FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1796, 313 aa 1>>>pF1KE1796 313 - 313 aa - 313 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.8752+/-0.00037; mu= 7.7167+/- 0.023 mean_var=243.8435+/-48.470, 0's: 0 Z-trim(122.1): 372 B-trim: 674 in 2/53 Lambda= 0.082133 statistics sampled from 39289 (39767) to 39289 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.769), E-opt: 0.2 (0.466), width: 16 Scan time: 8.280 The best scores are: opt bits E(85289) NP_004099 (OMIM: 601624) ficolin-2 isoform a precu ( 313) 2226 276.0 6.9e-74 XP_011516694 (OMIM: 601624) PREDICTED: ficolin-2 i ( 302) 2075 258.1 1.6e-68 XP_006717078 (OMIM: 601624) PREDICTED: ficolin-2 i ( 264) 1748 219.3 6.9e-57 NP_056652 (OMIM: 601624) ficolin-2 isoform b precu ( 275) 1748 219.3 7.1e-57 NP_001994 (OMIM: 601252) ficolin-1 precursor [Homo ( 326) 1422 180.8 3.4e-45 NP_003656 (OMIM: 604973,613860) ficolin-3 isoform ( 299) 1021 133.2 6.4e-31 NP_775628 (OMIM: 604973,613860) ficolin-3 isoform ( 288) 956 125.5 1.3e-28 NP_116232 (OMIM: 613357) fibrinogen C domain-conta ( 461) 802 107.5 5.5e-23 NP_001138578 (OMIM: 613357) fibrinogen C domain-co ( 461) 802 107.5 5.5e-23 NP_002395 (OMIM: 600596) microfibril-associated gl ( 255) 758 102.0 1.4e-21 NP_001185624 (OMIM: 600596) microfibril-associated ( 279) 758 102.0 1.5e-21 NP_001315564 (OMIM: 601995) tenascin-R isoform 2 [ (1025) 726 98.9 4.7e-20 XP_011508251 (OMIM: 601995) PREDICTED: tenascin-R (1199) 726 98.9 5.2e-20 NP_003276 (OMIM: 601995) tenascin-R isoform 1 prec (1358) 726 99.0 5.7e-20 XP_016857708 (OMIM: 601995) PREDICTED: tenascin-R (1358) 726 99.0 5.7e-20 XP_016857707 (OMIM: 601995) PREDICTED: tenascin-R (1358) 726 99.0 5.7e-20 NP_115859 (OMIM: 600985,606408,615963) tenascin-X ( 673) 681 93.3 1.5e-18 NP_036230 (OMIM: 605001) angiopoietin-related prot ( 493) 670 91.9 2.9e-18 NP_061978 (OMIM: 600985,606408,615963) tenascin-X (4242) 681 94.3 4.8e-18 XP_005252032 (OMIM: 187380,615629) PREDICTED: tena (1564) 667 92.1 7.9e-18 XP_005252031 (OMIM: 187380,615629) PREDICTED: tena (1655) 667 92.1 8.2e-18 XP_006717164 (OMIM: 187380,615629) PREDICTED: tena (1655) 667 92.1 8.2e-18 XP_011516931 (OMIM: 187380,615629) PREDICTED: tena (1746) 667 92.1 8.5e-18 XP_011516930 (OMIM: 187380,615629) PREDICTED: tena (1746) 667 92.1 8.5e-18 