 (OMIM: 611749) ubiquitin thioesterase ZRANB1 (708 aa) initn: 4887 init1: 4887 opt: 4887 Z-score: 5329.6 bits: 996.7 E(85289): 0 Smith-Waterman score: 4887; 100.0% identity (100.0% similar) in 708 aa overlap (1-708:1-708) 10 20 30 40 50 60 pF1KE0 MSERGIKWACEYCTYENWPSAIKCTMCRAQRPSGTIITEDPFKSGSSDVGRDWDPSSTEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 MSERGIKWACEYCTYENWPSAIKCTMCRAQRPSGTIITEDPFKSGSSDVGRDWDPSSTEG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 GSSPLICPDSSARPRVKSSYSMENANKWSCHMCTYLNWPRAIRCTQCLSQRRTRSPTESP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 GSSPLICPDSSARPRVKSSYSMENANKWSCHMCTYLNWPRAIRCTQCLSQRRTRSPTESP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 QSSGSGSRPVAFSVDPCEEYNDRNKLNTRTQHWTCSVCTYENWAKAKRCVVCDHPRPNNI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 QSSGSGSRPVAFSVDPCEEYNDRNKLNTRTQHWTCSVCTYENWAKAKRCVVCDHPRPNNI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE0 EAIELAETEEASSIINEQDRARWRGSCSSGNSQRRSPPATKRDSEVKMDFQRIELAGAVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 EAIELAETEEASSIINEQDRARWRGSCSSGNSQRRSPPATKRDSEVKMDFQRIELAGAVG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE0 SKEELEVDFKKLKQIKNRMKKTDWLFLNACVGVVEGDLAAIEAYKSSGGDIARQLTADEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 SKEELEVDFKKLKQIKNRMKKTDWLFLNACVGVVEGDLAAIEAYKSSGGDIARQLTADEV 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE0 RLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTEVSQQAAKCIPAMVCPELTEQIRREIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 RLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTEVSQQAAKCIPAMVCPELTEQIRREIA 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE0 ASLHQRKGDFACYFLTDLVTFTLPADIEDLPPTVQEKLFDEVLDRDVQKELEEESPIINW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 ASLHQRKGDFACYFLTDLVTFTLPADIEDLPPTVQEKLFDEVLDRDVQKELEEESPIINW 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE0 SLELATRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKDSVLRKALHDSLHDCSHWFYTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 SLELATRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKDSVLRKALHDSLHDCSHWFYTR 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE0 WKDWESWYSQSFGLHFSLREEQWQEDWAFILSLASQPGASLEQTHIFVLAHILRRPIIVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 WKDWESWYSQSFGLHFSLREEQWQEDWAFILSLASQPGASLEQTHIFVLAHILRRPIIVY 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE0 GVKYYKSFRGETLGYTRFQGVYLPLLWEQSFCWKSPIALGYTRGHFSALVAMENDGYGNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 GVKYYKSFRGETLGYTRFQGVYLPLLWEQSFCWKSPIALGYTRGHFSALVAMENDGYGNR 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE0 GAGANLNTDDDVTITFLPLVDSERKLLHVHFLSAQELGNEEQQEKLLREWLDCCVTEGGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 GAGANLNTDDDVTITFLPLVDSERKLLHVHFLSAQELGNEEQQEKLLREWLDCCVTEGGV 610 620 630 640 