FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1629, 146 aa 1>>>pF1KE1629 146 - 146 aa - 146 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.4265+/-0.000902; mu= 11.6602+/- 0.055 mean_var=107.3957+/-20.534, 0's: 0 Z-trim(109.5): 130 B-trim: 4 in 1/52 Lambda= 0.123760 statistics sampled from 10758 (10921) to 10758 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.72), E-opt: 0.2 (0.335), width: 16 Scan time: 1.810 The best scores are: opt bits E(32554) CCDS7068.1 CALML5 gene_id:51806|Hs108|chr10 ( 146) 931 176.1 6.7e-45 CCDS1832.1 CALM2 gene_id:805|Hs108|chr2 ( 149) 494 98.1 2.1e-21 CCDS33061.1 CALM3 gene_id:808|Hs108|chr19 ( 149) 494 98.1 2.1e-21 CCDS9892.1 CALM1 gene_id:801|Hs108|chr14 ( 149) 494 98.1 2.1e-21 CCDS7069.1 CALML3 gene_id:810|Hs108|chr10 ( 149) 465 92.9 7.6e-20 CCDS11820.1 CETN1 gene_id:1068|Hs108|chr18 ( 172) 373 76.6 7.4e-15 CCDS14716.1 CETN2 gene_id:1069|Hs108|chrX ( 172) 352 72.8 9.9e-14 CCDS73333.1 CABP4 gene_id:57010|Hs108|chr11 ( 170) 338 70.3 5.6e-13 CCDS8166.1 CABP4 gene_id:57010|Hs108|chr11 ( 275) 338 70.5 7.7e-13 CCDS13375.1 TNNC2 gene_id:7125|Hs108|chr20 ( 160) 328 68.5 1.8e-12 CCDS9204.1 CABP1 gene_id:9478|Hs108|chr12 ( 167) 321 67.3 4.5e-12 CCDS9205.1 CABP1 gene_id:9478|Hs108|chr12 ( 227) 321 67.4 5.5e-12 CCDS31913.1 CABP1 gene_id:9478|Hs108|chr12 ( 370) 321 67.6 7.7e-12 CCDS8170.1 CABP2 gene_id:51475|Hs108|chr11 ( 220) 314 66.1 1.3e-11 CCDS2857.1 TNNC1 gene_id:7134|Hs108|chr3 ( 161) 309 65.1 1.9e-11 CCDS4066.1 CETN3 gene_id:1070|Hs108|chr5 ( 167) 305 64.4 3.3e-11 >>CCDS7068.1 CALML5 gene_id:51806|Hs108|chr10 (146 aa) initn: 931 init1: 931 opt: 931 Z-score: 919.5 bits: 176.1 E(32554): 6.7e-45 Smith-Waterman score: 931; 100.0% identity (100.0% similar) in 146 aa overlap (1-146:1-146) 10 20 30 40 50 60 pF1KE1 MAGELTPEEEAQYKKAFSAVDTDGNGTINAQELGAALKATGKNLSEAQLRKLISEVDSDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 MAGELTPEEEAQYKKAFSAVDTDGNGTINAQELGAALKATGKNLSEAQLRKLISEVDSDG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 DGEISFQEFLTAAKKARAGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 DGEISFQEFLTAAKKARAGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELD 70 80 90 100 110 120 130 140 pF1KE1 AMIREADVDQDGRVNYEEFARMLAQE :::::::::::::::::::::::::: CCDS70 AMIREADVDQDGRVNYEEFARMLAQE 130 140 >>CCDS1832.1 CALM2 gene_id:805|Hs108|chr2 (149 aa) initn: 489 init1: 253 opt: 494 Z-score: 497.7 bits: 98.1 E(32554): 2.1e-21 Smith-Waterman score: 494; 51.4% identity (83.6% similar) in 146 aa overlap (1-143:1-146) 10 20 30 40 50 60 pF1KE1 MAGELTPEEEAQYKKAFSAVDTDGNGTINAQELGAALKATGKNLSEAQLRKLISEVDSDG :: .:: :. :..:.::: : ::.:::...:::..... :.: .::.:. .:.:::.:: CCDS18 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 DGEISFQEFLTA-AKKARA--GLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQE .: :.: :::: :.: . . :... :::.::.::.:.:.. :::..:..::. : .: CCDS18 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 70 80 90 100 110 120 120 130 140 pF1KE1 ELDAMIREADVDQDGRVNYEEFARMLAQE :.: ::::::.: ::.::::::..:. CCDS18 EVDEMIREADIDGDGQVNYEEFVQMMTAK 130 140 >>CCDS33061.1 CALM3 gene_id:808|Hs108|chr19 (149 aa) initn: 489 init1: 253 opt: 494 Z-score: 497.7 bits: 98.1 E(32554): 2.1e-21 Smith-Waterman score: 494; 51.4% identity (83.6% similar) in 146 aa overlap (1-143:1-146) 10 20 30 40 50 60 pF1KE1 