XP_005252030 (OMIM: 187380,615629) PREDICTED: tena (1837) 667 92.2 8.8e-18 XP_011516928 (OMIM: 187380,615629) PREDICTED: tena (1929) 667 92.2 9.1e-18 XP_006717161 (OMIM: 187380,615629) PREDICTED: tena (2019) 667 92.2 9.3e-18 XP_011516927 (OMIM: 187380,615629) PREDICTED: tena (2019) 667 92.2 9.3e-18 XP_016870170 (OMIM: 187380,615629) PREDICTED: tena (2020) 667 92.2 9.3e-18 XP_005252029 (OMIM: 187380,615629) PREDICTED: tena (2110) 667 92.2 9.6e-18 XP_006717160 (OMIM: 187380,615629) PREDICTED: tena (2110) 667 92.2 9.6e-18 NP_002151 (OMIM: 187380,615629) tenascin precursor (2201) 667 92.3 9.9e-18 XP_016870169 (OMIM: 187380,615629) PREDICTED: tena (2292) 667 92.3 1e-17 XP_006717159 (OMIM: 187380,615629) PREDICTED: tena (2293) 667 92.3 1e-17 XP_016870168 (OMIM: 187380,615629) PREDICTED: tena (2293) 667 92.3 1e-17 XP_016870167 (OMIM: 187380,615629) PREDICTED: tena (2384) 667 92.3 1e-17 NP_004664 (OMIM: 603874) angiopoietin-related prot ( 491) 652 89.7 1.3e-17 XP_005245634 (OMIM: 603874) PREDICTED: angiopoieti ( 491) 652 89.7 1.3e-17 NP_001300980 (OMIM: 601667) angiopoietin-1 isoform ( 298) 620 85.7 1.3e-16 NP_001186788 (OMIM: 601667) angiopoietin-1 isoform ( 497) 620 85.9 1.8e-16 NP_001137 (OMIM: 601667) angiopoietin-1 isoform 1 ( 498) 620 85.9 1.8e-16 NP_001308340 (OMIM: 609336) angiopoietin-related p ( 470) 604 84.0 6.4e-16 XP_011526649 (OMIM: 609336) PREDICTED: angiopoieti ( 470) 604 84.0 6.4e-16 XP_016882836 (OMIM: 609336) PREDICTED: angiopoieti ( 470) 604 84.0 6.4e-16 XP_011526652 (OMIM: 609336) PREDICTED: angiopoieti ( 470) 604 84.0 6.4e-16 NP_114123 (OMIM: 609336) angiopoietin-related prot ( 470) 604 84.0 6.4e-16 XP_011526651 (OMIM: 609336) PREDICTED: angiopoieti ( 537) 604 84.1 7e-16 XP_011526650 (OMIM: 609336) PREDICTED: angiopoieti ( 537) 604 84.1 7e-16 XP_005260148 (OMIM: 609336) PREDICTED: angiopoieti ( 551) 604 84.1 7.1e-16 XP_016868807 (OMIM: 601922) PREDICTED: angiopoieti ( 443) 569 79.8 1.1e-14 >>NP_004099 (OMIM: 601624) ficolin-2 isoform a precursor (313 aa) initn: 2226 init1: 2226 opt: 2226 Z-score: 1447.5 bits: 276.0 E(85289): 6.9e-74 Smith-Waterman score: 2226; 100.0% identity (100.0% similar) in 313 aa overlap (1-313:1-313) 10 20 30 40 50 60 pF1KE1 MELDRAVGVLGAATLLLSFLGMAWALQAADTCPEVKMVGLEGSDKLTILRGCPGLPGAPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 