FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB8520, 874 aa 1>>>pF1KB8520 874 - 874 aa - 874 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 9.2030+/-0.000363; mu= 4.9544+/- 0.023 mean_var=219.9856+/-44.759, 0's: 0 Z-trim(120.9): 3 B-trim: 0 in 0/58 Lambda= 0.086472 statistics sampled from 36797 (36802) to 36797 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.75), E-opt: 0.2 (0.431), width: 16 Scan time: 13.010 The best scores are: opt bits E(85289) NP_060988 (OMIM: 609357) protein MCM10 homolog iso ( 874) 5744 729.8 1.3e-209 XP_011517840 (OMIM: 609357) PREDICTED: protein MCM ( 875) 5732 728.3 3.8e-209 NP_877428 (OMIM: 609357) protein MCM10 homolog iso ( 875) 5732 728.3 3.8e-209 >>NP_060988 (OMIM: 609357) protein MCM10 homolog isoform (874 aa) initn: 5744 init1: 5744 opt: 5744 Z-score: 3883.9 bits: 729.8 E(85289): 1.3e-209 Smith-Waterman score: 5744; 100.0% identity (100.0% similar) in 874 aa overlap (1-874:1-874) 10 20 30 40 50 60 pF1KB8 MDEEEDNLSLLTALLEENESALDCNSEENNFLTRENGEPDAFDELFDADGDGESYTEEAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 MDEEEDNLSLLTALLEENESALDCNSEENNFLTRENGEPDAFDELFDADGDGESYTEEAD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB8 DGETGETRDEKENLATLFGDMEDLTDEEEVPASQSTENRVLPAPAPRREKTNEELQEELR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 DGETGETRDEKENLATLFGDMEDLTDEEEVPASQSTENRVLPAPAPRREKTNEELQEELR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB8 NLQEQMKALQEQLKVTTIKQTASPARLQKSPEKSPRPPLKERRVQRIQESTCFSAELDVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 NLQEQMKALQEQLKVTTIKQTASPARLQKSPEKSPRPPLKERRVQRIQESTCFSAELDVP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB8 ALPRTKRVARTPKASPPDPKSSSSRMTSAPSQPLQTISRNKPSGITRGQIVGTPGSSGET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 ALPRTKRVARTPKASPPDPKSSSSRMTSAPSQPLQTISRNKPSGITRGQIVGTPGSSGET 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB8 TQPICVEAFSGLRLRRPRVSSTEMNKKMTGRKLIRLSQIKEKMAREKLEEIDWVTFGVIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 TQPICVEAFSGLRLRRPRVSSTEMNKKMTGRKLIRLSQIKEKMAREKLEEIDWVTFGVIL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB8 KKVTPQSVNSGKTFSIWKLNDLRDLTQCVSLFLFGEVHKALWKTEQGTVVGILNANPMKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 KKVTPQSVNSGKTFSIWKLNDLRDLTQCVSLFLFGEVHKALWKTEQGTVVGILNANPMKP 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB8 KDGSEEVCLSIDHPQKVLIMGEALDLGTCKAKKKNGEPCTQTVNLRDCEYCQYHVQAQYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 KDGSEEVCLSIDHPQKVLIMGEALDLGTCKAKKKNGEPCTQTVNLRDCEYCQYHVQAQYK 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB8 KLSAKRADLQSTFSGGRIPKKFARRGTSLKERLCQDGFYYGGVSSASYAASIAAAVAPKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 KLSAKRADLQSTFSGGRIPKKFARRGTSLKERLCQDGFYYGGVSSASYAASIAAAVAPKK 430 440 450 460 470 480 490 500 510 520 530 540 pF1KB8 KIQTTLSNLVVKGTNLIIQETRQKLGIPQKSLSCSEEFKELMDLPTCGARNLKQHLAKAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 