FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3108, 277 aa 1>>>pF1KE3108 277 - 277 aa - 277 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0119+/-0.000329; mu= 17.0457+/- 0.021 mean_var=66.6700+/-13.322, 0's: 0 Z-trim(115.2): 39 B-trim: 0 in 0/54 Lambda= 0.157076 statistics sampled from 25417 (25456) to 25417 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.672), E-opt: 0.2 (0.298), width: 16 Scan time: 6.650 The best scores are: opt bits E(85289) NP_113620 (OMIM: 609328) uridine-cytidine kinase 1 ( 277) 1856 429.1 4.3e-120 NP_001248380 (OMIM: 609328) uridine-cytidine kinas ( 282) 1773 410.3 2e-114 XP_005272281 (OMIM: 609328) PREDICTED: uridine-cyt ( 291) 1606 372.5 5e-103 NP_001248379 (OMIM: 609328) uridine-cytidine kinas ( 268) 1604 372.0 6.4e-103 NP_036606 (OMIM: 609329) uridine-cytidine kinase 2 ( 261) 1191 278.4 9.4e-75 NP_001129426 (OMIM: 609328) uridine-cytidine kinas ( 201) 1115 261.1 1.2e-69 XP_016857725 (OMIM: 609329) PREDICTED: uridine-cyt ( 240) 1095 256.7 3.1e-68 NP_001305448 (OMIM: 609328) uridine-cytidine kinas ( 254) 904 213.4 3.5e-55 XP_016883389 (OMIM: 610866) PREDICTED: uridine-cyt ( 533) 702 167.8 3.8e-41 XP_016883387 (OMIM: 610866) PREDICTED: uridine-cyt ( 548) 702 167.8 3.9e-41 XP_016883385 (OMIM: 610866) PREDICTED: uridine-cyt ( 549) 702 167.8 3.9e-41 XP_016883390 (OMIM: 610866) PREDICTED: uridine-cyt ( 532) 694 166.0 1.3e-40 NP_001180308 (OMIM: 610866) uridine-cytidine kinas ( 533) 694 166.0 1.3e-40 XP_016883388 (OMIM: 610866) PREDICTED: uridine-cyt ( 547) 694 166.0 1.4e-40 NP_060329 (OMIM: 610866) uridine-cytidine kinase-l ( 548) 694 166.0 1.4e-40 XP_016883386 (OMIM: 610866) PREDICTED: uridine-cyt ( 549) 694 166.0 1.4e-40 XP_006723873 (OMIM: 610866) PREDICTED: uridine-cyt ( 549) 694 166.0 1.4e-40 XP_006723872 (OMIM: 610866) PREDICTED: uridine-cyt ( 550) 694 166.0 1.4e-40 XP_006723870 (OMIM: 610866) PREDICTED: uridine-cyt ( 557) 676 162.0 2.3e-39 XP_016883383 (OMIM: 610866) PREDICTED: uridine-cyt ( 558) 671 160.8 5.1e-39 XP_011527175 (OMIM: 610866) PREDICTED: uridine-cyt ( 361) 668 160.0 5.8e-39 XP_006723874 (OMIM: 610866) PREDICTED: uridine-cyt ( 542) 668 160.1 8e-39 XP_011527170 (OMIM: 610866) PREDICTED: uridine-cyt ( 543) 668 160.1 8e-39 XP_005260273 (OMIM: 610866) PREDICTED: uridine-cyt ( 556) 668 160.1 8.1e-39 XP_016883384 (OMIM: 610866) PREDICTED: uridine-cyt ( 557) 668 160.1 8.1e-39 XP_006723871 (OMIM: 610866) PREDICTED: uridine-cyt ( 557) 668 160.1 8.1e-39 XP_006723869 (OMIM: 610866) PREDICTED: uridine-cyt ( 558) 668 160.1 8.1e-39 XP_011508272 (OMIM: 609329) PREDICTED: uridine-cyt ( 208) 659 157.8 1.5e-38 XP_016883391 (OMIM: 610866) PREDICTED: uridine-cyt ( 434) 635 152.6 1.2e-36 