MELDRAVGVLGAATLLLSFLGMAWALQAADTCPEVKMVGLEGSDKLTILRGCPGLPGAPG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 PKGEAGTNGKRGERGPPGPPGKAGPPGPNGAPGEPQPCLTGPRTCKDLLDRGHFLSGWHT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 PKGEAGTNGKRGERGPPGPPGKAGPPGPNGAPGEPQPCLTGPRTCKDLLDRGHFLSGWHT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 IYLPDCRPLTVLCDMDTDGGGWTVFQRRVDGSVDFYRDWATYKQGFGSRLGEFWLGNDNI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 IYLPDCRPLTVLCDMDTDGGGWTVFQRRVDGSVDFYRDWATYKQGFGSRLGEFWLGNDNI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 HALTAQGTSELRVDLVDFEDNYQFAKYRSFKVADEAEKYNLVLGAFVEGSAGDSLTFHNN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 HALTAQGTSELRVDLVDFEDNYQFAKYRSFKVADEAEKYNLVLGAFVEGSAGDSLTFHNN 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 QSFSTKDQDNDLNTGNCAVMFQGAWWYKNCHVSNLNGRYLRGTHGSFANGINWKSGKGYN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 QSFSTKDQDNDLNTGNCAVMFQGAWWYKNCHVSNLNGRYLRGTHGSFANGINWKSGKGYN 250 260 270 280 290 300 310 pF1KE1 YSYKVSEMKVRPA ::::::::::::: NP_004 YSYKVSEMKVRPA 310 >>XP_011516694 (OMIM: 601624) PREDICTED: ficolin-2 isofo (302 aa) initn: 2047 init1: 2047 opt: 2075 Z-score: 1351.0 bits: 258.1 E(85289): 1.6e-68 Smith-Waterman score: 2075; 95.7% identity (97.0% similar) in 305 aa overlap (10-313:1-302) 10 20 30 40 50 pF1KE1 MELDRAVGVLGAATLLLSFLGMAWALQ-AADTCPEVKMVGLEGSDKLTILRGCPGLPGAP .: : : :::: :.. . :::::::::::::::::::::::::::::: XP_011 MGPALLALSFL---WTMALTEDTCPEVKMVGLEGSDKLTILRGCPGLPGAP 10 20 30 40 60 70 80 90 100 110 pF1KE1 GPKGEAGTNGKRGERGPPGPPGKAGPPGPNGAPGEPQPCLTGPRTCKDLLDRGHFLSGWH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 GPKGEAGTNGKRGERGPPGPPGKAGPPGPNGAPGEPQPCLTGPRTCKDLLDRGHFLSGWH 50 60 70 80 90 100 120 130 140 150 160 170 pF1KE1 TIYLPDCRPLTVLCDMDTDGGGWTVFQRRVDGSVDFYRDWATYKQGFGSRLGEFWLGNDN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 TIYLPDCRPLTVLCDMDTDGGGWTVFQRRVDGSVDFYRDWATYKQGFGSRLGEFWLGNDN 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE1 IHALTAQGTSELRVDLVDFEDNYQFAKYRSFKVADEAEKYNLVLGAFVEGSAGDSLTFHN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 IHALTAQGTSELRVDLVDFEDNYQFAKYRSFKVADEAEKYNLVLGAFVEGSAGDSLTFHN 170 180 190 200 210 220 240 250 260 270 280 290 pF1KE1 