650 660 670 680 690 700 pF1KE0 LVAMQKSSRRRNHPLVTQMVEKWLDRYRQIRPCTSLSDGEEDEDDEDE :::::::::::::::::::::::::::::::::::::::::::::::: NP_060 LVAMQKSSRRRNHPLVTQMVEKWLDRYRQIRPCTSLSDGEEDEDDEDE 670 680 690 700 >>XP_016871846 (OMIM: 611749) PREDICTED: ubiquitin thioe (708 aa) initn: 4887 init1: 4887 opt: 4887 Z-score: 5329.6 bits: 996.7 E(85289): 0 Smith-Waterman score: 4887; 100.0% identity (100.0% similar) in 708 aa overlap (1-708:1-708) 10 20 30 40 50 60 pF1KE0 MSERGIKWACEYCTYENWPSAIKCTMCRAQRPSGTIITEDPFKSGSSDVGRDWDPSSTEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MSERGIKWACEYCTYENWPSAIKCTMCRAQRPSGTIITEDPFKSGSSDVGRDWDPSSTEG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 GSSPLICPDSSARPRVKSSYSMENANKWSCHMCTYLNWPRAIRCTQCLSQRRTRSPTESP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GSSPLICPDSSARPRVKSSYSMENANKWSCHMCTYLNWPRAIRCTQCLSQRRTRSPTESP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 QSSGSGSRPVAFSVDPCEEYNDRNKLNTRTQHWTCSVCTYENWAKAKRCVVCDHPRPNNI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QSSGSGSRPVAFSVDPCEEYNDRNKLNTRTQHWTCSVCTYENWAKAKRCVVCDHPRPNNI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE0 EAIELAETEEASSIINEQDRARWRGSCSSGNSQRRSPPATKRDSEVKMDFQRIELAGAVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EAIELAETEEASSIINEQDRARWRGSCSSGNSQRRSPPATKRDSEVKMDFQRIELAGAVG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE0 SKEELEVDFKKLKQIKNRMKKTDWLFLNACVGVVEGDLAAIEAYKSSGGDIARQLTADEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SKEELEVDFKKLKQIKNRMKKTDWLFLNACVGVVEGDLAAIEAYKSSGGDIARQLTADEV 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE0 RLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTEVSQQAAKCIPAMVCPELTEQIRREIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTEVSQQAAKCIPAMVCPELTEQIRREIA 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE0 ASLHQRKGDFACYFLTDLVTFTLPADIEDLPPTVQEKLFDEVLDRDVQKELEEESPIINW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ASLHQRKGDFACYFLTDLVTFTLPADIEDLPPTVQEKLFDEVLDRDVQKELEEESPIINW 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE0 SLELATRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKDSVLRKALHDSLHDCSHWFYTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SLELATRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKDSVLRKALHDSLHDCSHWFYTR 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE0 WKDWESWYSQSFGLHFSLREEQWQEDWAFILSLASQPGASLEQTHIFVLAHILRRPIIVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 WKDWESWYSQSFGLHFSLREEQWQEDWAFILSLASQPGASLEQTHIFVLAHILRRPIIVY 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE0 GVKYYKSFRGETLGYTRFQGVYLPLLWEQSFCWKSPIALGYTRGHFSALVAMENDGYGNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GVKYYKSFRGETLGYTRFQGVYLPLLWEQSFCWKSPIALGYTRGHFSALVAMENDGYGNR 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE0 