XP_011527171 (OMIM: 610866) PREDICTED: uridine-cyt ( 442) 609 146.7 7.2e-35 XP_016883392 (OMIM: 610866) PREDICTED: uridine-cyt ( 430) 588 141.9 1.9e-33 XP_011527173 (OMIM: 610866) PREDICTED: uridine-cyt ( 432) 588 141.9 1.9e-33 XP_011527172 (OMIM: 610866) PREDICTED: uridine-cyt ( 432) 588 141.9 1.9e-33 XP_011527174 (OMIM: 610866) PREDICTED: uridine-cyt ( 432) 588 141.9 1.9e-33 XP_016883394 (OMIM: 610866) PREDICTED: uridine-cyt ( 340) 323 81.8 1.9e-15 XP_016883395 (OMIM: 610866) PREDICTED: uridine-cyt ( 340) 323 81.8 1.9e-15 XP_016883393 (OMIM: 610866) PREDICTED: uridine-cyt ( 342) 323 81.8 1.9e-15 XP_016883396 (OMIM: 610866) PREDICTED: uridine-cyt ( 329) 309 78.6 1.7e-14 XP_016883397 (OMIM: 610866) PREDICTED: uridine-cyt ( 329) 309 78.6 1.7e-14 >>NP_113620 (OMIM: 609328) uridine-cytidine kinase 1 iso (277 aa) initn: 1856 init1: 1856 opt: 1856 Z-score: 2277.1 bits: 429.1 E(85289): 4.3e-120 Smith-Waterman score: 1856; 100.0% identity (100.0% similar) in 277 aa overlap (1-277:1-277) 10 20 30 40 50 60 pF1KE3 MASAGGEDCESPAPEADRPHQRPFLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_113 MASAGGEDCESPAPEADRPHQRPFLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 ILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTYDFVTH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_113 ILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTYDFVTH 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 SRLPETTVVYPADVVLFEGILVFYSQEIRDMFHLRLFVDTDSDVRLSRRVLRDVRRGRDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_113 SRLPETTVVYPADVVLFEGILVFYSQEIRDMFHLRLFVDTDSDVRLSRRVLRDVRRGRDL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 EQILTQYTTFVKPAFEEFCLPTKKYADVIIPRGVDNMVAINLIVQHIQDILNGDICKWHR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_113 EQILTQYTTFVKPAFEEFCLPTKKYADVIIPRGVDNMVAINLIVQHIQDILNGDICKWHR 190 200 210 220 230 240 250 260 270 pF1KE3 GGSNGRSYKRTFSEPGDHPGMLTSGKRSHLESSSRPH ::::::::::::::::::::::::::::::::::::: NP_113 GGSNGRSYKRTFSEPGDHPGMLTSGKRSHLESSSRPH 250 260 270 >>NP_001248380 (OMIM: 609328) uridine-cytidine kinase 1 (282 aa) initn: 1789 init1: 1606 opt: 1773 Z-score: 2175.3 bits: 410.3 E(85289): 2e-114 Smith-Waterman score: 1773; 95.4% identity (96.5% similar) in 282 aa overlap (1-277:1-282) 10 20 30 40 50 pF1KE3 MASAGGEDCESPAPEADRPHQRPFLIG---VSGGTA--SGKSTVCEKIMELLGQNEVEQR ::::::::::::::::::::::::::: ..: .::::::::::::::::::: NP_001 MASAGGEDCESPAPEADRPHQRPFLIGDERFQAGIPLLCLQSTVCEKIMELLGQNEVEQR 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE3 QRKVVILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QRKVVILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTY 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE3 