NQSFSTKDQDNDLNTGNCAVMFQGAWWYKNCHVSNLNGRYLRGTHGSFANGINWKSGKGY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 NQSFSTKDQDNDLNTGNCAVMFQGAWWYKNCHVSNLNGRYLRGTHGSFANGINWKSGKGY 230 240 250 260 270 280 300 310 pF1KE1 NYSYKVSEMKVRPA :::::::::::::: XP_011 NYSYKVSEMKVRPA 290 300 >>XP_006717078 (OMIM: 601624) PREDICTED: ficolin-2 isofo (264 aa) initn: 1748 init1: 1748 opt: 1748 Z-score: 1142.3 bits: 219.3 E(85289): 6.9e-57 Smith-Waterman score: 1748; 100.0% identity (100.0% similar) in 242 aa overlap (72-313:23-264) 50 60 70 80 90 100 pF1KE1 GSDKLTILRGCPGLPGAPGPKGEAGTNGKRGERGPPGPPGKAGPPGPNGAPGEPQPCLTG :::::::::::::::::::::::::::::: XP_006 MGPALLALSFLWTMALTEDTCPGERGPPGPPGKAGPPGPNGAPGEPQPCLTG 10 20 30 40 50 110 120 130 140 150 160 pF1KE1 PRTCKDLLDRGHFLSGWHTIYLPDCRPLTVLCDMDTDGGGWTVFQRRVDGSVDFYRDWAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 PRTCKDLLDRGHFLSGWHTIYLPDCRPLTVLCDMDTDGGGWTVFQRRVDGSVDFYRDWAT 60 70 80 90 100 110 170 180 190 200 210 220 pF1KE1 YKQGFGSRLGEFWLGNDNIHALTAQGTSELRVDLVDFEDNYQFAKYRSFKVADEAEKYNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 YKQGFGSRLGEFWLGNDNIHALTAQGTSELRVDLVDFEDNYQFAKYRSFKVADEAEKYNL 120 130 140 150 160 170 230 240 250 260 270 280 pF1KE1 VLGAFVEGSAGDSLTFHNNQSFSTKDQDNDLNTGNCAVMFQGAWWYKNCHVSNLNGRYLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 VLGAFVEGSAGDSLTFHNNQSFSTKDQDNDLNTGNCAVMFQGAWWYKNCHVSNLNGRYLR 180 190 200 210 220 230 290 300 310 pF1KE1 GTHGSFANGINWKSGKGYNYSYKVSEMKVRPA :::::::::::::::::::::::::::::::: XP_006 GTHGSFANGINWKSGKGYNYSYKVSEMKVRPA 240 250 260 >>NP_056652 (OMIM: 601624) ficolin-2 isoform b precursor (275 aa) initn: 1949 init1: 1748 opt: 1748 Z-score: 1142.1 bits: 219.3 E(85289): 7.1e-57 Smith-Waterman score: 1877; 87.9% identity (87.9% similar) in 313 aa overlap (1-313:1-275) 10 20 30 40 50 60 pF1KE1 MELDRAVGVLGAATLLLSFLGMAWALQAADTCPEVKMVGLEGSDKLTILRGCPGLPGAPG ::::::::::::::::::::::::::::::::: NP_056 MELDRAVGVLGAATLLLSFLGMAWALQAADTCP--------------------------- 10 20 30 70 80 90 100 110 120 pF1KE1 PKGEAGTNGKRGERGPPGPPGKAGPPGPNGAPGEPQPCLTGPRTCKDLLDRGHFLSGWHT ::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 -----------GERGPPGPPGKAGPPGPNGAPGEPQPCLTGPRTCKDLLDRGHFLSGWHT 40 50 60 70 80 130 140 150 160 170 180 pF1KE1 IYLPDCRPLTVLCDMDTDGGGWTVFQRRVDGSVDFYRDWATYKQGFGSRLGEFWLGNDNI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 