GAGANLNTDDDVTITFLPLVDSERKLLHVHFLSAQELGNEEQQEKLLREWLDCCVTEGGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GAGANLNTDDDVTITFLPLVDSERKLLHVHFLSAQELGNEEQQEKLLREWLDCCVTEGGV 610 620 630 640 650 660 670 680 690 700 pF1KE0 LVAMQKSSRRRNHPLVTQMVEKWLDRYRQIRPCTSLSDGEEDEDDEDE :::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LVAMQKSSRRRNHPLVTQMVEKWLDRYRQIRPCTSLSDGEEDEDDEDE 670 680 690 700 >>XP_005269982 (OMIM: 611749) PREDICTED: ubiquitin thioe (734 aa) initn: 4887 init1: 4887 opt: 4887 Z-score: 5329.4 bits: 996.7 E(85289): 0 Smith-Waterman score: 4887; 100.0% identity (100.0% similar) in 708 aa overlap (1-708:27-734) 10 20 30 pF1KE0 MSERGIKWACEYCTYENWPSAIKCTMCRAQRPSG :::::::::::::::::::::::::::::::::: XP_005 MCKVEVIAWELKSYFLPDTAHFKKCTMSERGIKWACEYCTYENWPSAIKCTMCRAQRPSG 10 20 30 40 50 60 40 50 60 70 80 90 pF1KE0 TIITEDPFKSGSSDVGRDWDPSSTEGGSSPLICPDSSARPRVKSSYSMENANKWSCHMCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 TIITEDPFKSGSSDVGRDWDPSSTEGGSSPLICPDSSARPRVKSSYSMENANKWSCHMCT 70 80 90 100 110 120 100 110 120 130 140 150 pF1KE0 YLNWPRAIRCTQCLSQRRTRSPTESPQSSGSGSRPVAFSVDPCEEYNDRNKLNTRTQHWT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 YLNWPRAIRCTQCLSQRRTRSPTESPQSSGSGSRPVAFSVDPCEEYNDRNKLNTRTQHWT 130 140 150 160 170 180 160 170 180 190 200 210 pF1KE0 CSVCTYENWAKAKRCVVCDHPRPNNIEAIELAETEEASSIINEQDRARWRGSCSSGNSQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 CSVCTYENWAKAKRCVVCDHPRPNNIEAIELAETEEASSIINEQDRARWRGSCSSGNSQR 190 200 210 220 230 240 220 230 240 250 260 270 pF1KE0 RSPPATKRDSEVKMDFQRIELAGAVGSKEELEVDFKKLKQIKNRMKKTDWLFLNACVGVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 RSPPATKRDSEVKMDFQRIELAGAVGSKEELEVDFKKLKQIKNRMKKTDWLFLNACVGVV 250 260 270 280 290 300 280 290 300 310 320 330 pF1KE0 EGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 EGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTE 310 320 330 340 350 360 340 350 360 370 380 390 pF1KE0 VSQQAAKCIPAMVCPELTEQIRREIAASLHQRKGDFACYFLTDLVTFTLPADIEDLPPTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 VSQQAAKCIPAMVCPELTEQIRREIAASLHQRKGDFACYFLTDLVTFTLPADIEDLPPTV 370 380 390 400 410 420 400 410 420 430 440 450 pF1KE0 QEKLFDEVLDRDVQKELEEESPIINWSLELATRLDSRLYALWNRTAGDCLLDSVLQATWG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 QEKLFDEVLDRDVQKELEEESPIINWSLELATRLDSRLYALWNRTAGDCLLDSVLQATWG 430 440 450 460 470 480 460 470 480 490 500 510 pF1KE0 IYDKDSVLRKALHDSLHDCSHWFYTRWKDWESWYSQSFGLHFSLREEQWQEDWAFILSLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 IYDKDSVLRKALHDSLHDCSHWFYTRWKDWESWYSQSFGLHFSLREEQWQEDWAFILSLA 490 500 510 520 530 540 520 530 540 550 560 570 pF1KE0 SQPGASLEQTHIFVLAHILRRPIIVYGVKYYKSFRGETLGYTRFQGVYLPLLWEQSFCWK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 SQPGASLEQTHIFVLAHILRRPIIVYGVKYYKSFRGETLGYTRFQGVYLPLLWEQSFCWK 550 560 570 580 590 600 580 590 600 610 620 630 pF1KE0 