MAGELTPEEEAQYKKAFSAVDTDGNGTINAQELGAALKATGKNLSEAQLRKLISEVDSDG :: .:: :. :..:.::: : ::.:::...:::..... :.: .::.:. .:.:::.:: CCDS33 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 DGEISFQEFLTA-AKKARA--GLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQE .: :.: :::: :.: . . :... :::.::.::.:.:.. :::..:..::. : .: CCDS33 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 70 80 90 100 110 120 120 130 140 pF1KE1 ELDAMIREADVDQDGRVNYEEFARMLAQE :.: ::::::.: ::.::::::..:. CCDS33 EVDEMIREADIDGDGQVNYEEFVQMMTAK 130 140 >>CCDS9892.1 CALM1 gene_id:801|Hs108|chr14 (149 aa) initn: 489 init1: 253 opt: 494 Z-score: 497.7 bits: 98.1 E(32554): 2.1e-21 Smith-Waterman score: 494; 51.4% identity (83.6% similar) in 146 aa overlap (1-143:1-146) 10 20 30 40 50 60 pF1KE1 MAGELTPEEEAQYKKAFSAVDTDGNGTINAQELGAALKATGKNLSEAQLRKLISEVDSDG :: .:: :. :..:.::: : ::.:::...:::..... :.: .::.:. .:.:::.:: CCDS98 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 DGEISFQEFLTA-AKKARA--GLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQE .: :.: :::: :.: . . :... :::.::.::.:.:.. :::..:..::. : .: CCDS98 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 70 80 90 100 110 120 120 130 140 pF1KE1 ELDAMIREADVDQDGRVNYEEFARMLAQE :.: ::::::.: ::.::::::..:. CCDS98 EVDEMIREADIDGDGQVNYEEFVQMMTAK 130 140 >>CCDS7069.1 CALML3 gene_id:810|Hs108|chr10 (149 aa) initn: 531 init1: 240 opt: 465 Z-score: 469.8 bits: 92.9 E(32554): 7.6e-20 Smith-Waterman score: 465; 47.0% identity (79.9% similar) in 149 aa overlap (1-146:1-149) 10 20 30 40 50 60 pF1KE1 MAGELTPEEEAQYKKAFSAVDTDGNGTINAQELGAALKATGKNLSEAQLRKLISEVDSDG :: .:: :. ...:.::: : ::.: :...:::..... :.: .::.:: ..::.: :: CCDS70 MADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDG 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 DGEISFQEFL-TAAKKARA--GLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQE .: ..: ::: :.: . . :... :::.::.::.: ... :::..:. ::. : .: CCDS70 NGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDE 70 80 90 100 110 120 120 130 140 pF1KE1 ELDAMIREADVDQDGRVNYEEFARMLAQE :.: ::: ::.: ::.::::::.:.:... CCDS70 EVDEMIRAADTDGDGQVNYEEFVRVLVSK 130 140 >>CCDS11820.1 CETN1 gene_id:1068|Hs108|chr18 (172 aa) initn: 428 init1: 210 opt: 373 Z-score: 380.2 bits: 76.6 E(32554): 7.4e-15 Smith-Waterman score: 373; 42.8% identity (71.0% similar) in 145 aa overlap (4-145:24-168) 10 20 30 40 pF1KE1 MAGELTPEEEAQYKKAFSAVDTDGNGTINAQELGAALKAT ::: ... . ..::. :.::.:::.:.:: .:..: CCDS11 MASGFKKPSAASTGQKRKVAPKPELTEDQKQEVREAFDLFDVDGSGTIDAKELKVAMRAL 10 20 30 40 50 60 50 60 70 80 90 pF1KE1 GKNLSEAQLRKLISEVDSDGDGEISFQEFL---TAAKKARAGLEDLQVAFRAFDQDGDGH : . . ...:.::::: .: :.:::..:: : . . :.. ::: ::.: :. CCDS11 GFEPRKEEMKKMISEVDREGTGKISFNDFLAVMTQKMSEKDTKEEILKAFRLFDDDETGK 70 80 90 100 110 120 100 110 120 130 140 pF1KE1 ITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLAQE :. .:.:. ::. : .:::. :: ::: : ::.:: ::: :.. . CCDS11 ISFKNLKRVANELGENLTDEELQEMIDEADRDGDGEVNEEEFLRIMKKTSLY 130 140 150 160 170 >>CCDS14716.1 CETN2 gene_id:1069|Hs108|chrX (172 aa) initn: 408 init1: 204 opt: 352 Z-score: 360.0 bits: 72.8 E(32554): 9.9e-14 Smith-Waterman score: 352; 38.6% identity (72.4% similar) in 145 aa overlap (4-145:24-168) 10 20 30 40 pF1KE1 MAGELTPEEEAQYKKAFSAVDTDGNGTINAQELGAALKAT ::: :.. . ..::. :.::.:::...:: .:..: CCDS14 MASNFKKANMASSSQRKRMSPKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRAL 10 20 30 40 50 60 50 60 70 80 90 pF1KE1 GKNLSEAQLRKLISEVDSDGDGEISFQEFLTAAKKA---RAGLEDLQVAFRAFDQDGDGH : . .. ...:.:::.:..: :...: .:::. . . :.. ::. ::.: :. CCDS14 GFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGK 70 80 90 100 110 120 100 110 120 130 140 pF1KE1 ITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLAQE :. .:.:. ::. : .:::. :: ::: : ::.:. .:: :.. . CCDS14 ISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKKTSLY 130 140 150 160 170 >>CCDS73333.1 CABP4 gene_id:57010|Hs108|chr11 (170 aa) initn: 401 init1: 132 opt: 338 Z-score: 346.5 bits: 70.3 E(32554): 5.6e-13 Smith-Waterman score: 338; 40.0% identity (67.3% similar) in 150 aa overlap (4-145:20-169) 10 20 30 40 pF1KE1 MAGELTPEEEAQYKKAFSAVDTDGNGTINAQELGAALKATGKNL :: ::: . . :: ::: .: :. .::: ... : CCDS73 MTEPWLALGTSWTLPLQDRELGPEELDELQAAFEEFDTDRDGYISHRELGDCMRTLGYMP 10 20 30 40 50 60 50 60 70 80 90 pF1KE1 SEAQLRKLISEVDSDGDGEISFQEFLT-AAKKARA------GLEDLQVAFRAFDQDGDGH .: .: .. ... :...:.::. . : : :...:..::: ::.: ::. CCDS73 TEMELLEVSQHIKMRMGGRVDFEEFVELIGPKLREETAHMLGVRELRIAFREFDRDRDGR 70 80 90 100 110 120 100 110 120 130 140 pF1KE1 ITVDELRRAM-AGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLAQE ::: :::.:. : ::.:: ::: :.::.:.. :: :...::. ::.. CCDS73 ITVAELREAVPALLGEPLAGPELDEMLREVDLNGDGTVDFDEFVMMLSRH 130 140 150 160 170 >>CCDS8166.1 CABP4 gene_id:57010|Hs108|chr11 (275 aa) initn: 422 init1: 132 opt: 338 Z-score: 344.0 bits: 70.5 E(32554): 7.7e-13 Smith-Waterman score: 338; 40.0% identity (67.3% similar) in 150 aa overlap (4-145:125-274) 10 20 30 pF1KE1 MAGELTPEEEAQYKKAFSAVDTDGNGTINAQEL :: ::: . . :: ::: .: :. .:: CCDS81 QSHRHRPDSLHDAAQRTYGPLLNRVFGKDRELGPEELDELQAAFEEFDTDRDGYISHREL 100 110 120 130 140 150 40 50 60 70 80 pF1KE1 GAALKATGKNLSEAQLRKLISEVDSDGDGEISFQEFLT-AAKKARA------GLEDLQVA : ... : .: .: .. ... :...:.::. . : : :...:..: CCDS81 GDCMRTLGYMPTEMELLEVSQHIKMRMGGRVDFEEFVELIGPKLREETAHMLGVRELRIA 160 170 180 190 200 210 90 100 110 120 130 140 pF1KE1 FRAFDQDGDGHITVDELRRAM-AGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLAQ :: ::.: ::.::: :::.:. : ::.:: ::: :.::.:.. :: :...::. ::.. CCDS81 FREFDRDRDGRITVAELREAVPALLGEPLAGPELDEMLREVDLNGDGTVDFDEFVMMLSR 220 230 240 250 260 270 pF1KE1 E CCDS81 H >>CCDS13375.1 TNNC2 gene_id:7125|Hs108|chr20 (160 aa) initn: 370 init1: 182 opt: 328 Z-score: 337.2 bits: 68.5 E(32554): 1.8e-12 Smith-Waterman score: 328; 35.2% identity (71.0% similar) in 145 aa overlap (5-143:12-156) 10 20 30 40 50 pF1KE1 MAGELTPEEEAQYKKAFSAVDTDGNGTINAQELGAALKATGKNLSEAQLRKLI :. : :..: ::. :.::.: :...:::.... :.. .. .: .: CCDS13 MTDQQAEARSYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAII 10 20 30 40 50 60 60 70 80 90 100 pF1KE1 SEVDSDGDGEISFQEFLTAA----KKARAGL--EDLQVAFRAFDQDGDGHITVDELRRAM ::: ::.: :.:.:::. :. : :.: :: ::...::.: .:: . . CCDS13 EEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDPEELAEIF 70 80 90 100 110 120 110 120 130 140 pF1KE1 AGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLAQE . :. . .::........: ..:::....:: .:. CCDS13 RASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMMEGVQ 130 140 150 160 146 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 15:35:51 2016 done: Sun Nov 6 15:35:51 2016 Total Scan time: 1.810 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]