IYLPDCRPLTVLCDMDTDGGGWTVFQRRVDGSVDFYRDWATYKQGFGSRLGEFWLGNDNI 90 100 110 120 130 140 190 200 210 220 230 240 pF1KE1 HALTAQGTSELRVDLVDFEDNYQFAKYRSFKVADEAEKYNLVLGAFVEGSAGDSLTFHNN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 HALTAQGTSELRVDLVDFEDNYQFAKYRSFKVADEAEKYNLVLGAFVEGSAGDSLTFHNN 150 160 170 180 190 200 250 260 270 280 290 300 pF1KE1 QSFSTKDQDNDLNTGNCAVMFQGAWWYKNCHVSNLNGRYLRGTHGSFANGINWKSGKGYN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 QSFSTKDQDNDLNTGNCAVMFQGAWWYKNCHVSNLNGRYLRGTHGSFANGINWKSGKGYN 210 220 230 240 250 260 310 pF1KE1 YSYKVSEMKVRPA ::::::::::::: NP_056 YSYKVSEMKVRPA 270 >>NP_001994 (OMIM: 601252) ficolin-1 precursor [Homo sap (326 aa) initn: 1420 init1: 1420 opt: 1422 Z-score: 932.5 bits: 180.8 E(85289): 3.4e-45 Smith-Waterman score: 1719; 77.0% identity (86.8% similar) in 326 aa overlap (1-313:1-326) 10 20 30 40 50 pF1KE1 MELDRAVGVLGAATLLLSFLGMA-WALQAADTCPEVKMVGLEGSDKLTILRGCPGLPGAP :::. :. . : :.::. :: . ::::::::::.:::::::::::::::::::::: NP_001 MELSGATMARGLAVLLVLFLHIKNLPAQAADTCPEVKVVGLEGSDKLTILRGCPGLPGAP 10 20 30 40 50 60 60 70 80 90 100 pF1KE1 GPKGEAGTNGKRGERGPPGPPGKAGPPGPNGAPGEP------------QPCLTGPRTCKD :::::::. :.::::: :: :::::: ::.: :: : : ::::.::: NP_001 GPKGEAGVIGERGERGLPGAPGKAGPVGPKGDRGEKGMRGEKGDAGQSQSCATGPRNCKD 70 80 90 100 110 120 110 120 130 140 150 160 pF1KE1 LLDRGHFLSGWHTIYLPDCRPLTVLCDMDTDGGGWTVFQRRVDGSVDFYRDWATYKQGFG :::::.:::::::::::::::::::::::::::::::::::.:::::::::::.:::::: NP_001 LLDRGYFLSGWHTIYLPDCRPLTVLCDMDTDGGGWTVFQRRMDGSVDFYRDWAAYKQGFG 130 140 150 160 170 180 170 180 190 200 210 220 pF1KE1 SRLGEFWLGNDNIHALTAQGTSELRVDLVDFEDNYQFAKYRSFKVADEAEKYNLVLGAFV :.::::::::::::::::::.::::::::::: :.:::::.:::::::::::.::::::: NP_001 SQLGEFWLGNDNIHALTAQGSSELRVDLVDFEGNHQFAKYKSFKVADEAEKYKLVLGAFV 190 200 210 220 230 240 230 240 250 260 270 280 pF1KE1 EGSAGDSLTFHNNQSFSTKDQDNDLNTGNCAVMFQGAWWYKNCHVSNLNGRYLRGTHGSF ::::.::: :::. :::::::::....::: ::::::: .::.::::: :: : : :. NP_001 GGSAGNSLTGHNNNFFSTKDQDNDVSSSNCAEKFQGAWWYADCHASNLNGLYLMGPHESY 250 260 270 280 290 300 290 300 310 pF1KE1 ANGINWKSGKGYNYSYKVSEMKVRPA ::::::...:::.::::::::::::: NP_001 ANGINWSAAKGYKYSYKVSEMKVRPA 310 320 >>NP_003656 (OMIM: 604973,613860) ficolin-3 isoform 1 pr (299 aa) initn: 1213 init1: 990 opt: 1021 Z-score: 676.1 bits: 133.2 E(85289): 6.4e-31 