FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE0290, 292 aa 1>>>pF1KE0290 292 - 292 aa - 292 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.0027+/-0.000608; mu= 11.7306+/- 0.037 mean_var=163.8203+/-33.414, 0's: 0 Z-trim(118.9): 5 B-trim: 231 in 1/51 Lambda= 0.100205 statistics sampled from 19976 (19981) to 19976 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.862), E-opt: 0.2 (0.614), width: 16 Scan time: 2.740 The best scores are: opt bits E(32554) CCDS7607.1 NANOS1 gene_id:340719|Hs108|chr10 ( 292) 2063 308.7 3.2e-84 >>CCDS7607.1 NANOS1 gene_id:340719|Hs108|chr10 (292 aa) initn: 2063 init1: 2063 opt: 2063 Z-score: 1625.4 bits: 308.7 E(32554): 3.2e-84 Smith-Waterman score: 2063; 100.0% identity (100.0% similar) in 292 aa overlap (1-292:1-292) 10 20 30 40 50 60 pF1KE0 MEAFPWAPRSPRRGRAPPPMALVPSARYVSAPGPAHPQPFSSWNDYLGLATLITKAVDGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 MEAFPWAPRSPRRGRAPPPMALVPSARYVSAPGPAHPQPFSSWNDYLGLATLITKAVDGE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 PRFGCARGGNGGGGSPPSSSSSSCCSPHTGAGPGALGPALGPPDYDEDDDDDSDEPGSRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 PRFGCARGGNGGGGSPPSSSSSSCCSPHTGAGPGALGPALGPPDYDEDDDDDSDEPGSRG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 RYLGSALELRALELCAGPAEAGLLEERFAELSPFAGRAAAVLLGCAPAAAAAATTTSEAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 RYLGSALELRALELCAGPAEAGLLEERFAELSPFAGRAAAVLLGCAPAAAAAATTTSEAT 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE0 PREERAPAWAAEPRLHAASGAAAARLLKPELQVCVFCRNNKEAMALYTTHILKGPDGRVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 PREERAPAWAAEPRLHAASGAAAARLLKPELQVCVFCRNNKEAMALYTTHILKGPDGRVL 190 200 210 220 230 240 250 260 270 280 290 pF1KE0 CPVLRRYTCPLCGASGDNAHTIKYCPLSKVPPPPARPPPRSARDGPPGKKLR :::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 CPVLRRYTCPLCGASGDNAHTIKYCPLSKVPPPPARPPPRSARDGPPGKKLR 250 260 270 280 290 292 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 07:29:41 2016 done: Tue Nov 8 07:29:42 2016 Total Scan time: 2.740 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]