SPIALGYTRGHFSALVAMENDGYGNRGAGANLNTDDDVTITFLPLVDSERKLLHVHFLSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 SPIALGYTRGHFSALVAMENDGYGNRGAGANLNTDDDVTITFLPLVDSERKLLHVHFLSA 610 620 630 640 650 660 640 650 660 670 680 690 pF1KE0 QELGNEEQQEKLLREWLDCCVTEGGVLVAMQKSSRRRNHPLVTQMVEKWLDRYRQIRPCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 QELGNEEQQEKLLREWLDCCVTEGGVLVAMQKSSRRRNHPLVTQMVEKWLDRYRQIRPCT 670 680 690 700 710 720 700 pF1KE0 SLSDGEEDEDDEDE :::::::::::::: XP_005 SLSDGEEDEDDEDE 730 >>XP_006717970 (OMIM: 611749) PREDICTED: ubiquitin thioe (734 aa) initn: 4887 init1: 4887 opt: 4887 Z-score: 5329.4 bits: 996.7 E(85289): 0 Smith-Waterman score: 4887; 100.0% identity (100.0% similar) in 708 aa overlap (1-708:27-734) 10 20 30 pF1KE0 MSERGIKWACEYCTYENWPSAIKCTMCRAQRPSG :::::::::::::::::::::::::::::::::: XP_006 MCKVEVIAWELKSYFLPDTAHFKKCTMSERGIKWACEYCTYENWPSAIKCTMCRAQRPSG 10 20 30 40 50 60 40 50 60 70 80 90 pF1KE0 TIITEDPFKSGSSDVGRDWDPSSTEGGSSPLICPDSSARPRVKSSYSMENANKWSCHMCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 TIITEDPFKSGSSDVGRDWDPSSTEGGSSPLICPDSSARPRVKSSYSMENANKWSCHMCT 70 80 90 100 110 120 100 110 120 130 140 150 pF1KE0 YLNWPRAIRCTQCLSQRRTRSPTESPQSSGSGSRPVAFSVDPCEEYNDRNKLNTRTQHWT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 YLNWPRAIRCTQCLSQRRTRSPTESPQSSGSGSRPVAFSVDPCEEYNDRNKLNTRTQHWT 130 140 150 160 170 180 160 170 180 190 200 210 pF1KE0 CSVCTYENWAKAKRCVVCDHPRPNNIEAIELAETEEASSIINEQDRARWRGSCSSGNSQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 CSVCTYENWAKAKRCVVCDHPRPNNIEAIELAETEEASSIINEQDRARWRGSCSSGNSQR 190 200 210 220 230 240 220 230 240 250 260 270 pF1KE0 RSPPATKRDSEVKMDFQRIELAGAVGSKEELEVDFKKLKQIKNRMKKTDWLFLNACVGVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 RSPPATKRDSEVKMDFQRIELAGAVGSKEELEVDFKKLKQIKNRMKKTDWLFLNACVGVV 250 260 270 280 290 300 280 290 300 310 320 330 pF1KE0 EGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 EGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTE 310 320 330 340 350 360 340 350 360 370 380 390 pF1KE0 VSQQAAKCIPAMVCPELTEQIRREIAASLHQRKGDFACYFLTDLVTFTLPADIEDLPPTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 VSQQAAKCIPAMVCPELTEQIRREIAASLHQRKGDFACYFLTDLVTFTLPADIEDLPPTV 370 380 390 400 410 420 400 410 420 430 440 450 pF1KE0 QEKLFDEVLDRDVQKELEEESPIINWSLELATRLDSRLYALWNRTAGDCLLDSVLQATWG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 QEKLFDEVLDRDVQKELEEESPIINWSLELATRLDSRLYALWNRTAGDCLLDSVLQATWG 430 440 450 460 470 480 460 470 480 490 500 510 pF1KE0 IYDKDSVLRKALHDSLHDCSHWFYTRWKDWESWYSQSFGLHFSLREEQWQEDWAFILSLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 IYDKDSVLRKALHDSLHDCSHWFYTRWKDWESWYSQSFGLHFSLREEQWQEDWAFILSLA 490 500 510 520 530 540 520 530 540 550 560 570 pF1KE0 SQPGASLEQTHIFVLAHILRRPIIVYGVKYYKSFRGETLGYTRFQGVYLPLLWEQSFCWK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 SQPGASLEQTHIFVLAHILRRPIIVYGVKYYKSFRGETLGYTRFQGVYLPLLWEQSFCWK 