DFVTHSRLPETTVVYPADVVLFEGILVFYSQEIRDMFHLRLFVDTDSDVRLSRRVLRDVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DFVTHSRLPETTVVYPADVVLFEGILVFYSQEIRDMFHLRLFVDTDSDVRLSRRVLRDVR 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE3 RGRDLEQILTQYTTFVKPAFEEFCLPTKKYADVIIPRGVDNMVAINLIVQHIQDILNGDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RGRDLEQILTQYTTFVKPAFEEFCLPTKKYADVIIPRGVDNMVAINLIVQHIQDILNGDI 190 200 210 220 230 240 240 250 260 270 pF1KE3 CKWHRGGSNGRSYKRTFSEPGDHPGMLTSGKRSHLESSSRPH :::::::::::::::::::::::::::::::::::::::::: NP_001 CKWHRGGSNGRSYKRTFSEPGDHPGMLTSGKRSHLESSSRPH 250 260 270 280 >>XP_005272281 (OMIM: 609328) PREDICTED: uridine-cytidin (291 aa) initn: 1606 init1: 1606 opt: 1606 Z-score: 1970.6 bits: 372.5 E(85289): 5e-103 Smith-Waterman score: 1818; 95.2% identity (95.2% similar) in 291 aa overlap (1-277:1-291) 10 20 30 40 pF1KE3 MASAGGEDCESPAPEADRPHQRPFLIGVSGGTASGK--------------STVCEKIMEL :::::::::::::::::::::::::::::::::::: :::::::::: XP_005 MASAGGEDCESPAPEADRPHQRPFLIGVSGGTASGKDERFQAGIPLLCLQSTVCEKIMEL 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE3 LGQNEVEQRQRKVVILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 LGQNEVEQRQRKVVILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVE 70 80 90 100 110 120 110 120 130 140 150 160 pF1KE3 GKTVEVPTYDFVTHSRLPETTVVYPADVVLFEGILVFYSQEIRDMFHLRLFVDTDSDVRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 GKTVEVPTYDFVTHSRLPETTVVYPADVVLFEGILVFYSQEIRDMFHLRLFVDTDSDVRL 130 140 150 160 170 180 170 180 190 200 210 220 pF1KE3 SRRVLRDVRRGRDLEQILTQYTTFVKPAFEEFCLPTKKYADVIIPRGVDNMVAINLIVQH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 SRRVLRDVRRGRDLEQILTQYTTFVKPAFEEFCLPTKKYADVIIPRGVDNMVAINLIVQH 190 200 210 220 230 240 230 240 250 260 270 pF1KE3 IQDILNGDICKWHRGGSNGRSYKRTFSEPGDHPGMLTSGKRSHLESSSRPH ::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 IQDILNGDICKWHRGGSNGRSYKRTFSEPGDHPGMLTSGKRSHLESSSRPH 250 260 270 280 290 >>NP_001248379 (OMIM: 609328) uridine-cytidine kinase 1 (268 aa) initn: 1787 init1: 1604 opt: 1604 Z-score: 1968.7 bits: 372.0 E(85289): 6.4e-103 Smith-Waterman score: 1773; 96.8% identity (96.8% similar) in 277 aa overlap (1-277:1-268) 10 20 30 40 50 60 pF1KE3 MASAGGEDCESPAPEADRPHQRPFLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVV ::::::::::::::::::::::::::: :::::::::::::::::::::::: NP_001 MASAGGEDCESPAPEADRPHQRPFLIG---------STVCEKIMELLGQNEVEQRQRKVV 10 20 30 40 50 70 80 90 100 110 120 pF1KE3 ILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTYDFVTH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTYDFVTH 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE3 