FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1870, 391 aa 1>>>pF1KE1870 391 - 391 aa - 391 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.5874+/-0.000971; mu= 15.3470+/- 0.058 mean_var=67.1221+/-13.215, 0's: 0 Z-trim(104.8): 18 B-trim: 0 in 0/51 Lambda= 0.156546 statistics sampled from 8057 (8068) to 8057 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.626), E-opt: 0.2 (0.248), width: 16 Scan time: 2.830 The best scores are: opt bits E(32554) CCDS7114.1 TRDMT1 gene_id:1787|Hs108|chr10 ( 391) 2543 583.4 1.2e-166 >>CCDS7114.1 TRDMT1 gene_id:1787|Hs108|chr10 (391 aa) initn: 2543 init1: 2543 opt: 2543 Z-score: 3105.4 bits: 583.4 E(32554): 1.2e-166 Smith-Waterman score: 2543; 99.7% identity (100.0% similar) in 391 aa overlap (1-391:1-391) 10 20 30 40 50 60 pF1KE1 MEPLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 MEPLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 TLEEFDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLYILDILPRLQKLPKYILLEN ::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::: CCDS71 TLEEFDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLHILDILPRLQKLPKYILLEN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 VKGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 VKGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 QVLMEFPKIESVHPQKYAMDVENKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 QVLMEFPKIESVHPQKYAMDVENKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 KNQQDSDLSVKMLKDFLEDDTDVNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 KNQQDSDLSVKMLKDFLEDDTDVNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSY 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 IEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLRYFTPKEIANLLGFPPEFGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 IEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLRYFTPKEIANLLGFPPEFGF 310 320 330 340 350 360 370 380 390 pF1KE1 PEKITVKQRYRLLGNSLNVHVVAKLIKILYE ::::::::::::::::::::::::::::::: CCDS71 PEKITVKQRYRLLGNSLNVHVVAKLIKILYE 370 380 390 391 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 05:43:40 2016 done: Sun Nov 6 05:43:41 2016 Total Scan time: 2.830 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]