550 560 570 580 590 600 580 590 600 610 620 630 pF1KE0 SPIALGYTRGHFSALVAMENDGYGNRGAGANLNTDDDVTITFLPLVDSERKLLHVHFLSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 SPIALGYTRGHFSALVAMENDGYGNRGAGANLNTDDDVTITFLPLVDSERKLLHVHFLSA 610 620 630 640 650 660 640 650 660 670 680 690 pF1KE0 QELGNEEQQEKLLREWLDCCVTEGGVLVAMQKSSRRRNHPLVTQMVEKWLDRYRQIRPCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 QELGNEEQQEKLLREWLDCCVTEGGVLVAMQKSSRRRNHPLVTQMVEKWLDRYRQIRPCT 670 680 690 700 710 720 700 pF1KE0 SLSDGEEDEDDEDE :::::::::::::: XP_006 SLSDGEEDEDDEDE 730 >>XP_016871847 (OMIM: 611749) PREDICTED: ubiquitin thioe (382 aa) initn: 2618 init1: 2618 opt: 2618 Z-score: 2857.9 bits: 538.4 E(85289): 1.9e-152 Smith-Waterman score: 2618; 100.0% identity (100.0% similar) in 382 aa overlap (327-708:1-382) 300 310 320 330 340 350 pF1KE0 ADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTEVSQQAAKCIPAMVCPELTEQIR :::::::::::::::::::::::::::::: XP_016 MLAILLTEVSQQAAKCIPAMVCPELTEQIR 10 20 30 360 370 380 390 400 410 pF1KE0 REIAASLHQRKGDFACYFLTDLVTFTLPADIEDLPPTVQEKLFDEVLDRDVQKELEEESP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 REIAASLHQRKGDFACYFLTDLVTFTLPADIEDLPPTVQEKLFDEVLDRDVQKELEEESP 40 50 60 70 80 90 420 430 440 450 460 470 pF1KE0 IINWSLELATRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKDSVLRKALHDSLHDCSHW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 IINWSLELATRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKDSVLRKALHDSLHDCSHW 100 110 120 130 140 150 480 490 500 510 520 530 pF1KE0 FYTRWKDWESWYSQSFGLHFSLREEQWQEDWAFILSLASQPGASLEQTHIFVLAHILRRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 FYTRWKDWESWYSQSFGLHFSLREEQWQEDWAFILSLASQPGASLEQTHIFVLAHILRRP 160 170 180 190 200 210 540 550 560 570 580 590 pF1KE0 IIVYGVKYYKSFRGETLGYTRFQGVYLPLLWEQSFCWKSPIALGYTRGHFSALVAMENDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 IIVYGVKYYKSFRGETLGYTRFQGVYLPLLWEQSFCWKSPIALGYTRGHFSALVAMENDG 220 230 240 250 260 270 600 610 620 630 640 650 pF1KE0 YGNRGAGANLNTDDDVTITFLPLVDSERKLLHVHFLSAQELGNEEQQEKLLREWLDCCVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 YGNRGAGANLNTDDDVTITFLPLVDSERKLLHVHFLSAQELGNEEQQEKLLREWLDCCVT 280 290 300 310 320 330 660 670 680 690 700 pF1KE0 EGGVLVAMQKSSRRRNHPLVTQMVEKWLDRYRQIRPCTSLSDGEEDEDDEDE :::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EGGVLVAMQKSSRRRNHPLVTQMVEKWLDRYRQIRPCTSLSDGEEDEDDEDE 340 350 360 370 380 >>XP_011538189 (OMIM: 611749) PREDICTED: ubiquitin thioe (248 aa) initn: 1610 init1: 1610 opt: 1610 Z-score: 1760.7 bits: 334.8 E(85289): 2.5e-91 Smith-Waterman score: 1610; 100.0% identity (100.0% similar) in 232 aa overlap (477-708:17-248) 450 460 470 480 490 500 pF1KE0 SVLQATWGIYDKDSVLRKALHDSLHDCSHWFYTRWKDWESWYSQSFGLHFSLREEQWQED :::::::::::::::::::::::::::::: XP_011 MNTRNISHLLFIQVIKFYTRWKDWESWYSQSFGLHFSLREEQWQED 10 20 30 40 510 520 530 