SRLPETTVVYPADVVLFEGILVFYSQEIRDMFHLRLFVDTDSDVRLSRRVLRDVRRGRDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SRLPETTVVYPADVVLFEGILVFYSQEIRDMFHLRLFVDTDSDVRLSRRVLRDVRRGRDL 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE3 EQILTQYTTFVKPAFEEFCLPTKKYADVIIPRGVDNMVAINLIVQHIQDILNGDICKWHR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EQILTQYTTFVKPAFEEFCLPTKKYADVIIPRGVDNMVAINLIVQHIQDILNGDICKWHR 180 190 200 210 220 230 250 260 270 pF1KE3 GGSNGRSYKRTFSEPGDHPGMLTSGKRSHLESSSRPH ::::::::::::::::::::::::::::::::::::: NP_001 GGSNGRSYKRTFSEPGDHPGMLTSGKRSHLESSSRPH 240 250 260 >>NP_036606 (OMIM: 609329) uridine-cytidine kinase 2 [Ho (261 aa) initn: 1208 init1: 808 opt: 1191 Z-score: 1463.0 bits: 278.4 E(85289): 9.4e-75 Smith-Waterman score: 1195; 69.5% identity (85.3% similar) in 272 aa overlap (8-277:4-261) 10 20 30 40 50 pF1KE3 MASAGGEDCESPAPEADRPHQ-RPFLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKV : :. . ..:. .:::::::::::::::.:: ::..:::::::. ::..: NP_036 MAGDSEQTLQNHQQPNGGEPFLIGVSGGTASGKSSVCAKIVQLLGQNEVDYRQKQV 10 20 30 40 50 60 70 80 90 100 110 pF1KE3 VILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTYDFVT :::::: ::.:::.::::::::::.::::::::::.:. .:::.:.:::::..:.::::. NP_036 VILSQDSFYRVLTSEQKAKALKGQFNFDHPDAFDNELILKTLKEITEGKTVQIPVYDFVS 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE3 HSRLPETTVVYPADVVLFEGILVFYSQEIRDMFHLRLFVDTDSDVRLSRRVLRDV-RRGR ::: ::..:::::::::::::.:::::.::.:...::::::.:.:::::::::. .::: NP_036 HSRKEETVTVYPADVVLFEGILAFYSQEVRDLFQMKLFVDTDADTRLSRRVLRDISERGR 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE3 DLEQILTQYTTFVKPAFEEFCLPTKKYADVIIPRGVDNMVAINLIVQHIQDILNGDICKW ::::::.:: :::::::::::::::::::::::::.::.:::::::::::::::: NP_036 DLEQILSQYITFVKPAFEEFCLPTKKYADVIIPRGADNLVAINLIVQHIQDILNG----- 180 190 200 210 220 230 240 250 260 270 pF1KE3 HRGGSNGRSYKRTFSEPGDHPGMLTSGKRSHLESSSRPH : : ..: : :. : ::. ::::::: NP_036 ------GPSKRQT---NGCLNGYTPSRKRQASESSSRPH 240 250 260 >>NP_001129426 (OMIM: 609328) uridine-cytidine kinase 1 (201 aa) initn: 1115 init1: 1115 opt: 1115 Z-score: 1371.6 bits: 261.1 E(85289): 1.2e-69 Smith-Waterman score: 1115; 100.0% identity (100.0% similar) in 169 aa overlap (1-169:1-169) 10 20 30 40 50 60 pF1KE3 MASAGGEDCESPAPEADRPHQRPFLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MASAGGEDCESPAPEADRPHQRPFLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 ILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTYDFVTH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTYDFVTH 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 SRLPETTVVYPADVVLFEGILVFYSQEIRDMFHLRLFVDTDSDVRLSRRVLRDVRRGRDL ::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SRLPETTVVYPADVVLFEGILVFYSQEIRDMFHLRLFVDTDSDVRLSRRDKEVCRCDHPA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 