KIQTTLSNLVVKGTNLIIQETRQKLGIPQKSLSCSEEFKELMDLPTCGARNLKQHLAKAT 490 500 510 520 530 540 550 560 570 580 590 600 pF1KB8 ASGIMGSPKPAIKSISASALLKQQKQRMLEMRRRKSEEIQKRFLQSSSEVESPAVPSSSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 ASGIMGSPKPAIKSISASALLKQQKQRMLEMRRRKSEEIQKRFLQSSSEVESPAVPSSSR 550 560 570 580 590 600 610 620 630 640 650 660 pF1KB8 QPPAQPPRTGSEFPRLEGAPATMTPKLGRGVLEGDDVLFYDESPPPRPKLSALAEAKKLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 QPPAQPPRTGSEFPRLEGAPATMTPKLGRGVLEGDDVLFYDESPPPRPKLSALAEAKKLA 610 620 630 640 650 660 670 680 690 700 710 720 pF1KB8 AITKLRAKGQVLTKTNPNSIKKKQKDPQDILEVKERVEKNTMFSSQAEDELEPARKKRRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 AITKLRAKGQVLTKTNPNSIKKKQKDPQDILEVKERVEKNTMFSSQAEDELEPARKKRRE 670 680 690 700 710 720 730 740 750 760 770 780 pF1KB8 QLAYLESEEFQKILKAKSKHTGILKEAEAEMQERYFEPLVKKEQMEEKMRNIREVKCRVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 QLAYLESEEFQKILKAKSKHTGILKEAEAEMQERYFEPLVKKEQMEEKMRNIREVKCRVV 730 740 750 760 770 780 790 800 810 820 830 840 pF1KB8 TCKTCAYTHFKLLETCVSEQHEYHWHDGVKRFFKCPCGNRSISLDRLPNKHCSNCGLYKW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 TCKTCAYTHFKLLETCVSEQHEYHWHDGVKRFFKCPCGNRSISLDRLPNKHCSNCGLYKW 790 800 810 820 830 840 850 860 870 pF1KB8 ERDGMLKEKTGPKIGGETLLPRGEEHAKFLNSLK :::::::::::::::::::::::::::::::::: NP_060 ERDGMLKEKTGPKIGGETLLPRGEEHAKFLNSLK 850 860 870 >>XP_011517840 (OMIM: 609357) PREDICTED: protein MCM10 h (875 aa) initn: 4779 init1: 4779 opt: 5732 Z-score: 3875.8 bits: 728.3 E(85289): 3.8e-209 Smith-Waterman score: 5732; 99.9% identity (99.9% similar) in 875 aa overlap (1-874:1-875) 10 20 30 40 50 60 pF1KB8 MDEEEDNLSLLTALLEENESALDCNSEENNFLTRENGEPDAFDELFDADGDGESYTEEAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MDEEEDNLSLLTALLEENESALDCNSEENNFLTRENGEPDAFDELFDADGDGESYTEEAD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB8 DGETGETRDEKENLATLFGDMEDLTDEEEVPASQSTENRVLPAPAPRREKTNEELQEELR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 DGETGETRDEKENLATLFGDMEDLTDEEEVPASQSTENRVLPAPAPRREKTNEELQEELR 70 80 90 100 110 120 130 140 150 160 170 pF1KB8 NLQEQMKALQEQLKVTTIKQTASPARLQKSP-EKSPRPPLKERRVQRIQESTCFSAELDV ::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::: XP_011 NLQEQMKALQEQLKVTTIKQTASPARLQKSPVEKSPRPPLKERRVQRIQESTCFSAELDV 130 140 150 160 170 180 180 190 200 210 220 230 pF1KB8 PALPRTKRVARTPKASPPDPKSSSSRMTSAPSQPLQTISRNKPSGITRGQIVGTPGSSGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PALPRTKRVARTPKASPPDPKSSSSRMTSAPSQPLQTISRNKPSGITRGQIVGTPGSSGE 190 200 210 220 230 240 240 250 260 270 280 290 pF1KB8 TTQPICVEAFSGLRLRRPRVSSTEMNKKMTGRKLIRLSQIKEKMAREKLEEIDWVTFGVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 TTQPICVEAFSGLRLRRPRVSSTEMNKKMTGRKLIRLSQIKEKMAREKLEEIDWVTFGVI 250 260 270 280 290 300 300 310 320 330 340 350 pF1KB8 LKKVTPQSVNSGKTFSIWKLNDLRDLTQCVSLFLFGEVHKALWKTEQGTVVGILNANPMK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LKKVTPQSVNSGKTFSIWKLNDLRDLTQCVSLFLFGEVHKALWKTEQGTVVGILNANPMK 