FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2724, 199 aa 1>>>pF1KE2724 199 - 199 aa - 199 aa Library: /omim/omim.rfq.tfa 64536644 residues in 91102 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.9454+/-0.000312; mu= 15.2228+/- 0.019 mean_var=59.6341+/-12.169, 0's: 0 Z-trim(115.9): 36 B-trim: 1289 in 1/53 Lambda= 0.166084 statistics sampled from 27527 (27563) to 27527 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.713), E-opt: 0.2 (0.303), width: 16 Scan time: 2.710 The best scores are: opt bits E(91102) XP_006717226 (OMIM: 608704) nicotinamide riboside ( 199) 1339 328.7 3.9e-90 XP_016870359 (OMIM: 608704) nicotinamide riboside ( 199) 1339 328.7 3.9e-90 NP_060351 (OMIM: 608704) nicotinamide riboside kin ( 199) 1339 328.7 3.9e-90 NP_001317608 (OMIM: 608704) nicotinamide riboside ( 203) 1284 315.6 3.7e-86 NP_001317607 (OMIM: 608704) nicotinamide riboside ( 203) 1284 315.6 3.7e-86 XP_016870358 (OMIM: 608704) nicotinamide riboside ( 203) 1284 315.6 3.7e-86 XP_011517119 (OMIM: 608704) nicotinamide riboside ( 203) 1284 315.6 3.7e-86 XP_024303358 (OMIM: 608704) nicotinamide riboside ( 203) 1284 315.6 3.7e-86 XP_016870357 (OMIM: 608704) nicotinamide riboside ( 203) 1284 315.6 3.7e-86 NP_733778 (OMIM: 608705) nicotinamide riboside kin ( 230) 715 179.3 4.5e-45 NP_001276046 (OMIM: 608705) nicotinamide riboside ( 235) 695 174.5 1.3e-43 NP_001121075 (OMIM: 608704) nicotinamide riboside ( 175) 679 170.6 1.4e-42 XP_016870363 (OMIM: 608704) nicotinamide riboside ( 175) 679 170.6 1.4e-42 XP_016870361 (OMIM: 608704) nicotinamide riboside ( 179) 624 157.4 1.3e-38 XP_024303360 (OMIM: 608704) nicotinamide riboside ( 179) 624 157.4 1.3e-38 XP_016870360 (OMIM: 608704) nicotinamide riboside ( 179) 624 157.4 1.3e-38 XP_024303359 (OMIM: 608704) nicotinamide riboside ( 179) 624 157.4 1.3e-38 XP_016870362 (OMIM: 608704) nicotinamide riboside ( 179) 624 157.4 1.3e-38 XP_016882086 (OMIM: 608705) nicotinamide riboside ( 145) 462 118.5 5.5e-27 XP_006722789 (OMIM: 608705) nicotinamide riboside ( 150) 442 113.7 1.6e-25 XP_024307220 (OMIM: 608705) nicotinamide riboside ( 206) 340 89.4 4.6e-18 XP_006722788 (OMIM: 608705) nicotinamide riboside ( 211) 254 68.8 7.5e-12 >>XP_006717226 (OMIM: 608704) nicotinamide riboside kina (199 aa) initn: 1339 init1: 1339 opt: 1339 Z-score: 1739.6 bits: 328.7 E(91102): 3.9e-90 Smith-Waterman score: 1339; 100.0% identity (100.0% similar) in 199 aa overlap (1-199:1-199) 10 20 30 40 50 60 pF1KE2 MKTFIIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYDVLEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 MKTFIIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYDVLEA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 LNMEKMMSAISCWMESARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSYFLTI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 LNMEKMMSAISCWMESARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSYFLTI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 PYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEEDLFLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 PYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEEDLFLQ 130 140 150 160 170 180 190 pF1KE2 VYEDLIQELAKQKCLQVTA ::::::::::::::::::: XP_006 VYEDLIQELAKQKCLQVTA 190 >>XP_016870359 (OMIM: 608704) nicotinamide riboside kina (199 aa) initn: 1339 init1: 1339 opt: 1339 Z-score: 1739.6 bits: 328.7 E(91102): 3.9e-90 Smith-Waterman score: 1339; 100.0% identity (100.0% similar) in 199 aa overlap (1-199:1-199) 10 20 30 40 50 60 pF1KE2 MKTFIIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYDVLEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MKTFIIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYDVLEA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 LNMEKMMSAISCWMESARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSYFLTI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LNMEKMMSAISCWMESARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSYFLTI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 PYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEEDLFLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEEDLFLQ 130 140 150 160 170 