EQILTQYTTFVKPAFEEFCLPTKKYADVIIPRGVDNMVAINLIVQHIQDILNGDICKWHR NP_001 RSGQYGCHQPDRAAHPGHSEW 190 200 >>XP_016857725 (OMIM: 609329) PREDICTED: uridine-cytidin (240 aa) initn: 1110 init1: 710 opt: 1095 Z-score: 1346.0 bits: 256.7 E(85289): 3.1e-68 Smith-Waterman score: 1099; 71.1% identity (86.4% similar) in 242 aa overlap (37-277:13-240) 10 20 30 40 50 60 pF1KE3 EDCESPAPEADRPHQRPFLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVVILSQDR :.:: ::..:::::::. ::..::::::: XP_016 MELNEIMSSECHSSVCAKIVQLLGQNEVDYRQKQVVILSQDS 10 20 30 40 70 80 90 100 110 120 pF1KE3 FYKVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTYDFVTHSRLPET ::.:::.::::::::::.::::::::::.:. .:::.:.:::::..:.::::.::: :: XP_016 FYRVLTSEQKAKALKGQFNFDHPDAFDNELILKTLKEITEGKTVQIPVYDFVSHSRKEET 50 60 70 80 90 100 130 140 150 160 170 180 pF1KE3 TVVYPADVVLFEGILVFYSQEIRDMFHLRLFVDTDSDVRLSRRVLRDV-RRGRDLEQILT ..:::::::::::::.:::::.::.:...::::::.:.:::::::::. .:::::::::. XP_016 VTVYPADVVLFEGILAFYSQEVRDLFQMKLFVDTDADTRLSRRVLRDISERGRDLEQILS 110 120 130 140 150 160 190 200 210 220 230 240 pF1KE3 QYTTFVKPAFEEFCLPTKKYADVIIPRGVDNMVAINLIVQHIQDILNGDICKWHRGGSNG :: :::::::::::::::::::::::::.::.:::::::::::::::: : XP_016 QYITFVKPAFEEFCLPTKKYADVIIPRGADNLVAINLIVQHIQDILNG-----------G 170 180 190 200 210 250 260 270 pF1KE3 RSYKRTFSEPGDHPGMLTSGKRSHLESSSRPH : ..: : :. : ::. ::::::: XP_016 PSKRQT---NGCLNGYTPSRKRQASESSSRPH 220 230 240 >>NP_001305448 (OMIM: 609328) uridine-cytidine kinase 1 (254 aa) initn: 1695 init1: 904 opt: 904 Z-score: 1111.7 bits: 213.4 E(85289): 3.5e-55 Smith-Waterman score: 1653; 91.7% identity (91.7% similar) in 277 aa overlap (1-277:1-254) 10 20 30 40 50 60 pF1KE3 MASAGGEDCESPAPEADRPHQRPFLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MASAGGEDCESPAPEADRPHQRPFLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 ILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTYDFVTH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTYDFVTH 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 SRLPETTVVYPADVVLFEGILVFYSQEIRDMFHLRLFVDTDSDVRLSRRVLRDVRRGRDL : :::::::::::::::::::::::::::::::::::: NP_001 S-----------------------SQEIRDMFHLRLFVDTDSDVRLSRRVLRDVRRGRDL 130 140 150 190 200 210 220 230 240 pF1KE3 EQILTQYTTFVKPAFEEFCLPTKKYADVIIPRGVDNMVAINLIVQHIQDILNGDICKWHR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EQILTQYTTFVKPAFEEFCLPTKKYADVIIPRGVDNMVAINLIVQHIQDILNGDICKWHR 160 170 180 190 200 210 250 260 270 pF1KE3 GGSNGRSYKRTFSEPGDHPGMLTSGKRSHLESSSRPH ::::::::::::::::::::::::::::::::::::: NP_001 GGSNGRSYKRTFSEPGDHPGMLTSGKRSHLESSSRPH 220 230 240 250 >>XP_016883389 (OMIM: 610866) PREDICTED: uridine-cytidin (533 aa) initn: 700 init1: 426 opt: 702 Z-score: 859.8 bits: 167.8 E(85289): 3.8e-41 