310 320 330 340 350 360 360 370 380 390 400 410 pF1KB8 PKDGSEEVCLSIDHPQKVLIMGEALDLGTCKAKKKNGEPCTQTVNLRDCEYCQYHVQAQY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PKDGSEEVCLSIDHPQKVLIMGEALDLGTCKAKKKNGEPCTQTVNLRDCEYCQYHVQAQY 370 380 390 400 410 420 420 430 440 450 460 470 pF1KB8 KKLSAKRADLQSTFSGGRIPKKFARRGTSLKERLCQDGFYYGGVSSASYAASIAAAVAPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 KKLSAKRADLQSTFSGGRIPKKFARRGTSLKERLCQDGFYYGGVSSASYAASIAAAVAPK 430 440 450 460 470 480 480 490 500 510 520 530 pF1KB8 KKIQTTLSNLVVKGTNLIIQETRQKLGIPQKSLSCSEEFKELMDLPTCGARNLKQHLAKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 KKIQTTLSNLVVKGTNLIIQETRQKLGIPQKSLSCSEEFKELMDLPTCGARNLKQHLAKA 490 500 510 520 530 540 540 550 560 570 580 590 pF1KB8 TASGIMGSPKPAIKSISASALLKQQKQRMLEMRRRKSEEIQKRFLQSSSEVESPAVPSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 TASGIMGSPKPAIKSISASALLKQQKQRMLEMRRRKSEEIQKRFLQSSSEVESPAVPSSS 550 560 570 580 590 600 600 610 620 630 640 650 pF1KB8 RQPPAQPPRTGSEFPRLEGAPATMTPKLGRGVLEGDDVLFYDESPPPRPKLSALAEAKKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 RQPPAQPPRTGSEFPRLEGAPATMTPKLGRGVLEGDDVLFYDESPPPRPKLSALAEAKKL 610 620 630 640 650 660 660 670 680 690 700 710 pF1KB8 AAITKLRAKGQVLTKTNPNSIKKKQKDPQDILEVKERVEKNTMFSSQAEDELEPARKKRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 AAITKLRAKGQVLTKTNPNSIKKKQKDPQDILEVKERVEKNTMFSSQAEDELEPARKKRR 670 680 690 700 710 720 720 730 740 750 760 770 pF1KB8 EQLAYLESEEFQKILKAKSKHTGILKEAEAEMQERYFEPLVKKEQMEEKMRNIREVKCRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 EQLAYLESEEFQKILKAKSKHTGILKEAEAEMQERYFEPLVKKEQMEEKMRNIREVKCRV 730 740 750 760 770 780 780 790 800 810 820 830 pF1KB8 VTCKTCAYTHFKLLETCVSEQHEYHWHDGVKRFFKCPCGNRSISLDRLPNKHCSNCGLYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 VTCKTCAYTHFKLLETCVSEQHEYHWHDGVKRFFKCPCGNRSISLDRLPNKHCSNCGLYK 790 800 810 820 830 840 840 850 860 870 pF1KB8 WERDGMLKEKTGPKIGGETLLPRGEEHAKFLNSLK ::::::::::::::::::::::::::::::::::: XP_011 WERDGMLKEKTGPKIGGETLLPRGEEHAKFLNSLK 850 860 870 >>NP_877428 (OMIM: 609357) protein MCM10 homolog isoform (875 aa) initn: 4779 init1: 4779 opt: 5732 Z-score: 3875.8 bits: 728.3 E(85289): 3.8e-209 Smith-Waterman score: 5732; 99.9% identity (99.9% similar) in 875 aa overlap (1-874:1-875) 10 20 30 40 50 60 pF1KB8 MDEEEDNLSLLTALLEENESALDCNSEENNFLTRENGEPDAFDELFDADGDGESYTEEAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_877 MDEEEDNLSLLTALLEENESALDCNSEENNFLTRENGEPDAFDELFDADGDGESYTEEAD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB8 DGETGETRDEKENLATLFGDMEDLTDEEEVPASQSTENRVLPAPAPRREKTNEELQEELR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_877 DGETGETRDEKENLATLFGDMEDLTDEEEVPASQSTENRVLPAPAPRREKTNEELQEELR 70 80 90 100 110 120 130 140 150 160 170 pF1KB8 NLQEQMKALQEQLKVTTIKQTASPARLQKSP-EKSPRPPLKERRVQRIQESTCFSAELDV ::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::: NP_877 NLQEQMKALQEQLKVTTIKQTASPARLQKSPVEKSPRPPLKERRVQRIQESTCFSAELDV 