FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1580, 85 aa 1>>>pF1KE1580 85 - 85 aa - 85 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.9385+/-0.000231; mu= 11.6528+/- 0.015 mean_var=68.0778+/-13.538, 0's: 0 Z-trim(122.2): 5 B-trim: 0 in 0/55 Lambda= 0.155443 statistics sampled from 39987 (39992) to 39987 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.832), E-opt: 0.2 (0.469), width: 16 Scan time: 4.570 The best scores are: opt bits E(85289) XP_016870064 (OMIM: 614533) PREDICTED: anaphase-pr ( 85) 559 132.6 7.6e-32 XP_016870063 (OMIM: 614533) PREDICTED: anaphase-pr ( 85) 559 132.6 7.6e-32 XP_016870062 (OMIM: 614533) PREDICTED: anaphase-pr ( 85) 559 132.6 7.6e-32 NP_644815 (OMIM: 614533) anaphase-promoting comple ( 85) 559 132.6 7.6e-32 >>XP_016870064 (OMIM: 614533) PREDICTED: anaphase-promot (85 aa) initn: 559 init1: 559 opt: 559 Z-score: 692.7 bits: 132.6 E(85289): 7.6e-32 Smith-Waterman score: 559; 100.0% identity (100.0% similar) in 85 aa overlap (1-85:1-85) 10 20 30 40 50 60 pF1KE1 MLRRKPTRLELKLDDIEEFENIRKDLETRKKQKEDVEVVGGSDGEGAIGLSSDPKSREQM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MLRRKPTRLELKLDDIEEFENIRKDLETRKKQKEDVEVVGGSDGEGAIGLSSDPKSREQM 10 20 30 40 50 60 70 80 pF1KE1 INDRIGYKPQPKPNNRSSQFGSLEF ::::::::::::::::::::::::: XP_016 INDRIGYKPQPKPNNRSSQFGSLEF 70 80 >>XP_016870063 (OMIM: 614533) PREDICTED: anaphase-promot (85 aa) initn: 559 init1: 559 opt: 559 Z-score: 692.7 bits: 132.6 E(85289): 7.6e-32 Smith-Waterman score: 559; 100.0% identity (100.0% similar) in 85 aa overlap (1-85:1-85) 10 20 30 40 50 60 pF1KE1 MLRRKPTRLELKLDDIEEFENIRKDLETRKKQKEDVEVVGGSDGEGAIGLSSDPKSREQM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MLRRKPTRLELKLDDIEEFENIRKDLETRKKQKEDVEVVGGSDGEGAIGLSSDPKSREQM 10 20 30 40 50 60 70 80 pF1KE1 INDRIGYKPQPKPNNRSSQFGSLEF ::::::::::::::::::::::::: XP_016 INDRIGYKPQPKPNNRSSQFGSLEF 70 80 >>XP_016870062 (OMIM: 614533) PREDICTED: anaphase-promot (85 aa) initn: 559 init1: 559 opt: 559 Z-score: 692.7 bits: 132.6 E(85289): 7.6e-32 Smith-Waterman score: 559; 100.0% identity (100.0% similar) in 85 aa overlap (1-85:1-85) 10 20 30 40 50 60 pF1KE1 MLRRKPTRLELKLDDIEEFENIRKDLETRKKQKEDVEVVGGSDGEGAIGLSSDPKSREQM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MLRRKPTRLELKLDDIEEFENIRKDLETRKKQKEDVEVVGGSDGEGAIGLSSDPKSREQM 10 20 30 40 50 60 70 80 pF1KE1 INDRIGYKPQPKPNNRSSQFGSLEF ::::::::::::::::::::::::: XP_016 INDRIGYKPQPKPNNRSSQFGSLEF 70 80 >>NP_644815 (OMIM: 614533) anaphase-promoting complex su (85 aa) initn: 559 init1: 559 opt: 559 Z-score: 692.7 bits: 132.6 E(85289): 7.6e-32 Smith-Waterman score: 559; 100.0% identity (100.0% similar) in 85 aa overlap (1-85:1-85) 10 20 30 40 50 60 pF1KE1 MLRRKPTRLELKLDDIEEFENIRKDLETRKKQKEDVEVVGGSDGEGAIGLSSDPKSREQM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_644 MLRRKPTRLELKLDDIEEFENIRKDLETRKKQKEDVEVVGGSDGEGAIGLSSDPKSREQM 10 20 30 40 50 60 70 80 pF1KE1 INDRIGYKPQPKPNNRSSQFGSLEF ::::::::::::::::::::::::: NP_644 INDRIGYKPQPKPNNRSSQFGSLEF 70 80 85 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 15:43:57 2016 done: Sun Nov 6 15:43:57 2016 Total Scan time: 4.570 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]