Smith-Waterman score: 702; 47.9% identity (77.2% similar) in 219 aa overlap (21-238:80-291) 10 20 30 40 50 pF1KE3 MASAGGEDCESPAPEADRPHQRPFLIGVSGGTASGKSTVCEKIMELLGQN .. : ::..::.::::.:: . :.: : XP_016 KSEPPLLRTSKRTIYTAGRPPWYNEHGTQSKEAFAIGLGGGSASGKTTVARMIIEAL--- 50 60 70 80 90 100 60 70 80 90 100 110 pF1KE3 EVEQRQRKVVILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVEGKTV .: ::.::.: :::::: .:. .: ....::::::::: ::. :::.. .::.: XP_016 DVPW----VVLLSMDSFYKVLTEQQQEQAAHNNFNFDHPDAFDFDLIISTLKKLKQGKSV 110 120 130 140 150 160 120 130 140 150 160 170 pF1KE3 EVPTYDFVTHSRLPETTVVYPADVVLFEGILVFYSQEIRDMFHLRLFVDTDSDVRLSRRV .:: :::.:::: . ..: :.:..::::..: .. . ... ...:::::::.:: ::. XP_016 KVPIYDFTTHSRKKDWKTLYGANVIIFEGIMAFADKTLLELLDMKIFVDTDSDIRLVRRL 170 180 190 200 210 220 180 190 200 210 220 pF1KE3 LRDV-RRGRDLEQILTQYTTFVKPAFEEFCLPTKKYADVIIPRGVDNMVAINLIVQHIQD ::. .::::.: .. ::. ::::.:... :: . ::...::: : :::.:::::... XP_016 RRDISERGRDIEGVIKQYNKFVKPSFDQYIQPTMRLADIVVPRGSGNTVAIDLIVQHVHS 230 240 250 260 270 280 230 240 250 260 270 pF1KE3 ILNGDICKWHRGGSNGRSYKRTFSEPGDHPGMLTSGKRSHLESSSRPH :. .: XP_016 QLEERKLRWDMAALASAHQCHPLPRTLSVLKSTPQVRGMHTIIRDKETSRDEFIFYSKRL 290 300 310 320 330 340 >>XP_016883387 (OMIM: 610866) PREDICTED: uridine-cytidin (548 aa) initn: 700 init1: 426 opt: 702 Z-score: 859.6 bits: 167.8 E(85289): 3.9e-41 Smith-Waterman score: 702; 47.9% identity (77.2% similar) in 219 aa overlap (21-238:95-306) 10 20 30 40 50 pF1KE3 MASAGGEDCESPAPEADRPHQRPFLIGVSGGTASGKSTVCEKIMELLGQN .. : ::..::.::::.:: . :.: : XP_016 KSEPPLLRTSKRTIYTAGRPPWYNEHGTQSKEAFAIGLGGGSASGKTTVARMIIEAL--- 70 80 90 100 110 120 60 70 80 90 100 110 pF1KE3 EVEQRQRKVVILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVEGKTV .: ::.::.: :::::: .:. .: ....::::::::: ::. :::.. .::.: XP_016 DVPW----VVLLSMDSFYKVLTEQQQEQAAHNNFNFDHPDAFDFDLIISTLKKLKQGKSV 130 140 150 160 170 120 130 140 150 160 170 pF1KE3 EVPTYDFVTHSRLPETTVVYPADVVLFEGILVFYSQEIRDMFHLRLFVDTDSDVRLSRRV .:: :::.:::: . ..: :.:..::::..: .. . ... ...:::::::.:: ::. XP_016 KVPIYDFTTHSRKKDWKTLYGANVIIFEGIMAFADKTLLELLDMKIFVDTDSDIRLVRRL 180 190 200 210 220 230 180 190 200 210 220 pF1KE3 LRDV-RRGRDLEQILTQYTTFVKPAFEEFCLPTKKYADVIIPRGVDNMVAINLIVQHIQD ::. .::::.: .. ::. ::::.:... :: . ::...::: : :::.:::::... XP_016 RRDISERGRDIEGVIKQYNKFVKPSFDQYIQPTMRLADIVVPRGSGNTVAIDLIVQHVHS 240 250 260 270 280 290 230 240 250 260 270 pF1KE3 ILNGDICKWHRGGSNGRSYKRTFSEPGDHPGMLTSGKRSHLESSSRPH :. .: XP_016 QLEERKLRWDMAALASAHQCHPLPRTLSVLKSTPQVRGMHTIIRDKETSRDEFIFYSKRL 300 310 320 330 340 350 277 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 15:39:41 2016 done: Sun Nov 6 15:39:42 2016 Total Scan time: 6.650 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]