Smith-Waterman score: 1034; 49.0% identity (73.0% similar) in 300 aa overlap (14-311:9-299) 10 20 30 40 50 pF1KE1 MELDRAVGVLGAATLLLSFLGMAWALQAAD--TCPEVKMVGLEGSDKLTILRGCPGLPGA .: : .:: :.. . .:: . ::.: :...: .::: ::. NP_003 MDLLWILPSLWLLLLGGPACLKTQEHPSCPGPRE--LEAS-KVVLLPSCPGAPGS 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 PGPKGEAGTNGKRGERGPPGPPGKAGPPGPNGAPGEPQPCLTGPRTCKDLLDRGHFLSGW :: :: : .:::::::: :: : : : . : :::.:..::..: :::: NP_003 PGEKGAPGP------QGPPGPPGKMGPKGEPGDPVNLLRCQEGPRNCRELLSQGATLSGW 60 70 80 90 100 120 130 140 150 160 170 pF1KE1 HTIYLPDCRPLTVLCDMDTDGGGWTVFQRRVDGSVDFYRDWATYKQGFGSRLGEFWLGND . . ::. : : :.:::::.:::: ::::: ::::::.:.:..:. :::.. .::::::. NP_003 YHLCLPEGRALPVFCDMDTEGGGWLVFQRRQDGSVDFFRSWSSYRAGFGNQESEFWLGNE 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE1 NIHALTAQGTSELRVDLVDFEDNYQFAKYRSFKVADEAEKYNLVLGAFVEGSAGDSLTFH :.: :: ::. ::::.: ::. : ::.: .:.. :...:.:.:: : ::.:::::..: NP_003 NLHQLTLQGNWELRVELEDFNGNRTFAHYATFRLLGEVDHYQLALGKFSEGTAGDSLSLH 170 180 190 200 210 220 240 250 260 270 280 290 pF1KE1 NNQSFSTKDQDNDLNTGNCAVMFQGAWWYKNCHVSNLNGRYLRGTHGSFANGINWKSGKG ... :.: : :.: ...::::. .::::: .:. ::::::: . .. ::.: ::.: NP_003 SGRPFTTYDADHDSSNSNCAVIVHGAWWYASCYRSNLNGRYAVSEAAAHKYGIDWASGRG 230 240 250 260 270 280 300 310 pF1KE1 YNYSYKVSEMKVRPA .. :. .: .: NP_003 VGHPYRRVRMMLR 290 >>NP_775628 (OMIM: 604973,613860) ficolin-3 isoform 2 pr (288 aa) initn: 971 init1: 831 opt: 956 Z-score: 634.7 bits: 125.5 E(85289): 1.3e-28 Smith-Waterman score: 998; 48.7% identity (72.3% similar) in 300 aa overlap (14-311:9-288) 10 20 30 40 50 pF1KE1 MELDRAVGVLGAATLLLSFLGMAWALQAAD--TCPEVKMVGLEGSDKLTILRGCPGLPGA .: : .:: :.. . .:: . ::.: :...: .::: ::. NP_775 MDLLWILPSLWLLLLGGPACLKTQEHPSCPGPRE--LEAS-KVVLLPSCPGAPGS 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 PGPKGEAGTNGKRGERGPPGPPGKAGPPGPNGAPGEPQPCLTGPRTCKDLLDRGHFLSGW :: :: : .:::::::: :: : :: :::.:..::..: :::: NP_775 PGEKGAPGP------QGPPGPPGKMGPKG------EP-----GPRNCRELLSQGATLSGW 60 70 80 90 120 130 140 150 160 170 pF1KE1 HTIYLPDCRPLTVLCDMDTDGGGWTVFQRRVDGSVDFYRDWATYKQGFGSRLGEFWLGND . . ::. : : :.:::::.:::: ::::: ::::::.:.:..:. :::.. .::::::. NP_775 YHLCLPEGRALPVFCDMDTEGGGWLVFQRRQDGSVDFFRSWSSYRAGFGNQESEFWLGNE 100 110 120 130 140 150 180 190 200 210 220 230 pF1KE1 NIHALTAQGTSELRVDLVDFEDNYQFAKYRSFKVADEAEKYNLVLGAFVEGSAGDSLTFH :.: :: ::. ::::.: ::. : ::.: .:.. :...:.:.:: : ::.:::::..: NP_775 NLHQLTLQGNWELRVELEDFNGNRTFAHYATFRLLGEVDHYQLALGKFSEGTAGDSLSLH 160 170 180 190 200 210 240 250 260 270 280 290 pF1KE1 NNQSFSTKDQDNDLNTGNCAVMFQGAWWYKNCHVSNLNGRYLRGTHGSFANGINWKSGKG ... :.: : :.: ...::::. .::::: .:. ::::::: . .. ::.: ::.: NP_775 SGRPFTTYDADHDSSNSNCAVIVHGAWWYASCYRSNLNGRYAVSEAAAHKYGIDWASGRG 220 230 240 250 260 270 300 310 pF1KE1 YNYSYKVSEMKVRPA .. :. .: .: NP_775 VGHPYRRVRMMLR 280 >>NP_116232 (OMIM: 613357) fibrinogen C domain-containin (461 aa) initn: 787 init1: 391 opt: 802 Z-score: 533.7 bits: 107.5 E(85289): 5.5e-23 Smith-Waterman score: 802; 48.6% identity (71.9% similar) in 249 aa overlap (73-312:210-456) 50 60 70 80 90 100 pF1KE1 SDKLTILRGCPGLPGAPGPKGEAGTNGKRGERGPPGPPGKAGPPGPNGAPGEPQPCLTG- .:: : .:: . .:. : :: NP_116 GRLIQLLSESQGHMAHLVNSVSDILDALQRDRGLGRPRNKADLQRAPARGTRPRGCATGS 180 190 200 210 220 230 110 120 130 140 150 pF1KE1 -PRTCKDLLDRGHFLSGWHTIYLPDCRP--LTVLCDMDTDGGGWTVFQRRVDGSVDFYRD :: : :.: :. .: .... : : . : ::: :::::::::::: ::::.:.: NP_116 RPRDCLDVLLSGQQDDGVYSVF-PTHYPAGFQVYCDMRTDGGGWTVFQRREDGSVNFFRG 240 250 260 270 280 290 160 170 180 190 200 210 pF1KE1 WATYKQGFGSRLGEFWLGNDNIHALTAQGTSELRVDLVDFEDNYQFAKYRSFKVA----- : .:..::: :: ::: :::::.:.. ::.::: :::.. .:.: :: :. NP_116 WDAYRDGFGRLTGEHWLGLKRIHALTTQAAYELHVDLEDFENGTAYARYGSFGVGLFSVD 300 310 320 330 340 350 220 230 240 250 260 270 pF1KE1 DEAEKYNLVLGAFVEGSAGDSLTFHNNQSFSTKDQDNDLNTGNCAVMFQGAWWYKNCHVS : . : :... . :.::::: :... :.:::.:.: . .:::....:::::.:::.: NP_116 PEEDGYPLTVADY-SGTAGDSLLKHSGMRFTTKDRDSDHSENNCAAFYRGAWWYRNCHTS 360 370 380 390 400 410 280 290 300 310 pF1KE1 NLNGRYLRGTHGSFANGINWKSGKGYNYSYKVSEMKVRPA ::::.::::.:.:.:.:..:.: :..:: : ::::.:: NP_116 NLNGQYLRGAHASYADGVEWSSWTGWQYSLKFSEMKIRPVREDR 420 430 440 450 460 >>NP_001138578 (OMIM: 613357) fibrinogen C domain-contai (461 aa) initn: 787 init1: 391 opt: 802 Z-score: 533.7 bits: 107.5 E(85289): 5.5e-23 Smith-Waterman score: 802; 48.6% identity (71.9% similar) in 249 aa overlap (73-312:210-456) 50 60 70 80 90 100 pF1KE1 SDKLTILRGCPGLPGAPGPKGEAGTNGKRGERGPPGPPGKAGPPGPNGAPGEPQPCLTG- .:: : .:: . .:. : :: NP_001 GRLIQLLSESQGHMAHLVNSVSDILDALQRDRGLGRPRNKADLQRAPARGTRPRGCATGS 180 190 200 210 220 230 110 120 130 140 150 pF1KE1 -PRTCKDLLDRGHFLSGWHTIYLPDCRP--LTVLCDMDTDGGGWTVFQRRVDGSVDFYRD :: : :.: :. .: .... : : . : ::: :::::::::::: ::::.:.: NP_001 RPRDCLDVLLSGQQDDGVYSVF-PTHYPAGFQVYCDMRTDGGGWTVFQRREDGSVNFFRG 240 250 260 270 280 290 160 170 180 190 200 210 pF1KE1 WATYKQGFGSRLGEFWLGNDNIHALTAQGTSELRVDLVDFEDNYQFAKYRSFKVA----- : .:..::: :: ::: :::::.:.. ::.::: :::.. .:.: :: :. NP_001 WDAYRDGFGRLTGEHWLGLKRIHALTTQAAYELHVDLEDFENGTAYARYGSFGVGLFSVD 300 310 320 330 340 350 220 230 240 250 260 270 pF1KE1 DEAEKYNLVLGAFVEGSAGDSLTFHNNQSFSTKDQDNDLNTGNCAVMFQGAWWYKNCHVS : . : :... . :.::::: :... :.:::.:.: . .:::....:::::.:::.: NP_001 PEEDGYPLTVADY-SGTAGDSLLKHSGMRFTTKDRDSDHSENNCAAFYRGAWWYRNCHTS 360 370 380 390 400 410 280 290 300 310 pF1KE1 NLNGRYLRGTHGSFANGINWKSGKGYNYSYKVSEMKVRPA ::::.::::.:.:.:.:..:.: :..:: : ::::.:: NP_001 NLNGQYLRGAHASYADGVEWSSWTGWQYSLKFSEMKIRPVREDR 420 430 440 450 460 >>NP_002395 (OMIM: 600596) microfibril-associated glycop (255 aa) initn: 743 init1: 345 opt: 758 Z-score: 508.5 bits: 102.0 E(85289): 1.4e-21 Smith-Waterman score: 758; 46.9% identity (69.8% similar) in 245 aa overlap (76-313:16-255) 50 60 70 80 90 100 pF1KE1 LTILRGCPGLPGAPGPKGEAGTNGKRGERGPPGPPGKAGPPGPNGAPGEPQPCLTGPRTC :: : .: : . . :: : : NP_002 MKALLALPLLLLLSTPPCAPQVSGIRGD----ALERFCLQQPLDC 10 20 30 40 110 120 130 140 150 160 pF1KE1 KDLLDRGHFLSGWHTIYLPD--CRPLTVLCDMDTDGGGWTVFQRRVDGSVDFYRDWATYK :. .:. .: . :: :. :. :.::: :.:: :::::.: .:::.:.: : :: NP_002 DDIYAQGYQSDGVYLIY-PSGPSVPVPVFCDMTTEGGKWTVFQKRFNGSVSFFRGWNDYK 50 60 70 80 90 100 170 180 190 200 210 pF1KE1 QGFGSRLGEFWLGNDNIHALTAQGTSELRVDLVDFEDNYQFAKYRSFKVADEA-----EK ::: ::.::: .:.: :: . :::::: :::.: .::: .:... .: . NP_002 LGFGRADGEYWLGLQNMHLLTLKQKYELRVDLEDFENNTAYAKYADFSISPNAVSAEEDG 110 120 130 140 150 160 220 230 240 250 260 270 pF1KE1 YNLVLGAFVEGSAGDSLTFHNNQSFSTKDQDNDLNTGNCAVMFQGAWWYKNCHVSNLNGR :.: ...: .:.:::::..:..:.::: :.:.:: . :::.. .::.:...:: .:::: NP_002 YTLFVAGFEDGGAGDSLSYHSGQKFSTFDRDQDLFVQNCAALSSGAFWFRSCHFANLNGF 170 180 190 200 210 220 280 290 300 310 pF1KE1 YLRGTHGSFANGINWKSGKGYNYSYKVSEMKVRPA :: :.: :.:::::: . ::. :: : .:::.: : NP_002 YLGGSHLSYANGINWAQWKGFYYSLKRTEMKIRRA 230 240 250 313 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 15:39:11 2016 done: Sun Nov 6 15:39:12 2016 Total Scan time: 8.280 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]