540 550 560 pF1KE0 WAFILSLASQPGASLEQTHIFVLAHILRRPIIVYGVKYYKSFRGETLGYTRFQGVYLPLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 WAFILSLASQPGASLEQTHIFVLAHILRRPIIVYGVKYYKSFRGETLGYTRFQGVYLPLL 50 60 70 80 90 100 570 580 590 600 610 620 pF1KE0 WEQSFCWKSPIALGYTRGHFSALVAMENDGYGNRGAGANLNTDDDVTITFLPLVDSERKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 WEQSFCWKSPIALGYTRGHFSALVAMENDGYGNRGAGANLNTDDDVTITFLPLVDSERKL 110 120 130 140 150 160 630 640 650 660 670 680 pF1KE0 LHVHFLSAQELGNEEQQEKLLREWLDCCVTEGGVLVAMQKSSRRRNHPLVTQMVEKWLDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LHVHFLSAQELGNEEQQEKLLREWLDCCVTEGGVLVAMQKSSRRRNHPLVTQMVEKWLDR 170 180 190 200 210 220 690 700 pF1KE0 YRQIRPCTSLSDGEEDEDDEDE :::::::::::::::::::::: XP_011 YRQIRPCTSLSDGEEDEDDEDE 230 240 >>XP_011534398 (OMIM: 191163,616744) PREDICTED: tumor ne (689 aa) initn: 349 init1: 122 opt: 267 Z-score: 290.1 bits: 64.2 E(85289): 2e-09 Smith-Waterman score: 470; 35.7% identity (59.9% similar) in 277 aa overlap (392-651:58-307) 370 380 390 400 410 420 pF1KE0 SLHQRKGDFACYFLTDLVTFTLPADIEDLPPTVQEKLFDEVLDRDVQKELEEESPIINWS : .: . ..::..: :: .. . :: XP_011 DIFKPTNGIIHHFKTMHRYTLEMFRTCQFCPQFREIIHKALIDRNIQATLESQKKL-NWC 30 40 50 60 70 80 430 440 450 460 470 480 pF1KE0 LELATRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKDSVLRKALHDSLHDC-SHWFYTR :. .: :: . :.::. .. : ::. : : :::::: ..:.. .. : : XP_011 REV-----RKLVALKTNGDGNCLMHATSQYMWGVQDTDLVLRKALFSTLKETDTRNFKFR 90 100 110 120 130 140 490 500 510 520 pF1KE0 WKDWESWYSQSF---GLHFSLREEQWQEDWAFILSLASQ--PGA-------SLEQTHIFV :. :: :: : :: .. :. :...: ....:: : : :::. :::: XP_011 WQ-LESLKSQEFVETGLCYDTRN--WNDEWDNLIKMASTDTPMARSGLQYNSLEEIHIFV 150 160 170 180 190 530 540 550 560 570 580 pF1KE0 LAHILRRPIIVYGVKYYKSFR-GETLGYTRFQGVYLPLLWEQSFCWKSPIALGYTRGHFS : .:::::::: . :. .:.. : ... . :.:::: : . :.. ::.::: :: XP_011 LCNILRRPIIVISDKMLRSLESGSNFAPLKVGGIYLPLHWPAQECYRYPIVLGYDSHHFV 200 210 220 230 240 250 590 600 610 620 630 640 pF1KE0 ALVAMENDGYGNRGAGANLNTDDDVTITFLPLVDSER---KLLHVHFLSAQELGNEEQQE ::.....: :. .:::. .: . :.::::. : .:..: XP_011 PLVTLKDSGPEIRA---------------VPLVNRDRGRFEDLKVHFLTDPE---NEMKE 260 270 280 290 300 650 660 670 680 690 700 pF1KE0 KLLREWLDCCVTEGGVLVAMQKSSRRRNHPLVTQMVEKWLDRYRQIRPCTSLSDGEEDED :::.:.: XP_011 KLLKEYLMVIEIPVQGWDHGTTHLINAAKLDEANLPKEINLVDDYFELVQHEYKKWQENS 310 320 330 340 350 360 >>NP_001257437 (OMIM: 191163,616744) tumor necrosis fact (790 aa) initn: 345 init1: 122 opt: 267 Z-score: 289.4 bits: 64.2 E(85289): 2.2e-09 Smith-Waterman score: 470; 35.7% identity (59.9% similar) in 277 aa overlap (392-651:58-307) 370 380 390 400 410 420 pF1KE0 SLHQRKGDFACYFLTDLVTFTLPADIEDLPPTVQEKLFDEVLDRDVQKELEEESPIINWS : .: . ..::..: :: .. . :: NP_001 DIFKPTNGIIHHFKTMHRYTLEMFRTCQFCPQFREIIHKALIDRNIQATLESQKKL-NWC 30 40 50 60 70 80 430 440 450 460 470 480 pF1KE0 LELATRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKDSVLRKALHDSLHDC-SHWFYTR :. .: :: . :.::. .. : ::. : : :::::: ..:.. .. : : NP_001 REV-----RKLVALKTNGDGNCLMHATSQYMWGVQDTDLVLRKALFSTLKETDTRNFKFR 90 100 110 120 130 140 490 500 510 520 pF1KE0 WKDWESWYSQSF---GLHFSLREEQWQEDWAFILSLASQ--PGA-------SLEQTHIFV :. :: :: : :: .. :. :...: ....:: : : :::. :::: NP_001 WQ-LESLKSQEFVETGLCYDTRN--WNDEWDNLIKMASTDTPMARSGLQYNSLEEIHIFV 150 160 170 180 190 530 540 550 560 570 580 pF1KE0 LAHILRRPIIVYGVKYYKSFR-GETLGYTRFQGVYLPLLWEQSFCWKSPIALGYTRGHFS : .:::::::: . :. .:.. : ... . :.:::: : . :.. ::.::: :: NP_001 LCNILRRPIIVISDKMLRSLESGSNFAPLKVGGIYLPLHWPAQECYRYPIVLGYDSHHFV 200 210 220 230 240 250 590 600 610 620 630 640 pF1KE0 ALVAMENDGYGNRGAGANLNTDDDVTITFLPLVDSER---KLLHVHFLSAQELGNEEQQE ::.....: :. .:::. .: . :.::::. : .:..: NP_001 PLVTLKDSGPEIRA---------------VPLVNRDRGRFEDLKVHFLTDPE---NEMKE 260 270 280 290 300 650 660 670 680 690 700 pF1KE0 KLLREWLDCCVTEGGVLVAMQKSSRRRNHPLVTQMVEKWLDRYRQIRPCTSLSDGEEDED :::.:.: NP_001 KLLKEYLMVIEIPVQGWDHGTTHLINAAKLDEANLPKEINLVDDYFELVQHEYKKWQENS 310 320 330 340 350 360 >>NP_006281 (OMIM: 191163,616744) tumor necrosis factor (790 aa) initn: 345 init1: 122 opt: 267 Z-score: 289.4 bits: 64.2 E(85289): 2.2e-09 Smith-Waterman score: 470; 35.7% identity (59.9% similar) in 277 aa overlap (392-651:58-307) 370 380 390 400 410 420 pF1KE0 SLHQRKGDFACYFLTDLVTFTLPADIEDLPPTVQEKLFDEVLDRDVQKELEEESPIINWS : .: . ..::..: :: .. . :: NP_006 DIFKPTNGIIHHFKTMHRYTLEMFRTCQFCPQFREIIHKALIDRNIQATLESQKKL-NWC 30 40 50 60 70 80 430 440 450 460 470 480 pF1KE0 LELATRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKDSVLRKALHDSLHDC-SHWFYTR :. .: :: . :.::. .. : ::. : : :::::: ..:.. .. : : NP_006 REV-----RKLVALKTNGDGNCLMHATSQYMWGVQDTDLVLRKALFSTLKETDTRNFKFR 90 100 110 120 130 140 490 500 510 520 pF1KE0 WKDWESWYSQSF---GLHFSLREEQWQEDWAFILSLASQ--PGA-------SLEQTHIFV :. :: :: : :: .. :. :...: ....:: : : :::. :::: NP_006 WQ-LESLKSQEFVETGLCYDTRN--WNDEWDNLIKMASTDTPMARSGLQYNSLEEIHIFV 150 160 170 180 190 530 540 550 560 570 580 pF1KE0 LAHILRRPIIVYGVKYYKSFR-GETLGYTRFQGVYLPLLWEQSFCWKSPIALGYTRGHFS : .:::::::: . :. .:.. : ... . :.:::: : . :.. ::.::: :: NP_006 LCNILRRPIIVISDKMLRSLESGSNFAPLKVGGIYLPLHWPAQECYRYPIVLGYDSHHFV 200 210 220 230 240 250 590 600 610 620 630 640 pF1KE0 ALVAMENDGYGNRGAGANLNTDDDVTITFLPLVDSER---KLLHVHFLSAQELGNEEQQE ::.....: :. .:::. .: . :.::::. : .:..: NP_006 PLVTLKDSGPEIRA---------------VPLVNRDRGRFEDLKVHFLTDPE---NEMKE 260 270 280 290 300 650 660 670 680 690 700 pF1KE0 KLLREWLDCCVTEGGVLVAMQKSSRRRNHPLVTQMVEKWLDRYRQIRPCTSLSDGEEDED :::.:.: NP_006 KLLKEYLMVIEIPVQGWDHGTTHLINAAKLDEANLPKEINLVDDYFELVQHEYKKWQENS 310 320 330 340 350 360 708 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 15:18:40 2016 done: Sun Nov 6 15:18:41 2016 Total Scan time: 9.670 Total Display time: 0.110 Function used was FASTA [36.3.4 Apr, 2011]