FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1580, 85 aa 1>>>pF1KE1580 85 - 85 aa - 85 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.4551+/-0.0005; mu= 8.4313+/- 0.030 mean_var=64.2337+/-12.522, 0's: 0 Z-trim(114.8): 2 B-trim: 0 in 0/53 Lambda= 0.160027 statistics sampled from 15366 (15367) to 15366 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.83), E-opt: 0.2 (0.472), width: 16 Scan time: 1.350 The best scores are: opt bits E(32554) CCDS6790.1 CDC26 gene_id:246184|Hs108|chr9 ( 85) 559 136.2 2.3e-33 >>CCDS6790.1 CDC26 gene_id:246184|Hs108|chr9 (85 aa) initn: 559 init1: 559 opt: 559 Z-score: 712.6 bits: 136.2 E(32554): 2.3e-33 Smith-Waterman score: 559; 100.0% identity (100.0% similar) in 85 aa overlap (1-85:1-85) 10 20 30 40 50 60 pF1KE1 MLRRKPTRLELKLDDIEEFENIRKDLETRKKQKEDVEVVGGSDGEGAIGLSSDPKSREQM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS67 MLRRKPTRLELKLDDIEEFENIRKDLETRKKQKEDVEVVGGSDGEGAIGLSSDPKSREQM 10 20 30 40 50 60 70 80 pF1KE1 INDRIGYKPQPKPNNRSSQFGSLEF ::::::::::::::::::::::::: CCDS67 INDRIGYKPQPKPNNRSSQFGSLEF 70 80 85 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 15:43:56 2016 done: Sun Nov 6 15:43:56 2016 Total Scan time: 1.350 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]