130 140 150 160 170 180 180 190 200 210 220 230 pF1KB8 PALPRTKRVARTPKASPPDPKSSSSRMTSAPSQPLQTISRNKPSGITRGQIVGTPGSSGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_877 PALPRTKRVARTPKASPPDPKSSSSRMTSAPSQPLQTISRNKPSGITRGQIVGTPGSSGE 190 200 210 220 230 240 240 250 260 270 280 290 pF1KB8 TTQPICVEAFSGLRLRRPRVSSTEMNKKMTGRKLIRLSQIKEKMAREKLEEIDWVTFGVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_877 TTQPICVEAFSGLRLRRPRVSSTEMNKKMTGRKLIRLSQIKEKMAREKLEEIDWVTFGVI 250 260 270 280 290 300 300 310 320 330 340 350 pF1KB8 LKKVTPQSVNSGKTFSIWKLNDLRDLTQCVSLFLFGEVHKALWKTEQGTVVGILNANPMK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_877 LKKVTPQSVNSGKTFSIWKLNDLRDLTQCVSLFLFGEVHKALWKTEQGTVVGILNANPMK 310 320 330 340 350 360 360 370 380 390 400 410 pF1KB8 PKDGSEEVCLSIDHPQKVLIMGEALDLGTCKAKKKNGEPCTQTVNLRDCEYCQYHVQAQY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_877 PKDGSEEVCLSIDHPQKVLIMGEALDLGTCKAKKKNGEPCTQTVNLRDCEYCQYHVQAQY 370 380 390 400 410 420 420 430 440 450 460 470 pF1KB8 KKLSAKRADLQSTFSGGRIPKKFARRGTSLKERLCQDGFYYGGVSSASYAASIAAAVAPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_877 KKLSAKRADLQSTFSGGRIPKKFARRGTSLKERLCQDGFYYGGVSSASYAASIAAAVAPK 430 440 450 460 470 480 480 490 500 510 520 530 pF1KB8 KKIQTTLSNLVVKGTNLIIQETRQKLGIPQKSLSCSEEFKELMDLPTCGARNLKQHLAKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_877 KKIQTTLSNLVVKGTNLIIQETRQKLGIPQKSLSCSEEFKELMDLPTCGARNLKQHLAKA 490 500 510 520 530 540 540 550 560 570 580 590 pF1KB8 TASGIMGSPKPAIKSISASALLKQQKQRMLEMRRRKSEEIQKRFLQSSSEVESPAVPSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_877 TASGIMGSPKPAIKSISASALLKQQKQRMLEMRRRKSEEIQKRFLQSSSEVESPAVPSSS 550 560 570 580 590 600 600 610 620 630 640 650 pF1KB8 RQPPAQPPRTGSEFPRLEGAPATMTPKLGRGVLEGDDVLFYDESPPPRPKLSALAEAKKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_877 RQPPAQPPRTGSEFPRLEGAPATMTPKLGRGVLEGDDVLFYDESPPPRPKLSALAEAKKL 610 620 630 640 650 660 660 670 680 690 700 710 pF1KB8 AAITKLRAKGQVLTKTNPNSIKKKQKDPQDILEVKERVEKNTMFSSQAEDELEPARKKRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_877 AAITKLRAKGQVLTKTNPNSIKKKQKDPQDILEVKERVEKNTMFSSQAEDELEPARKKRR 670 680 690 700 710 720 720 730 740 750 760 770 pF1KB8 EQLAYLESEEFQKILKAKSKHTGILKEAEAEMQERYFEPLVKKEQMEEKMRNIREVKCRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_877 EQLAYLESEEFQKILKAKSKHTGILKEAEAEMQERYFEPLVKKEQMEEKMRNIREVKCRV 730 740 750 760 770 780 780 790 800 810 820 830 pF1KB8 VTCKTCAYTHFKLLETCVSEQHEYHWHDGVKRFFKCPCGNRSISLDRLPNKHCSNCGLYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_877 VTCKTCAYTHFKLLETCVSEQHEYHWHDGVKRFFKCPCGNRSISLDRLPNKHCSNCGLYK 790 800 810 820 830 840 840 850 860 870 pF1KB8 WERDGMLKEKTGPKIGGETLLPRGEEHAKFLNSLK ::::::::::::::::::::::::::::::::::: NP_877 WERDGMLKEKTGPKIGGETLLPRGEEHAKFLNSLK 850 860 870 874 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 15:35:18 2016 done: Sun Nov 6 15:35:20 2016 Total Scan time: 13.010 Total Display time: 0.060 Function used was FASTA [36.3.4 Apr, 2011]