180 190 pF1KE2 VYEDLIQELAKQKCLQVTA ::::::::::::::::::: XP_016 VYEDLIQELAKQKCLQVTA 190 >>NP_060351 (OMIM: 608704) nicotinamide riboside kinase (199 aa) initn: 1339 init1: 1339 opt: 1339 Z-score: 1739.6 bits: 328.7 E(91102): 3.9e-90 Smith-Waterman score: 1339; 100.0% identity (100.0% similar) in 199 aa overlap (1-199:1-199) 10 20 30 40 50 60 pF1KE2 MKTFIIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYDVLEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 MKTFIIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYDVLEA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 LNMEKMMSAISCWMESARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSYFLTI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 LNMEKMMSAISCWMESARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSYFLTI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 PYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEEDLFLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 PYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEEDLFLQ 130 140 150 160 170 180 190 pF1KE2 VYEDLIQELAKQKCLQVTA ::::::::::::::::::: NP_060 VYEDLIQELAKQKCLQVTA 190 >>NP_001317608 (OMIM: 608704) nicotinamide riboside kina (203 aa) initn: 1284 init1: 1284 opt: 1284 Z-score: 1668.3 bits: 315.6 E(91102): 3.7e-86 Smith-Waterman score: 1284; 99.5% identity (99.5% similar) in 192 aa overlap (8-199:12-203) 10 20 30 40 50 pF1KE2 MKTFIIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYD :: :::::::::::::::::::::::::::::::::::::::::::::: NP_001 MGKRRHRRGNVISCVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYD 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE2 VLEALNMEKMMSAISCWMESARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VLEALNMEKMMSAISCWMESARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSY 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE2 FLTIPYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 FLTIPYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEED 130 140 150 160 170 180 180 190 pF1KE2 LFLQVYEDLIQELAKQKCLQVTA ::::::::::::::::::::::: NP_001 LFLQVYEDLIQELAKQKCLQVTA 190 200 >>NP_001317607 (OMIM: 608704) nicotinamide riboside kina (203 aa) initn: 1284 init1: 1284 opt: 1284 Z-score: 1668.3 bits: 315.6 E(91102): 3.7e-86 Smith-Waterman score: 1284; 99.5% identity (99.5% similar) in 192 aa overlap (8-199:12-203) 10 20 30 40 50 pF1KE2 MKTFIIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYD :: :::::::::::::::::::::::::::::::::::::::::::::: NP_001 MGKRRHRRGNVISCVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYD 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE2 VLEALNMEKMMSAISCWMESARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VLEALNMEKMMSAISCWMESARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSY 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE2 FLTIPYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 FLTIPYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEED 130 140 150 160 170 180 180 190 pF1KE2 LFLQVYEDLIQELAKQKCLQVTA ::::::::::::::::::::::: NP_001 LFLQVYEDLIQELAKQKCLQVTA 190 200 >>XP_016870358 (OMIM: 608704) nicotinamide riboside kina (203 aa) initn: 1284 init1: 1284 opt: 1284 Z-score: 1668.3 bits: 315.6 E(91102): 3.7e-86 Smith-Waterman score: 1284; 99.5% identity (99.5% similar) in 192 aa overlap (8-199:12-203) 10 20 30 40 50 pF1KE2 MKTFIIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYD :: :::::::::::::::::::::::::::::::::::::::::::::: XP_016 MGKRRHRRGNVISCVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYD 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE2 VLEALNMEKMMSAISCWMESARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VLEALNMEKMMSAISCWMESARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSY 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE2 FLTIPYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 FLTIPYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEED 130 140 150 160 170 180 180 190 pF1KE2 LFLQVYEDLIQELAKQKCLQVTA ::::::::::::::::::::::: XP_016 LFLQVYEDLIQELAKQKCLQVTA 190 200 >>XP_011517119 (OMIM: 608704) nicotinamide riboside kina (203 aa) initn: 1284 init1: 1284 opt: 1284 Z-score: 1668.3 bits: 315.6 E(91102): 3.7e-86 Smith-Waterman score: 1284; 99.5% identity (99.5% similar) in 192 aa overlap (8-199:12-203) 10 20 30 40 50 pF1KE2 MKTFIIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYD :: :::::::::::::::::::::::::::::::::::::::::::::: XP_011 MGKRRHRRGNVISCVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYD 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE2 VLEALNMEKMMSAISCWMESARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 VLEALNMEKMMSAISCWMESARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSY 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE2 FLTIPYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 FLTIPYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEED 130 140 150 160 170 180 180 190 pF1KE2 LFLQVYEDLIQELAKQKCLQVTA ::::::::::::::::::::::: XP_011 LFLQVYEDLIQELAKQKCLQVTA 190 200 >>XP_024303358 (OMIM: 608704) nicotinamide riboside kina (203 aa) initn: 1284 init1: 1284 opt: 1284 Z-score: 1668.3 bits: 315.6 E(91102): 3.7e-86 Smith-Waterman score: 1284; 99.5% identity (99.5% similar) in 192 aa overlap (8-199:12-203) 10 20 30 40 50 pF1KE2 MKTFIIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYD :: :::::::::::::::::::::::::::::::::::::::::::::: XP_024 MGKRRHRRGNVISCVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYD 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE2 VLEALNMEKMMSAISCWMESARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_024 VLEALNMEKMMSAISCWMESARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSY 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE2 FLTIPYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_024 FLTIPYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEED 130 140 150 160 170 180 180 190 pF1KE2 LFLQVYEDLIQELAKQKCLQVTA ::::::::::::::::::::::: XP_024 LFLQVYEDLIQELAKQKCLQVTA 190 200 >>XP_016870357 (OMIM: 608704) nicotinamide riboside kina (203 aa) initn: 1284 init1: 1284 opt: 1284 Z-score: 1668.3 bits: 315.6 E(91102): 3.7e-86 Smith-Waterman score: 1284; 99.5% identity (99.5% similar) in 192 aa overlap (8-199:12-203) 10 20 30 40 50 pF1KE2 MKTFIIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYD :: :::::::::::::::::::::::::::::::::::::::::::::: XP_016 MGKRRHRRGNVISCVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYD 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE2 VLEALNMEKMMSAISCWMESARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VLEALNMEKMMSAISCWMESARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSY 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE2 FLTIPYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 FLTIPYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEED 130 140 150 160 170 180 180 190 pF1KE2 LFLQVYEDLIQELAKQKCLQVTA ::::::::::::::::::::::: XP_016 LFLQVYEDLIQELAKQKCLQVTA 190 200 >>NP_733778 (OMIM: 608705) nicotinamide riboside kinase (230 aa) initn: 697 init1: 434 opt: 715 Z-score: 930.7 bits: 179.3 E(91102): 4.5e-45 Smith-Waterman score: 715; 57.0% identity (77.7% similar) in 193 aa overlap (1-189:1-191) 10 20 30 40 50 60 pF1KE2 MKTFIIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYDVLEA :: .:.::.:.::.:::::...: . :::: :: :::::::...: . ..:: :.::::. NP_733 MK-LIVGIGGMTNGGKTTLTNSLLRALPNCCVIHQDDFFKPQDQIAVGEDGFKQWDVLES 10 20 30 40 50 70 80 90 100 110 pF1KE2 LNMEKMMSAISCWMES----ARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSY :.:: :..... :. : :: ::. : : . ::..:::::..:::: ...: : NP_733 LDMEAMLDTVQAWLSSPQKFARAHGVSV-QPEASDTHILLLEGFLLYSYKPLVDLYSRRY 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE2 FLTIPYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEED :::.:::::: ::::: : :: :: ::::::::: ::::::. ::::::: ::.:. NP_733 FLTVPYEECKWRRSTRNYTVPDPPGLFDGHVWPMYQKYRQEMEANGVEVVYLDGMKSREE 120 130 140 150 160 170 180 190 pF1KE2 LFLQVYEDLIQELAKQKCLQVTA :: .: ::. . : NP_733 LFREVLEDIQNSLLNRSQESAPSPARPARTQGPGRGCGHRTARPAASQQDSM 180 190 200 210 220 230 199 residues in 1 query sequences 64536644 residues in 91102 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Wed Jun 13 19:13:02 2018 done: Wed Jun 13 19:13:02 2018 Total Scan time: 2.710 Total Display time: 0.040 Function used was FASTA [36.3.4 Apr, 2011]